Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2159468Family d.15.1.0: automated matches [191343] (1 protein)
    not a true family
  6. 2159469Protein automated matches [190233] (22 species)
    not a true protein
  7. 2159501Species Human (Homo sapiens) [TaxId:9606] [187090] (78 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1yx5:
  2. Domain(s) for 1yx6:
  3. Domain(s) for 2bf8:
  4. Domain(s) for 2dhz:
  5. Domain(s) for 2dzi:
  6. Domain(s) for 2faz:
  7. Domain(s) for 2he7:
  8. Domain(s) for 2hj8:
  9. Domain(s) for 2iy0:
  10. Domain(s) for 2iy1:
    1. 2159545Domain d2iy1b_: 2iy1 B: [137788]
      Other proteins in same PDB: d2iy1a_, d2iy1c_
      automated match to d2ckhb1
      mutant
    2. 2159546Domain d2iy1d_: 2iy1 D: [137789]
      Other proteins in same PDB: d2iy1a_, d2iy1c_
      automated match to d2ckhb1
      mutant
  11. Domain(s) for 2jxx:
  12. Domain(s) for 2kdb:
  13. Domain(s) for 2klc:
  14. Domain(s) for 2l05:
  15. Domain(s) for 2l7r:
  16. Domain(s) for 2ld9:
  17. Domain(s) for 2mbe:
  18. Domain(s) for 2n9p:
  19. Domain(s) for 2ncn:
  20. Domain(s) for 2uyz:
  21. Domain(s) for 2vrr:
  22. Domain(s) for 3dbs:
  23. Domain(s) for 3kuz:
    1. 2297572Domain d3kuzb1: 3kuz B:1198-1305 [340873]
      Other proteins in same PDB: d3kuza2, d3kuzb2
      automated match to d3q3ja_
      complexed with unx
    2. 2297574Domain d3kuza1: 3kuz A:1198-1305 [340875]
      Other proteins in same PDB: d3kuza2, d3kuzb2
      automated match to d3q3ja_
      complexed with unx
  24. Domain(s) for 3ny5:
    1. 2159512Domain d3ny5a1: 3ny5 A:153-233 [182620]
      Other proteins in same PDB: d3ny5a2, d3ny5b2, d3ny5c2, d3ny5d2
      automated match to d1rfaa_
    2. 2159513Domain d3ny5b1: 3ny5 B:153-235 [182621]
      Other proteins in same PDB: d3ny5a2, d3ny5b2, d3ny5c2, d3ny5d2
      automated match to d1rfaa_
    3. 2159514Domain d3ny5c1: 3ny5 C:153-235 [182622]
      Other proteins in same PDB: d3ny5a2, d3ny5b2, d3ny5c2, d3ny5d2
      automated match to d1rfaa_
    4. 2159515Domain d3ny5d1: 3ny5 D:153-232 [182623]
      Other proteins in same PDB: d3ny5a2, d3ny5b2, d3ny5c2, d3ny5d2
      automated match to d1rfaa_
  25. Domain(s) for 3phx:
  26. Domain(s) for 3pz7:
  27. Domain(s) for 3q3j:
  28. Domain(s) for 3qij:
    1. 2159507Domain d3qija1: 3qij A:211-290 [248902]
      Other proteins in same PDB: d3qija2, d3qija3, d3qija4, d3qijb2, d3qijb3, d3qijb4
      automated match to d1gg3a3
      complexed with unx
    2. 2159508Domain d3qijb1: 3qij B:211-290 [248905]
      Other proteins in same PDB: d3qija2, d3qija3, d3qija4, d3qijb2, d3qijb3, d3qijb4
      automated match to d1gg3a3
      complexed with unx
  29. Domain(s) for 3r66:
    1. 2159542Domain d3r66c1: 3r66 C:4-78 [233409]
      Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c2, d3r66d2
      automated match to d1z2ma1
    2. 2159543Domain d3r66d1: 3r66 D:4-78 [233410]
      Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c2, d3r66d2
      automated match to d1z2ma1
  30. Domain(s) for 3rd2:
  31. Domain(s) for 3sdl:
    1. 2159520Domain d3sdlc1: 3sdl C:4-78 [239724]
      Other proteins in same PDB: d3sdla_, d3sdlb_, d3sdlc2, d3sdld2
      automated match to d3r66c1
    2. 2159521Domain d3sdld1: 3sdl D:4-78 [239726]
      Other proteins in same PDB: d3sdla_, d3sdlb_, d3sdlc2, d3sdld2
      automated match to d3r66c1
  32. Domain(s) for 3u8z:
    1. 2159533Domain d3u8za1: 3u8z A:20-103 [250151]
      Other proteins in same PDB: d3u8za2, d3u8zb2, d3u8zc2, d3u8zc3, d3u8zd2
      automated match to d1gc7a3
    2. 2159534Domain d3u8zb1: 3u8z B:20-103 [250153]
      Other proteins in same PDB: d3u8za2, d3u8zb2, d3u8zc2, d3u8zc3, d3u8zd2
      automated match to d1gc7a3
    3. 2159535Domain d3u8zc1: 3u8z C:20-103 [250155]
      Other proteins in same PDB: d3u8za2, d3u8zb2, d3u8zc2, d3u8zc3, d3u8zd2
      automated match to d1gc7a3
    4. 2159536Domain d3u8zd1: 3u8z D:20-103 [250158]
      Other proteins in same PDB: d3u8za2, d3u8zb2, d3u8zc2, d3u8zc3, d3u8zd2
      automated match to d1gc7a3
  33. Domain(s) for 3vvw:
  34. Domain(s) for 3wam:
  35. Domain(s) for 3zvv:
  36. Domain(s) for 3zw3:
  37. Domain(s) for 4anu:
  38. Domain(s) for 4anv:
  39. Domain(s) for 4anw:
  40. Domain(s) for 4anx:
  41. Domain(s) for 4e71:
  42. Domain(s) for 4e74:
  43. Domain(s) for 4gdk:
    1. 2159529Domain d4gdka_: 4gdk A: [221855]
      automated match to d4gdla_
      complexed with na
    2. 2159530Domain d4gdkd_: 4gdk D: [221856]
      automated match to d4gdla_
      complexed with na
  44. Domain(s) for 4gdl:
  45. Domain(s) for 4hle:
  46. Domain(s) for 4j6i:
  47. Domain(s) for 4naw:
    1. 2159522Domain d4nawa_: 4naw A: [228876]
      automated match to d4gdla_
      complexed with na, so4
    2. 2159523Domain d4nawe_: 4naw E: [228875]
      automated match to d4gdla_
      complexed with na, so4
    3. 2159524Domain d4nawi_: 4naw I: [228878]
      automated match to d4gdla_
      complexed with na, so4
    4. 2159525Domain d4nawm_: 4naw M: [228877]
      automated match to d4gdla_
      complexed with na, so4
  48. Domain(s) for 4npn:
  49. Domain(s) for 4ny0:
    1. 2159553Domain d4ny0a1: 4ny0 A:34-130 [254031]
      Other proteins in same PDB: d4ny0a2, d4ny0a3, d4ny0b2, d4ny0b3, d4ny0d2, d4ny0d3
      automated match to d2al6b3
    2. 2159554Domain d4ny0b1: 4ny0 B:34-130 [254034]
      Other proteins in same PDB: d4ny0a2, d4ny0a3, d4ny0b2, d4ny0b3, d4ny0d2, d4ny0d3
      automated match to d2al6b3
    3. 2159555Domain d4ny0d1: 4ny0 D:34-130 [254037]
      Other proteins in same PDB: d4ny0a2, d4ny0a3, d4ny0b2, d4ny0b3, d4ny0d2, d4ny0d3
      automated match to d2al6b3
  50. Domain(s) for 4rma:
    1. 2159518Domain d4rmaa1: 4rma A:2-87 [309470]
      Other proteins in same PDB: d4rmaa2, d4rmaa3, d4rmab2, d4rmab3
      automated match to d1gc7a3
      complexed with so4
    2. 2159519Domain d4rmab1: 4rma B:2-87 [309473]
      Other proteins in same PDB: d4rmaa2, d4rmaa3, d4rmab2, d4rmab3
      automated match to d1gc7a3
      complexed with so4
  51. Domain(s) for 4urk:
  52. Domain(s) for 4wip:
    1. 2159557Domain d4wipa_: 4wip A: [272733]
      automated match to d1wspb_
      complexed with 1pe
    2. 2159558Domain d4wipb_: 4wip B: [272738]
      automated match to d1wspb_
      complexed with 1pe
    3. 2159559Domain d4wipc_: 4wip C: [272739]
      automated match to d1wspb_
      complexed with 1pe
  53. Domain(s) for 4xkl:
    1. 2159540Domain d4xkla1: 4xkl A:1-76 [279369]
      Other proteins in same PDB: d4xkla2, d4xklc2
      automated match to d4nnjb_
      complexed with act, gol, zn
    2. 2159541Domain d4xklc1: 4xkl C:1-76 [279370]
      Other proteins in same PDB: d4xkla2, d4xklc2
      automated match to d4nnjb_
      complexed with act, gol, zn
  54. Domain(s) for 4zri:
    1. 2159560Domain d4zria1: 4zri A:20-103 [274140]
      Other proteins in same PDB: d4zria2, d4zria3, d4zrib2, d4zrib3
      automated match to d1h4ra3
    2. 2159561Domain d4zrib1: 4zri B:21-103 [274137]
      Other proteins in same PDB: d4zria2, d4zria3, d4zrib2, d4zrib3
      automated match to d1h4ra3
  55. Domain(s) for 4zrj:
  56. Domain(s) for 5aek:
    1. 2269754Domain d5aekf_: 5aek F: [313059]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    2. 2269777Domain d5aekr_: 5aek R: [313082]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    3. 2269789Domain d5aekh_: 5aek H: [313094]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    4. 2269817Domain d5aekp_: 5aek P: [313122]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    5. 2270102Domain d5aekj_: 5aek J: [313407]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    6. 2270105Domain d5aekt_: 5aek T: [313410]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    7. 2270115Domain d5aekl_: 5aek L: [313420]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    8. 2270121Domain d5aekb_: 5aek B: [313426]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    9. 2270122Domain d5aekv_: 5aek V: [313427]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    10. 2270128Domain d5aekx_: 5aek X: [313433]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    11. 2270130Domain d5aekn_: 5aek N: [313435]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
    12. 2270272Domain d5aekd_: 5aek D: [313577]
      Other proteins in same PDB: d5aeka_, d5aekc_, d5aeke_, d5aekg_, d5aeki_, d5aekk_, d5aekm_, d5aeko_, d5aekq_, d5aeks_, d5aeku_, d5aekw_
      automated match to d2vrrb_
  57. Domain(s) for 5b83:
    1. 2278844Domain d5b83a1: 5b83 A:1-76 [322145]
      automated match to d2k39a_
    2. 2278847Domain d5b83a2: 5b83 A:77-152 [322148]
      automated match to d2k39a_
    3. 2278848Domain d5b83a3: 5b83 A:153-228 [322149]
      automated match to d2k39a_
    4. 2278849Domain d5b83a4: 5b83 A:229-302 [322150]
      automated match to d2k39a_
    5. 2278854Domain d5b83d1: 5b83 D:1-76 [322155]
      automated match to d2k39a_
    6. 2278855Domain d5b83d2: 5b83 D:77-152 [322156]
      automated match to d2k39a_
    7. 2278856Domain d5b83d3: 5b83 D:153-228 [322157]
      automated match to d2k39a_
    8. 2278858Domain d5b83d4: 5b83 D:229-300 [322159]
      automated match to d2k39a_
  58. Domain(s) for 5dps:
    1. 2279961Domain d5dpsb_: 5dps B: [323262]
      automated match to d3wanb_
    2. 2279986Domain d5dpsa_: 5dps A: [323287]
      automated match to d3wanb_
    3. 2280007Domain d5dpsc_: 5dps C: [323308]
      automated match to d3wanb_
  59. Domain(s) for 5dpt:
    1. 2279935Domain d5dptb_: 5dpt B: [323236]
      automated match to d3wanb_
      complexed with mpd
    2. 2280183Domain d5dpta_: 5dpt A: [323484]
      automated match to d3wanb_
      complexed with mpd
  60. Domain(s) for 5g2n:
  61. Domain(s) for 5g55:
  62. Domain(s) for 5h07:
    1. 2287341Domain d5h07a1: 5h07 A:1-76 [330642]
      automated match to d2k39a_
    2. 2287342Domain d5h07a2: 5h07 A:101-176 [330643]
      automated match to d2k39a_
    3. 2287343Domain d5h07a3: 5h07 A:201-271 [330644]
      automated match to d2k39a_
  63. Domain(s) for 5hps:
  64. Domain(s) for 5hpt:
    1. 2271469Domain d5hpte_: 5hpt E: [314770]
      Other proteins in same PDB: d5hptc_, d5hptf_
      automated match to d3b1lx_
    2. 2271516Domain d5hptb_: 5hpt B: [314817]
      Other proteins in same PDB: d5hptc_, d5hptf_
      automated match to d3b1lx_
    3. 2271545Domain d5hpth_: 5hpt H: [314846]
      Other proteins in same PDB: d5hptc_, d5hptf_
      automated match to d3b1lx_
  65. Domain(s) for 5j17:
  66. Domain(s) for 5j18:
  67. Domain(s) for 5j2r:
  68. Domain(s) for 5jg6:
    1. 2275239Domain d5jg6b1: 5jg6 B:0-75 [318540]
      Other proteins in same PDB: d5jg6b2
      automated match to d5hpte_
      complexed with zn
    2. 2275316Domain d5jg6c_: 5jg6 C: [318617]
      Other proteins in same PDB: d5jg6b2
      automated match to d5hpte_
      complexed with zn
  69. Domain(s) for 5jze:
    1. 2280922Domain d5jzed_: 5jze D: [324223]
      automated match to d3phxb_
      complexed with aye, flc
    2. 2280923Domain d5jzeb_: 5jze B: [324224]
      automated match to d3phxb_
      complexed with aye, flc
  70. Domain(s) for 5m93:
    1. 2283919Domain d5m93a_: 5m93 A: [327220]
      Other proteins in same PDB: d5m93b2, d5m93c2
      automated match to d1mg8a_
      complexed with rib, so4
    2. 2283921Domain d5m93b1: 5m93 B:0-73 [327222]
      Other proteins in same PDB: d5m93b2, d5m93c2
      automated match to d1mg8a_
      complexed with rib, so4
    3. 2283983Domain d5m93c1: 5m93 C:0-74 [327284]
      Other proteins in same PDB: d5m93b2, d5m93c2
      automated match to d1mg8a_
      complexed with rib, so4
  71. Domain(s) for 5tl6:
    1. 2290529Domain d5tl6a_: 5tl6 A: [333830]
      Other proteins in same PDB: d5tl6b2, d5tl6d2
      automated match to d3phxb_
      complexed with so4, zn
    2. 2290544Domain d5tl6c_: 5tl6 C: [333845]
      Other proteins in same PDB: d5tl6b2, d5tl6d2
      automated match to d3phxb_
      complexed with so4, zn
  72. Domain(s) for 5tl7:
    1. 2290551Domain d5tl7a_: 5tl7 A: [333852]
      Other proteins in same PDB: d5tl7b2, d5tl7b3, d5tl7d2
      automated match to d3phxb_
      complexed with zn
    2. 2290561Domain d5tl7c_: 5tl7 C: [333862]
      Other proteins in same PDB: d5tl7b2, d5tl7b3, d5tl7d2
      automated match to d3phxb_
      complexed with zn
  73. Domain(s) for 5v6a:
  74. Domain(s) for 5w8t:
    1. 2296386Domain d5w8tb_: 5w8t B: [339687]
      Other proteins in same PDB: d5w8ta2, d5w8tc2
      automated match to d3phxb_
      complexed with aye, mpd, zn
    2. 2296389Domain d5w8td_: 5w8t D: [339690]
      Other proteins in same PDB: d5w8ta2, d5w8tc2
      automated match to d3phxb_
      complexed with aye, mpd, zn
  75. Domain(s) for 5w8u:
    1. 2296378Domain d5w8ub_: 5w8u B: [339679]
      Other proteins in same PDB: d5w8ua2, d5w8uc2
      automated match to d3phxb_
      complexed with aye, mpd, zn
    2. 2296390Domain d5w8ud_: 5w8u D: [339691]
      Other proteins in same PDB: d5w8ua2, d5w8uc2
      automated match to d3phxb_
      complexed with aye, mpd, zn
  76. Domain(s) for 5x3p:
    1. 2288903Domain d5x3pb_: 5x3p B: [332204]
      automated match to d3r3mb_
    2. 2288907Domain d5x3pa_: 5x3p A: [332208]
      automated match to d3r3mb_
    3. 2288929Domain d5x3pc_: 5x3p C: [332230]
      automated match to d3r3mb_
  77. Domain(s) for 5x4l:
    1. 2288925Domain d5x4lc_: 5x4l C: [332226]
      Other proteins in same PDB: d5x4la1, d5x4la2, d5x4la3, d5x4lb1, d5x4lb2
      automated match to d3r3mb_
    2. 2288947Domain d5x4ld_: 5x4l D: [332248]
      Other proteins in same PDB: d5x4la1, d5x4la2, d5x4la3, d5x4lb1, d5x4lb2
      automated match to d3r3mb_
  78. Domain(s) for 5y3b:
    1. 2295539Domain d5y3bc1: 5y3b C:388-469 [338840]
      Other proteins in same PDB: d5y3bc2, d5y3bf2
      automated match to d4wipc_
    2. 2295543Domain d5y3bd_: 5y3b D: [338844]
      Other proteins in same PDB: d5y3bc2, d5y3bf2
      automated match to d4wipc_
    3. 2295548Domain d5y3bf1: 5y3b F:388-470 [338849]
      Other proteins in same PDB: d5y3bc2, d5y3bf2
      automated match to d4wipc_
    4. 2295555Domain d5y3bb_: 5y3b B: [338856]
      Other proteins in same PDB: d5y3bc2, d5y3bf2
      automated match to d4wipc_
    5. 2295557Domain d5y3bg_: 5y3b G: [338858]
      Other proteins in same PDB: d5y3bc2, d5y3bf2
      automated match to d4wipc_
    6. 2295562Domain d5y3ba_: 5y3b A: [338863]
      Other proteins in same PDB: d5y3bc2, d5y3bf2
      automated match to d4wipc_

More info for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.0 automated matches: