Lineage for d6id1p_ (6id1 p:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2951860Superfamily d.58.7: RNA-binding domain, RBD, aka RNA recognition motif (RRM) [54928] (6 families) (S)
  5. 2952471Family d.58.7.0: automated matches [191529] (1 protein)
    not a true family
  6. 2952472Protein automated matches [190896] (11 species)
    not a true protein
  7. 2952511Species Human (Homo sapiens) [TaxId:9606] [188315] (106 PDB entries)
  8. 2952610Domain d6id1p_: 6id1 p: [365982]
    Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1q1, d6id1q2, d6id1r1, d6id1r2, d6id1s_, d6id1t_
    automated match to d2fjja_
    complexed with gtp, ihp, mg, zn

Details for d6id1p_

PDB Entry: 6id1 (more details), 2.86 Å

PDB Description: cryo-em structure of a human intron lariat spliceosome after prp43 loaded (ils2 complex) at 2.9 angstrom resolution
PDB Compounds: (p:) U2 small nuclear ribonucleoprotein B''

SCOPe Domain Sequences for d6id1p_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6id1p_ d.58.7.0 (p:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
irpnhtiyinnmndkikkeelkrslyalfsqfghvvdivalktmkmrgqafvifkelgss
tnalrqlqgfpfygkpmriqyaktdsdiiskmrg

SCOPe Domain Coordinates for d6id1p_:

Click to download the PDB-style file with coordinates for d6id1p_.
(The format of our PDB-style files is described here.)

Timeline for d6id1p_: