Lineage for d6d6ib_ (6d6i B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2507728Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 2507729Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 2507730Family d.20.1.1: UBC-related [54496] (7 proteins)
  6. 2507955Protein automated matches [190124] (13 species)
    not a true protein
  7. 2507970Species Human (Homo sapiens) [TaxId:9606] [186848] (60 PDB entries)
  8. 3069569Domain d6d6ib_: 6d6i B: [369631]
    Other proteins in same PDB: d6d6ia_, d6d6ic_, d6d6id_, d6d6if_
    automated match to d2c2vb_

Details for d6d6ib_

PDB Entry: 6d6i (more details), 2.55 Å

PDB Description: ube2v1 in complex with ubiquitin variant ubv.v1.1 and ube2n/ubc13
PDB Compounds: (B:) Ubiquitin-conjugating enzyme E2 N

SCOPe Domain Sequences for d6d6ib_:

Sequence, based on SEQRES records: (download)

>d6d6ib_ d.20.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
glprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpeey
pmaapkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddpla
ndvaeqwktneaqaietarawtrlyamn

Sequence, based on observed residues (ATOM records): (download)

>d6d6ib_ d.20.1.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
glprriiketqrllaepvpgikaepdesnaryfhvvidspfeggtfklelflpeeypmaa
pkvrfmtkiyhpnvdklgricldilkdkwspalqirtvllsiqallsapnpddvaeqwkt
neaqaietarawtrlyamn

SCOPe Domain Coordinates for d6d6ib_:

Click to download the PDB-style file with coordinates for d6d6ib_.
(The format of our PDB-style files is described here.)

Timeline for d6d6ib_:

  • d6d6ib_ is new in SCOPe 2.07-stable