Lineage for d6d6ia_ (6d6i A:)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. Family d.20.1.1: UBC-related [54496] (7 proteins)
  6. Protein Ubiquitin conjugating enzyme, UBC [54497] (34 species)
  7. Species Human (Homo sapiens), E2 variant 1 [TaxId:9606] [143051] (7 PDB entries)
    Uniprot Q13404 80-221! Uniprot Q13404 82-220
  8. Domain d6d6ia_: 6d6i A: [369650]
    Other proteins in same PDB: d6d6ic_, d6d6if_
    automated match to d2c2vc1

Details for d6d6ia_

PDB Entry: 6d6i (more details), 2.55 Å

PDB Description: ube2v1 in complex with ubiquitin variant ubv.v1.1 and ube2n/ubc13
PDB Compounds: (A:) Ubiquitin-conjugating enzyme E2 variant 1

SCOPe Domain Sequences for d6d6ia_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6d6ia_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
prnfrlleeleegqkgvgdgtvswgleddedmtltrwtgmiigpprtiyenriyslkiec
gpkypeappfvrfvtkinmngvnssngvvdpraisvlakwqnsysikvvlqelrrlmmsk
enmklpqppegqcysn

SCOPe Domain Coordinates for d6d6ia_ are not available.

Timeline for d6d6ia_:

Domains from other chains:
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d6d6ib_, d6d6ic_, d6d6id_, d6d6ie_, d6d6if_