Lineage for d4gdkd_ (4gdk D:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2502613Family d.15.1.0: automated matches [191343] (1 protein)
    not a true family
  6. 2502614Protein automated matches [190233] (24 species)
    not a true protein
  7. 2502649Species Human (Homo sapiens) [TaxId:9606] [187090] (76 PDB entries)
  8. 2502724Domain d4gdkd_: 4gdk D: [221856]
    automated match to d4gdla_
    complexed with na

Details for d4gdkd_

PDB Entry: 4gdk (more details), 2.7 Å

PDB Description: crystal structure of human atg12~atg5 conjugate in complex with an n- terminal fragment of atg16l1
PDB Compounds: (D:) Ubiquitin-like protein ATG12

SCOPe Domain Sequences for d4gdkd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4gdkd_ d.15.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4gdkd_:

Click to download the PDB-style file with coordinates for d4gdkd_.
(The format of our PDB-style files is described here.)

Timeline for d4gdkd_: