Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2065823Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
    consists of seven 4-stranded beta-sheet motifs; meander
  4. 2065971Superfamily b.69.4: WD40 repeat-like [50978] (4 families) (S)
    also contains 8-bladed propellers
  5. 2066122Family b.69.4.0: automated matches [191412] (1 protein)
    not a true family
  6. 2066123Protein automated matches [190568] (6 species)
    not a true protein

Species:

  1. 2066124Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [267834] (2 PDB entries)
    1. Domains for 3frx:
      1. 2066125Domain d3frxa_: 3frx A: [264797]
        automated match to d4aowa_
        complexed with mn
      2. 2066126Domain d3frxb_: 3frx B: [264798]
        automated match to d4aowa_
        complexed with mn
      3. 2066127Domain d3frxc_: 3frx C: [264799]
        automated match to d4aowa_
        complexed with mn
      4. 2066128Domain d3frxd_: 3frx D: [264800]
        automated match to d4aowa_
        complexed with mn
    2. Domains for 4bh6:
      1. 2066129Domain d4bh6a_: 4bh6 A: [265930]
        automated match to d4n14a_
      2. 2066130Domain d4bh6b_: 4bh6 B: [265931]
        automated match to d4n14a_
      3. 2066131Domain d4bh6c_: 4bh6 C: [265932]
        automated match to d4n14a_
      4. 2066132Domain d4bh6d_: 4bh6 D: [265933]
        automated match to d4n14a_
      5. 2066133Domain d4bh6e_: 4bh6 E: [265934]
        automated match to d4n14a_
      6. 2066134Domain d4bh6f_: 4bh6 F: [265935]
        automated match to d4n14a_
      7. 2066135Domain d4bh6g_: 4bh6 G: [265936]
        automated match to d4n14a_
      8. 2066136Domain d4bh6h_: 4bh6 H: [265937]
        automated match to d4n14a_
  2. 2066137Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [267880] (19 PDB entries)
    1. Domains for 3rfh:
      1. 2066138Domain d3rfha_: 3rfh A: [265318]
        automated match to d4aowa_
      2. 2066139Domain d3rfhb_: 3rfh B: [265319]
        automated match to d4aowa_
      3. 2066140Domain d3rfhc_: 3rfh C: [265320]
        automated match to d4aowa_
      4. 2066141Domain d3rfhd_: 3rfh D: [265321]
        automated match to d4aowa_
    2. Domain for 4ujk:
    3. Domain for 4ujn:
    4. Domain for 4ujp:
    5. Domain for 4ujs:
    6. Domain for 4uju:
    7. Domain for 4ujx:
    8. Domain for 4ujz:
    9. Domain for 4uk2:
    10. Domain for 4uk9:
    11. Domain for 4ukc:
    12. Domain for 4uku:
    13. Domain for 4ukx:
    14. Domain for 4ul4:
    15. Domain for 4ul7:
    16. Domain for 4ul9:
    17. Domain for 4ulc:
    18. Domain for 4ulj:
    19. Domain for 4uln:
  3. 2066160Human (Homo sapiens) [TaxId:9606] [187559] (46 PDB entries)
    1. Domain for 2cnx:
    2. Domains for 2co0:
      1. 2066207Domain d2co0a_: 2co0 A: [163459]
        automated match to d1vyhc1
      2. 2066208Domain d2co0c_: 2co0 C: [163460]
        automated match to d1vyhc1
    3. Domains for 2g99:
      1. 2066193Domain d2g99a_: 2g99 A: [164607]
        automated match to d1vyhc1
        protein/DNA complex
      2. 2066194Domain d2g99b_: 2g99 B: [164608]
        automated match to d1vyhc1
        protein/DNA complex
    4. Domain for 2g9a:
    5. Domain for 2gnq:
    6. Domain for 2h13:
    7. Domain for 2h14:
    8. Domains for 2h68:
      1. 2066172Domain d2h68a_: 2h68 A: [164958]
        automated match to d1vyhc1
      2. 2066173Domain d2h68b_: 2h68 B: [164959]
        automated match to d1vyhc1
    9. Domains for 2h6k:
      1. 2066178Domain d2h6ka_: 2h6k A: [164960]
        automated match to d1vyhc1
      2. 2066179Domain d2h6kb_: 2h6k B: [164961]
        automated match to d1vyhc1
    10. Domains for 2h6n:
      1. 2066165Domain d2h6na_: 2h6n A: [164962]
        automated match to d1vyhc1
      2. 2066166Domain d2h6nb_: 2h6n B: [164963]
        automated match to d1vyhc1
    11. Domains for 2h6q:
      1. 2066176Domain d2h6qa_: 2h6q A: [164964]
        automated match to d1vyhc1
      2. 2066177Domain d2h6qb_: 2h6q B: [164965]
        automated match to d1vyhc1
    12. Domain for 2h9l:
    13. Domains for 2h9m:
      1. 2066191Domain d2h9ma_: 2h9m A: [165021]
        automated match to d1vyhc1
      2. 2066192Domain d2h9mc_: 2h9m C: [165022]
        automated match to d1vyhc1
    14. Domains for 2h9n:
      1. 2066201Domain d2h9na_: 2h9n A: [165023]
        automated match to d1vyhc1
      2. 2066202Domain d2h9nc_: 2h9n C: [165024]
        automated match to d1vyhc1
    15. Domains for 2o9k:
      1. 2066187Domain d2o9ka_: 2o9k A: [166592]
        automated match to d1vyhc1
      2. 2066188Domain d2o9kc_: 2o9k C: [166593]
        automated match to d1vyhc1
    16. Domain for 3eg6:
    17. Domain for 3emh:
    18. Domain for 3mxx:
    19. Domain for 3n0d:
    20. Domain for 3n0e:
    21. Domain for 3p4f:
    22. Domains for 3psl:
      1. 2066170Domain d3psla_: 3psl A: [183954]
        automated match to d1vyhc1
      2. 2066171Domain d3pslb_: 3psl B: [183955]
        automated match to d1vyhc1
    23. Domains for 3smr:
      1. 2066180Domain d3smra_: 3smr A: [216486]
        automated match to d3ur4a_
        complexed with edo, np7, unx
      2. 2066181Domain d3smrb_: 3smr B: [216487]
        automated match to d3ur4a_
        complexed with edo, np7, unx
      3. 2066182Domain d3smrc_: 3smr C: [216488]
        automated match to d3ur4a_
        complexed with edo, np7, unx
      4. 2066183Domain d3smrd_: 3smr D: [216489]
        automated match to d3ur4a_
        complexed with edo, np7, unx
    24. Domains for 3ur4:
      1. 2066197Domain d3ur4a_: 3ur4 A: [186376]
        automated match to d1vyhc1
        complexed with 0bw, cl, edo, so4, unx
      2. 2066198Domain d3ur4b_: 3ur4 B: [186377]
        automated match to d1vyhc1
        complexed with 0bw, cl, edo, so4, unx
    25. Domain for 3uvk:
    26. Domain for 3uvl:
    27. Domain for 3uvm:
    28. Domain for 3uvo:
    29. Domain for 4a7j:
    30. Domain for 4gga:
    31. Domain for 4ggc:
    32. Domains for 4gm8:
      1. 2066218Domain d4gm8a_: 4gm8 A: [234482]
        automated match to d2h9la_
      2. 2066219Domain d4gm8b_: 4gm8 B: [234483]
        automated match to d2h9la_
      3. 2066220Domain d4gm8c_: 4gm8 C: [234484]
        automated match to d2h9la_
      4. 2066221Domain d4gm8d_: 4gm8 D: [234485]
        automated match to d2h9la_
    33. Domains for 4gm9:
      1. 2066209Domain d4gm9a_: 4gm9 A: [236990]
        automated match to d4gm8c_
      2. 2066210Domain d4gm9b_: 4gm9 B: [236992]
        automated match to d4gm8c_
    34. Domain for 4gmb:
    35. Domain for 4ia9:
    36. Domain for 4n14:
    37. Domains for 4ql1:
      1. 2066185Domain d4ql1a_: 4ql1 A: [261916]
        automated match to d2h9la_
        complexed with 35q, edo, gol, unx
      2. 2066186Domain d4ql1b_: 4ql1 B: [261917]
        automated match to d2h9la_
        complexed with 35q, edo, gol, unx
    38. Domain for 4qqe:
    39. Domain for 4yvd:
    40. Domains for 5eal:
      1. 2066216Domain d5eala_: 5eal A: [278977]
        automated match to d2h9la_
        complexed with 5ml, cl, edo, gol, unx
      2. 2066217Domain d5ealb_: 5eal B: [278978]
        automated match to d2h9la_
        complexed with 5ml, cl, edo, gol, unx
    41. Domains for 5eam:
      1. 2066214Domain d5eama_: 5eam A: [278972]
        automated match to d2h9la_
        complexed with 5mn, btb, edo, so4, unx
      2. 2066215Domain d5eamb_: 5eam B: [278975]
        automated match to d2h9la_
        complexed with 5mn, btb, edo, so4, unx
    42. Domain for 5eap:
    43. Domains for 5ear:
      1. 2066212Domain d5eara_: 5ear A: [278973]
        automated match to d2h9la_
        complexed with 5mq, edo, so4, unx
      2. 2066213Domain d5earb_: 5ear B: [278974]
        automated match to d2h9la_
        complexed with 5mq, edo, so4, unx
    44. Domain for 5m23:
    45. Domain for 5m25:
    46. Domain for 5vfc:
  4. 2066226Mouse (Mus musculus) [TaxId:10090] [188331] (1 PDB entry)
  5. 2066229Nostoc punctiforme [TaxId:272131] [255705] (1 PDB entry)
  6. 2066234Schizosaccharomyces japonicus [TaxId:402676] [311483] (1 PDB entry)

More info for Protein automated matches from b.69.4.0: automated matches

Timeline for Protein automated matches from b.69.4.0: automated matches: