SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily d.58.7: RNA-binding domain, RBD, aka RNA recognition motif (RRM) [54928] (6 families)
Family d.58.7.0: automated matches [191529] (1 protein)
not a true family
Protein automated matches [190896] (11 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [189319] (9 PDB entries)
1. Domains for 2km8:
  1. Domain d2km8b_: 2km8 B: [242561]
    automated match to d2x1ba_
    protein/RNA complex
  2. Domain d2km8c1: 2km8 C:156-241 [242562]
    automated match to d1u1qa1
    protein/RNA complex
  3. Domain d2km8c2: 2km8 C:242-322 [242563]
    automated match to d1u1qa2
    protein/RNA complex
2. Domain for 2la4:
  - Domain d2la4a1: 2la4 A:315-414 [242821]
    Other proteins in same PDB: d2la4a2
    automated match to d1x4ga1
3. Domain for 2x1a:
  - Domain d2x1aa_: 2x1a A: [207098]
    automated match to d1x5ta1
    protein/RNA complex; complexed with mg
4. Domain for 2x1b:
  - Domain d2x1ba_: 2x1b A: [207099]
    automated match to d1x5ta1
    complexed with po4
5. Domain for 2x1f:
  - Domain d2x1fa1: 2x1f A:16-103 [207100]
    Other proteins in same PDB: d2x1fa2
    automated match to d1x5ta1
    protein/RNA complex
6. Domains for 3md1:
  1. Domain d3md1a1: 3md1 A:161-240 [181013]
    Other proteins in same PDB: d3md1a2
    automated match to d1x5sa1
    complexed with gol
  2. Domain d3md1b_: 3md1 B: [181014]
    Other proteins in same PDB: d3md1a2
    automated match to d1x5sa1
    complexed with gol
7. Domains for 3md3:
  1. Domain d3md3a1: 3md3 A:75-159 [265066]
    automated match to d1cvja1
    complexed with gol, so4
  2. Domain d3md3a2: 3md3 A:160-240 [265067]
    automated match to d1cvja1
    complexed with gol, so4
8. Domain for 4uqt:
  - Domain d4uqta_: 4uqt A: [259556]
    automated match to d2rraa_
9. Domains for 5lsl:
  1. Domain d5lsla_: 5lsl A: [332971]
    automated match to d3mdfa_
    protein/RNA complex
  2. Domain d5lslb_: 5lsl B: [332939]
    automated match to d3mdfa_
    protein/RNA complex
  3. Domain d5lslc_: 5lsl C: [332980]
    automated match to d3mdfa_
    protein/RNA complex
  4. Domain d5lsld_: 5lsl D: [332937]
    automated match to d3mdfa_
    protein/RNA complex
Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [279753] (7 PDB entries)
1. Domain for 2mzq:
  - Domain d2mzqa1: 2mzq A:329-427 [279755]
    Other proteins in same PDB: d2mzqa2
    automated match to d1x4aa1
2. Domain for 2mzr:
  - Domain d2mzra1: 2mzr A:144-236 [279756]
    Other proteins in same PDB: d2mzra2
    automated match to d2dh9a_
3. Domain for 2mzs:
  - Domain d2mzsa1: 2mzs A:262-358 [279754]
    Other proteins in same PDB: d2mzsa2
    automated match to d2dh9a_
4. Domain for 5d77:
  - Domain d5d77a1: 5d77 A:313-388 [321276]
    Other proteins in same PDB: d5d77a2
    automated match to d2sxla_
    complexed with cit, na, no3
5. Domain for 5d78:
  - Domain d5d78a1: 5d78 A:313-387 [321293]
    Other proteins in same PDB: d5d78a2
    automated match to d2sxla_
    complexed with bme, so4
6. Domains for 5t9p:
  1. Domain d5t9pa_: 5t9p A: [326329]
    automated match to d1d8za_
    complexed with cl, so4
  2. Domain d5t9pb_: 5t9p B: [344401]
    automated match to d5t9pa_
    complexed with cl, so4
  3. Domain d5t9pc_: 5t9p C: [344402]
    automated match to d5t9pa_
    complexed with cl, so4
  4. Domain d5t9pd_: 5t9p D: [326334]
    automated match to d1d8za_
    complexed with cl, so4
7. Domain for 6ez7:
  - Domain d6ez7a1: 6ez7 A:303-384 [361053]
    Other proteins in same PDB: d6ez7a2
    automated match to d2u2fa_
    complexed with peg
Barley (Hordeum vulgare) [TaxId:4513] [261791] (1 PDB entry)
- Domain for 2mpu:
  - Domain d2mpua_: 2mpu A: [261792]
    automated match to d4c7qa_
Fruit fly (Drosophila melanogaster) [TaxId:7227] [332223] (3 PDB entries)
1. Domains for 5uzg:
  1. Domain d5uzga_: 5uzg A: [332225]
    automated match to d2kg0a_
    complexed with gol, so4
  2. Domain d5uzgb_: 5uzg B: [332286]
    automated match to d2kg0a_
    complexed with gol, so4
2. Domains for 5uzm:
  1. Domain d5uzma_: 5uzm A: [332231]
    automated match to d2kfya_
  2. Domain d5uzmb_: 5uzm B: [332224]
    automated match to d2kfya_
3. Domain for 5uzn:
  - Domain d5uzna_: 5uzn A: [415516]
    automated match to d2hgna_
    complexed with gol, so4
Helicobacter pylori [TaxId:210] [255348] (1 PDB entry)
- Domain for 2ki2:
  - Domain d2ki2a_: 2ki2 A: [242518]
    automated match to d3ucga_
    protein/DNA complex; protein/RNA complex

Human (Homo sapiens) [TaxId:9606] [188315] (106 PDB entries)

Domain for 2d9p:
- Domain d2d9pa1: 2d9p A:286-375 [241526]
  Other proteins in same PDB: d2d9pa2, d2d9pa3
  automated match to d1wf2a_
Domain for 2dgp:
- Domain d2dgpa1: 2dgp A:48-141 [241557]
  Other proteins in same PDB: d2dgpa2, d2dgpa3
  automated match to d1sxla_
Domain for 2dgq:
- Domain d2dgqa1: 2dgq A:38-132 [241558]
  Other proteins in same PDB: d2dgqa2, d2dgqa3
  automated match to d2cpza1
Domain for 2dgs:
- Domain d2dgsa1: 2dgs A:110-195 [241559]
  Other proteins in same PDB: d2dgsa2, d2dgsa3
  automated match to d1whwa_
Domain for 2dgt:
- Domain d2dgta1: 2dgt A:75-153 [241560]
  Other proteins in same PDB: d2dgta2, d2dgta3
  automated match to d1whwa_
Domain for 2dgu:
- Domain d2dgua1: 2dgu A:334-423 [241561]
  Other proteins in same PDB: d2dgua2, d2dgua3
  automated match to d2cpda1
Domain for 2dgv:
- Domain d2dgva1: 2dgv A:651-729 [241562]
  Other proteins in same PDB: d2dgva2, d2dgva3
  automated match to d2ywka_
Domain for 2dgw:
- Domain d2dgwa1: 2dgw A:291-368 [344560]
  Other proteins in same PDB: d2dgwa2, d2dgwa3
  automated match to d5uzma_
Domain for 2dh8:
- Domain d2dh8a1: 2dh8 A:1-92 [241565]
  Other proteins in same PDB: d2dh8a2, d2dh8a3
  automated match to d1d8za_
Domain for 2dh9:
- Domain d2dh9a1: 2dh9 A:540-615 [241566]
  Other proteins in same PDB: d2dh9a2, d2dh9a3
  automated match to d2ywka_
Domain for 2dhg:
- Domain d2dhga1: 2dhg A:94-184 [241567]
  Other proteins in same PDB: d2dhga2, d2dhga3
  automated match to d2sxla_
Domains for 2dhs:
1. Domain d2dhsa1: 2dhs A:1-103 [381284]
  automated match to d2dgpa1
2. Domain d2dhsa2: 2dhs A:104-187 [381287]
  automated match to d2dgpa1
Domain for 2div:
- Domain d2diva1: 2div A:8-93 [241571]
  Other proteins in same PDB: d2diva2, d2diva3
  automated match to d1d8za_
Domain for 2dk2:
- Domain d2dk2a1: 2dk2 A:8-91 [241580]
  Other proteins in same PDB: d2dk2a2, d2dk2a3
  automated match to d1wf2a_
Domain for 2dnh:
- Domain d2dnha1: 2dnh A:126-217 [241625]
  Other proteins in same PDB: d2dnha2, d2dnha3
  automated match to d1d9aa_
Domain for 2dnk:
- Domain d2dnka1: 2dnk A:143-234 [241626]
  Other proteins in same PDB: d2dnka2, d2dnka3
  automated match to d1wf2a_
Domain for 2dnm:
- Domain d2dnma1: 2dnm A:8-97 [241627]
  Other proteins in same PDB: d2dnma2, d2dnma3
  automated match to d1wf1a_
Domain for 2dno:
- Domain d2dnoa1: 2dno A:66-154 [241629]
  Other proteins in same PDB: d2dnoa2, d2dnoa3
  automated match to d1d9aa_
Domain for 2dnp:
- Domain d2dnpa1: 2dnp A:77-153 [241630]
  Other proteins in same PDB: d2dnpa2, d2dnpa3
  automated match to d1wf2a_
Domain for 2dnq:
- Domain d2dnqa1: 2dnq A:1-77 [241631]
  Other proteins in same PDB: d2dnqa2, d2dnqa3
  automated match to d1wg1a_
Domain for 2dny:
- Domain d2dnya1: 2dny A:437-542 [241634]
  Other proteins in same PDB: d2dnya2, d2dnya3
  automated match to d2pe8a_
Domain for 2do4:
- Domain d2do4a1: 2do4 A:791-877 [241636]
  Other proteins in same PDB: d2do4a2, d2do4a3
  automated match to d1x4aa1
Domain for 2e5h:
- Domain d2e5ha1: 2e5h A:1-87 [241687]
  Other proteins in same PDB: d2e5ha2
  automated match to d1x5sa1
Domain for 2fc8:
- Domain d2fc8a1: 2fc8 A:8-96 [241827]
  Other proteins in same PDB: d2fc8a2, d2fc8a3
  automated match to d1oo0b_
Domain for 2fc9:
- Domain d2fc9a1: 2fc9 A:8-95 [241828]
  Other proteins in same PDB: d2fc9a2, d2fc9a3
  automated match to d3mdfa_
Domain for 2fho:
- Domain d2fhob1: 2fho B:8-93 [241851]
  Other proteins in same PDB: d2fhob2
  automated match to d2cqca1
  protein/RNA complex
Domain for 2hgl:
- Domain d2hgla_: 2hgl A: [264299]
  automated match to d2kg0a_
Domain for 2hgm:
- Domain d2hgma_: 2hgm A: [242035]
  automated match to d2ek1g_
Domain for 2hgn:
- Domain d2hgna_: 2hgn A: [344584]
  automated match to d5uzma_
Domain for 2k8g:
- Domain d2k8ga1: 2k8g A:90-182 [242414]
  Other proteins in same PDB: d2k8ga2
  automated match to d2erra1
Domain for 2kfy:
- Domain d2kfya_: 2kfy A: [264349]
  automated match to d2kg0a_
  protein/RNA complex
Domain for 2kg0:
- Domain d2kg0a_: 2kg0 A: [242506]
  automated match to d2ek1g_
  protein/RNA complex
Domain for 2kg1:
- Domain d2kg1a_: 2kg1 A: [381294]
  automated match to d2hgna_
  protein/RNA complex
Domains for 2kxf:
1. Domain d2kxfa1: 2kxf A:102-200 [264362]
  Other proteins in same PDB: d2kxfa3
  automated match to d2mpua_
2. Domain d2kxfa2: 2kxf A:201-297 [264363]
  Other proteins in same PDB: d2kxfa3
  automated match to d2mpua_
Domains for 2kxh:
1. Domain d2kxha1: 2kxh A:102-200 [264364]
  Other proteins in same PDB: d2kxha3
  automated match to d2mpua_
2. Domain d2kxha2: 2kxh A:201-297 [264365]
  Other proteins in same PDB: d2kxha3
  automated match to d2mpua_
Domain for 2la6:
- Domain d2la6a1: 2la6 A:11-99 [242822]
  Other proteins in same PDB: d2la6a2
  automated match to d2cpea1
Domain for 2lcw:
- Domain d2lcwa_: 2lcw A: [242846]
  automated match to d2cpea1
Domain for 2lea:
- Domain d2leaa_: 2lea A: [242856]
  automated match to d2cqda1
Domain for 2leb:
- Domain d2leba_: 2leb A: [242857]
  automated match to d2cqda1
  protein/RNA complex
Domain for 2lec:
- Domain d2leca_: 2lec A: [242858]
  automated match to d2cqda1
  protein/RNA complex
Domain for 2lmi:
- Domain d2lmia1: 2lmi A:2-107 [278381]
  Other proteins in same PDB: d2lmia2
  automated match to d2hgla_
Domain for 2lxi:
- Domain d2lxia_: 2lxi A: [243025]
  automated match to d3hi9b_
Domain for 2lxu:
- Domain d2lxua1: 2lxu A:7-111 [304190]
  Other proteins in same PDB: d2lxua2
  automated match to d2kfya_
Domain for 2m3d:
- Domain d2m3da1: 2m3d A:2-95 [243090]
  Other proteins in same PDB: d2m3da2
  automated match to d2e29a1
Domain for 2m8h:
- Domain d2m8ha1: 2m8h A:11-101 [268013]
  Other proteins in same PDB: d2m8ha2
  automated match to d1d8za_
Domain for 2mb0:
- Domain d2mb0b_: 2mb0 B: [264385]
  automated match to d2mksa_
  protein/RNA complex
Domain for 2mik:
- Domain d2mika1: 2mik A:398-490 [261787]
  Other proteins in same PDB: d2mika2
  automated match to d2rraa_
Domain for 2mil:
- Domain d2mila1: 2mil A:398-490 [261788]
  Other proteins in same PDB: d2mila2
  automated match to d2rraa_
Domain for 2mks:
- Domain d2mksa1: 2mks A:3-92 [243195]
  Other proteins in same PDB: d2mksa2
  automated match to d2cqia1
Domain for 2mmy:
- Domain d2mmya1: 2mmy A:231-323 [270275]
  Other proteins in same PDB: d2mmya2
  automated match to d2cpea1
Domain for 2my7:
- Domain d2my7a1: 2my7 A:398-490 [304213]
  Other proteins in same PDB: d2my7a2
  automated match to d2mika_
Domain for 2my8:
- Domain d2my8a1: 2my8 A:398-490 [304215]
  Other proteins in same PDB: d2my8a2
  automated match to d2mika_
Domain for 2pe8:
- Domain d2pe8a1: 2pe8 A:301-401 [205511]
  Other proteins in same PDB: d2pe8a2
  automated match to d2dita1
Domain for 2rra:
- Domain d2rraa1: 2rra A:109-201 [243757]
  Other proteins in same PDB: d2rraa2
  automated match to d2cpza1
  protein/RNA complex
Domain for 2rrb:
- Domain d2rrba1: 2rrb A:111-201 [243758]
  Other proteins in same PDB: d2rrba2
  automated match to d1x4aa1
Domain for 2rvj:
- Domain d2rvja1: 2rvj A:438-539 [344651]
  Other proteins in same PDB: d2rvja2
  automated match to d5uzma_
Domain for 2ytc:
- Domain d2ytca1: 2ytc A:234-311 [264617]
  Other proteins in same PDB: d2ytca2
  automated match to d2rraa_
Domain for 2ywk:
- Domain d2ywka1: 2ywk A:5-82 [170890]
  Other proteins in same PDB: d2ywka2
  automated match to d1x5ua1
Domain for 3b4d:
- Domain d3b4da_: 3b4d A: [208516]
  automated match to d2cpea1
Domains for 3b4m:
1. Domain d3b4ma_: 3b4m A: [208517]
  automated match to d2cpea1
2. Domain d3b4mb_: 3b4m B: [208518]
  automated match to d2cpea1
3. Domain d3b4mc_: 3b4m C: [208519]
  automated match to d2cpea1
4. Domain d3b4md_: 3b4m D: [208520]
  automated match to d2cpea1
Domains for 3bs9:
1. Domain d3bs9a_: 3bs9 A: [172805]
  automated match to d1x5sa1
  complexed with iod
2. Domain d3bs9b_: 3bs9 B: [172806]
  automated match to d1x5sa1
  complexed with iod
Domain for 3egn:
- Domain d3egna_: 3egn A: [245860]
  automated match to d2cpxa1
Domains for 3hi9:
1. Domain d3hi9a_: 3hi9 A: [211068]
  automated match to d1oo0b_
2. Domain d3hi9b_: 3hi9 B: [211069]
  automated match to d1oo0b_
3. Domain d3hi9c_: 3hi9 C: [211070]
  automated match to d1oo0b_
4. Domain d3hi9d_: 3hi9 D: [211071]
  automated match to d1oo0b_
Domains for 3n9u:
1. Domain d3n9uc_: 3n9u C: [294006]
  automated match to d3n9ui_
  protein/RNA complex; complexed with gol
2. Domain d3n9ui_: 3n9u I: [265075]
  automated match to d4c7qa_
  protein/RNA complex; complexed with gol
Domains for 3p5t:
1. Domain d3p5tl_: 3p5t L: [265145]
  automated match to d4c7qa_
  protein/RNA complex
2. Domain d3p5tm_: 3p5t M: [265146]
  automated match to d4c7qa_
  protein/RNA complex
3. Domain d3p5tn_: 3p5t N: [265147]
  automated match to d4c7qa_
  protein/RNA complex
4. Domain d3p5to_: 3p5t O: [265148]
  automated match to d4c7qa_
  protein/RNA complex
5. Domain d3p5tp_: 3p5t P: [265149]
  automated match to d4c7qa_
  protein/RNA complex
6. Domain d3p5tq_: 3p5t Q: [265150]
  automated match to d4c7qa_
  protein/RNA complex
Domains for 3p6y:
1. Domain d3p6yc_: 3p6y C: [265151]
  automated match to d4c7qa_
  protein/RNA complex
2. Domain d3p6yd_: 3p6y D: [265152]
  automated match to d4c7qa_
  protein/RNA complex
3. Domain d3p6yg_: 3p6y G: [265153]
  automated match to d4c7qa_
  protein/RNA complex
4. Domain d3p6yh_: 3p6y H: [265154]
  automated match to d4c7qa_
  protein/RNA complex
5. Domain d3p6yk_: 3p6y K: [265155]
  automated match to d4c7qa_
  protein/RNA complex
6. Domain d3p6yl_: 3p6y L: [265156]
  automated match to d4c7qa_
  protein/RNA complex
7. Domain d3p6yo_: 3p6y O: [265157]
  automated match to d4c7qa_
  protein/RNA complex
8. Domain d3p6yp_: 3p6y P: [265158]
  automated match to d4c7qa_
  protein/RNA complex
Domains for 3q2s:
1. Domain d3q2sc_: 3q2s C: [265241]
  automated match to d2mpua_
  protein/RNA complex
2. Domain d3q2sd_: 3q2s D: [265242]
  automated match to d2mpua_
  protein/RNA complex
Domains for 3r27:
1. Domain d3r27a_: 3r27 A: [200430]
  automated match to d3r27b_
  complexed with gol
2. Domain d3r27b_: 3r27 B: [196174]
  automated match to d1wexa_
  complexed with gol
Domains for 3rw7:
1. Domain d3rw7a1: 3rw7 A:118-199 [249238]
  Other proteins in same PDB: d3rw7a2, d3rw7b_, d3rw7c2, d3rw7d_
  automated match to d1kooa2
2. Domain d3rw7c1: 3rw7 C:117-198 [249241]
  Other proteins in same PDB: d3rw7a2, d3rw7b_, d3rw7c2, d3rw7d_
  automated match to d1kooa2
Domain for 3ucg:
- Domain d3ucga1: 3ucg A:167-253 [217298]
  Other proteins in same PDB: d3ucga2
  automated match to d2cpea1
  complexed with edo, peg, pge, so4
Domain for 3ue2:
- Domain d3ue2a1: 3ue2 A:443-559 [186248]
  Other proteins in same PDB: d3ue2a2
  automated match to d2dita1
  complexed with so4
Domain for 3us5:
- Domain d3us5a1: 3us5 A:443-559 [186387]
  Other proteins in same PDB: d3us5a2
  automated match to d2dita1
  complexed with cl
Domains for 3uwt:
1. Domain d3uwta1: 3uwt A:118-217 [265542]
  Other proteins in same PDB: d3uwta3
  automated match to d2mpua_
  complexed with cl
2. Domain d3uwta2: 3uwt A:218-313 [265543]
  Other proteins in same PDB: d3uwta3
  automated match to d2mpua_
  complexed with cl
Domain for 4a8x:
- Domain d4a8xa1: 4a8x A:159-244 [218719]
  Other proteins in same PDB: d4a8xa2
  automated match to d2cqia1
  protein/RNA complex
Domains for 4cko:
1. Domain d4ckoa3: 4cko A:445-531 [307129]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
2. Domain d4ckob4: 4cko B:445-531 [307131]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
3. Domain d4ckoc4: 4cko C:445-531 [307133]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
4. Domain d4ckod4: 4cko D:445-531 [307135]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
5. Domain d4ckoe4: 4cko E:445-531 [307137]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
6. Domain d4ckof4: 4cko F:445-531 [307139]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
7. Domain d4ckog4: 4cko G:445-531 [307141]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
8. Domain d4ckoh4: 4cko H:445-531 [307143]
  Other proteins in same PDB: d4ckoa2, d4ckob3, d4ckoc3, d4ckod3, d4ckoe3, d4ckof3, d4ckog3, d4ckoh3
  automated match to d2adca2
  complexed with cl, zn
Domains for 4cq1:
1. Domain d4cq1a2: 4cq1 A:445-531 [237006]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
2. Domain d4cq1b2: 4cq1 B:445-531 [237000]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
3. Domain d4cq1c2: 4cq1 C:445-531 [237001]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
4. Domain d4cq1d2: 4cq1 D:445-531 [237005]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
5. Domain d4cq1e2: 4cq1 E:445-531 [237004]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
6. Domain d4cq1f2: 4cq1 F:445-531 [237003]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
7. Domain d4cq1g2: 4cq1 G:445-531 [236999]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
8. Domain d4cq1h2: 4cq1 H:445-531 [237002]
  Other proteins in same PDB: d4cq1a1, d4cq1b1, d4cq1c1, d4cq1d1, d4cq1e1, d4cq1f1, d4cq1g1, d4cq1h1
  automated match to d4ckob2
  complexed with cl, zn
Domains for 4ed5:
1. Domain d4ed5a1: 4ed5 A:18-99 [234372]
  automated match to d1fxla1
  protein/RNA complex; complexed with edo, gol, m2m
2. Domain d4ed5a2: 4ed5 A:100-185 [234388]
  automated match to d1fxla2
  protein/RNA complex; complexed with edo, gol, m2m
3. Domain d4ed5b1: 4ed5 B:18-99 [234373]
  automated match to d1fxla1
  protein/RNA complex; complexed with edo, gol, m2m
4. Domain d4ed5b2: 4ed5 B:100-186 [234387]
  automated match to d1fxla2
  protein/RNA complex; complexed with edo, gol, m2m
Domains for 4egl:
1. Domain d4egla1: 4egl A:18-99 [234378]
  automated match to d1fxla1
  complexed with gol, so4
2. Domain d4egla2: 4egl A:100-184 [234389]
  automated match to d1fxla2
  complexed with gol, so4
Domain for 4f25:
- Domain d4f25a1: 4f25 A:99-178 [220949]
  Other proteins in same PDB: d4f25a2
  automated match to d1x4ha1
Domain for 4f26:
- Domain d4f26a_: 4f26 A: [220950]
  automated match to d1x4ha1
Domains for 4fxv:
1. Domain d4fxva1: 4fxv A:20-99 [221592]
  Other proteins in same PDB: d4fxva2, d4fxvb2, d4fxvc2, d4fxvd2
  automated match to d2cpja1
2. Domain d4fxvb1: 4fxv B:20-97 [221593]
  Other proteins in same PDB: d4fxva2, d4fxvb2, d4fxvc2, d4fxvd2
  automated match to d2cpja1
3. Domain d4fxvc1: 4fxv C:20-99 [221594]
  Other proteins in same PDB: d4fxva2, d4fxvb2, d4fxvc2, d4fxvd2
  automated match to d2cpja1
4. Domain d4fxvd1: 4fxv D:20-96 [221595]
  Other proteins in same PDB: d4fxva2, d4fxvb2, d4fxvc2, d4fxvd2
  automated match to d2cpja1
Domains for 4ljm:
1. Domain d4ljma_: 4ljm A: [257840]
  automated match to d2rraa_
2. Domain d4ljmb_: 4ljm B: [262951]
  automated match to d2mika_
Domains for 4tlq:
1. Domain d4tlqa_: 4tlq A: [279845]
  automated match to d2mika_
2. Domain d4tlqb_: 4tlq B: [279846]
  automated match to d2mika_
Domains for 5iqq:
1. Domain d5iqqa_: 5iqq A: [317009]
  automated match to d1d8za_
  protein/RNA complex
2. Domain d5iqqb_: 5iqq B: [316997]
  automated match to d1d8za_
  protein/RNA complex
3. Domain d5iqqc_: 5iqq C: [317030]
  automated match to d1d8za_
  protein/RNA complex
4. Domain d5iqqd_: 5iqq D: [317004]
  automated match to d1d8za_
  protein/RNA complex
5. Domain d5iqqe_: 5iqq E: [316998]
  automated match to d1d8za_
  protein/RNA complex
Domains for 5kwq:
1. Domain d5kwqa1: 5kwq A:101-200 [338175]
  Other proteins in same PDB: d5kwqa3, d5kwqb3
  automated match to d2mpua_
2. Domain d5kwqa2: 5kwq A:201-294 [338176]
  Other proteins in same PDB: d5kwqa3, d5kwqb3
  automated match to d2mpua_
3. Domain d5kwqb1: 5kwq B:101-200 [338184]
  Other proteins in same PDB: d5kwqa3, d5kwqb3
  automated match to d2mpua_
4. Domain d5kwqb2: 5kwq B:201-295 [338185]
  Other proteins in same PDB: d5kwqa3, d5kwqb3
  automated match to d2mpua_
Domain for 5lxr:
- Domain d5lxra_: 5lxr A: [327194]
  automated match to d3ulha_
  protein/RNA complex; complexed with br, cl, sm
Domains for 5lxy:
1. Domain d5lxya_: 5lxy A: [327224]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
2. Domain d5lxyb_: 5lxy B: [327241]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
3. Domain d5lxye_: 5lxy E: [327226]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
4. Domain d5lxyg_: 5lxy G: [327200]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
5. Domain d5lxyi_: 5lxy I: [327209]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
6. Domain d5lxyk_: 5lxy K: [327258]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
7. Domain d5lxym_: 5lxy M: [327253]
  automated match to d3ulha_
  protein/RNA complex; complexed with br
Domain for 5o2v:
- Domain d5o2va_: 5o2v A: [336208]
  automated match to d2mb0b_
Domain for 5obn:
- Domain d5obna_: 5obn A: [347134]
  automated match to d3egna_
Domain for 5szw:
- Domain d5szwa1: 5szw A:3-101 [338680]
  Other proteins in same PDB: d5szwa2
  automated match to d3hi9d_
Domains for 5tbx:
1. Domain d5tbxa_: 5tbx A: [333019]
  Other proteins in same PDB: d5tbxb2
  automated match to d2mb0b_
  complexed with act, ni
2. Domain d5tbxb1: 5tbx B:2-92 [332990]
  Other proteins in same PDB: d5tbxb2
  automated match to d2mb0b_
  complexed with act, ni
Domains for 6dbp:
1. Domain d6dbpa1: 6dbp A:2-84 [368508]
  Other proteins in same PDB: d6dbpa2
  automated match to d1d8za_
2. Domain d6dbpb_: 6dbp B: [368507]
  Other proteins in same PDB: d6dbpa2
  automated match to d1d8za_
Domain for 6dg1:
- Domain d6dg1a1: 6dg1 A:94-194 [357069]
  Other proteins in same PDB: d6dg1a2
  automated match to d2kg0a_

Domains for 6icz:

Domain d6iczp_: 6icz p: [365894]
Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczq1, d6iczq2, d6iczr1, d6iczr2, d6iczs_, d6iczt_, d6iczu1, d6iczu2, d6iczv_
automated match to d2fjja_
complexed with atp, gtp, ihp, mg, zn

Domain d6iczy_: 6icz y: [365958]
Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczq1, d6iczq2, d6iczr1, d6iczr2, d6iczs_, d6iczt_, d6iczu1, d6iczu2, d6iczv_
automated match to d3mdfa_
complexed with atp, gtp, ihp, mg, zn

Domains for 6id0:

Domain d6id0p_: 6id0 p: [365922]
Other proteins in same PDB: d6id0a_, d6id0b_, d6id0c1, d6id0c2, d6id0c3, d6id0c4, d6id0c5, d6id0d_, d6id0e_, d6id0f_, d6id0g_, d6id0h_, d6id0i_, d6id0j_, d6id0k_, d6id0l_, d6id0m_, d6id0n_, d6id0o_, d6id0q1, d6id0q2, d6id0r1, d6id0r2, d6id0s_, d6id0t_
automated match to d2fjja_
complexed with gtp, ihp, mg, zn

Domain d6id0y_: 6id0 y: [365981]
Other proteins in same PDB: d6id0a_, d6id0b_, d6id0c1, d6id0c2, d6id0c3, d6id0c4, d6id0c5, d6id0d_, d6id0e_, d6id0f_, d6id0g_, d6id0h_, d6id0i_, d6id0j_, d6id0k_, d6id0l_, d6id0m_, d6id0n_, d6id0o_, d6id0q1, d6id0q2, d6id0r1, d6id0r2, d6id0s_, d6id0t_
automated match to d3mdfa_
complexed with gtp, ihp, mg, zn

Domains for 6id1:

Domain d6id1p_: 6id1 p: [365982]
Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1q1, d6id1q2, d6id1r1, d6id1r2, d6id1s_, d6id1t_
automated match to d2fjja_
complexed with gtp, ihp, mg, zn

Domain d6id1y_: 6id1 y: [366020]
Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1q1, d6id1q2, d6id1r1, d6id1r2, d6id1s_, d6id1t_
automated match to d3mdfa_
complexed with gtp, ihp, mg, zn

Domains for 6nty:
1. Domain d6ntya1: 6nty A:21-100 [376062]
  Other proteins in same PDB: d6ntya2, d6ntyb2
  automated match to d1d8za_
  complexed with po4
2. Domain d6ntyb1: 6nty B:21-100 [376064]
  Other proteins in same PDB: d6ntya2, d6ntyb2
  automated match to d1d8za_
  complexed with po4
Domain for 6pai:
- Domain d6paid_: 6pai D: [374512]
  automated match to d2erra1
  complexed with epe, o6m, zn
Domain for 6q0r:
- Domain d6q0rd1: 6q0r D:250-329 [376861]
  Other proteins in same PDB: d6q0rd2
  automated match to d2mpua_
  complexed with o6m, oxm, zn
Domain for 6q0v:
- Domain d6q0vd1: 6q0v D:250-327 [376852]
  Other proteins in same PDB: d6q0vd2
  automated match to d2mpua_
  complexed with p7m, zn
Domain for 6q0w:
- Domain d6q0wd1: 6q0w D:250-327 [376881]
  Other proteins in same PDB: d6q0wd2
  automated match to d2mpua_
  complexed with ef6, zn
Domain for 6snj:
- Domain d6snja_: 6snj A: [395579]
  automated match to d2lcwa_
  protein/RNA complex
Domain for 6ud7:
- Domain d6ud7c_: 6ud7 C: [378497]
  automated match to d2x1ba_
  complexed with ef6, gol
Domain for 6ue5:
- Domain d6ue5c_: 6ue5 C: [378487]
  automated match to d2x1ba_
  complexed with gol, q5j
Domain for 6ybs:
- Domain d6ybso_: 6ybs o: [393648]
  Other proteins in same PDB: d6ybsc_
  automated match to d2leba_
  complexed with 5mc, a2m, jmh, mg, psu, zn
Domain for 7eb1:
- Domain d7eb1a_: 7eb1 A: [421587]
  automated match to d5tbxa_

Mouse (Mus musculus) [TaxId:10090] [226227] (6 PDB entries)
1. Domain for 2dgo:
  - Domain d2dgoa1: 2dgo A:70-171 [264253]
    Other proteins in same PDB: d2dgoa2, d2dgoa3
    automated match to d2dgua_
2. Domain for 2dng:
  - Domain d2dnga1: 2dng A:33-122 [241624]
    Other proteins in same PDB: d2dnga2, d2dnga3
    automated match to d1wf2a_
3. Domain for 2e5i:
  - Domain d2e5ia1: 2e5i A:200-316 [241688]
    Other proteins in same PDB: d2e5ia2
    automated match to d1sjra_
4. Domain for 2rne:
  - Domain d2rnea1: 2rne A:89-190 [264505]
    Other proteins in same PDB: d2rnea2, d2rnea3
    automated match to d2dgua_
5. Domain for 2xsf:
  - Domain d2xsfa_: 2xsf A: [207329]
    automated match to d3md1b_
    complexed with gol, so4
6. Domain for 5x3y:
  - Domain d5x3ya1: 5x3y A:109-200 [342885]
    Other proteins in same PDB: d5x3ya2
    automated match to d2erra1
Nematode (Caenorhabditis elegans) [TaxId:6239] [258940] (1 PDB entry)
- Domain for 2mgz:
  - Domain d2mgza1: 2mgz A:97-189 [258941]
    Other proteins in same PDB: d2mgza2, d2mgzb1, d2mgzb2
    automated match to d1p1ta_
    protein/RNA complex
Norway rat (Rattus norvegicus) [TaxId:10116] [272199] (3 PDB entries)
1. Domain for 2mqm:
  - Domain d2mqma_: 2mqm A: [272200]
    automated match to d2e5ia_
2. Domain for 2mqo:
  - Domain d2mqoa_: 2mqo A: [280035]
    automated match to d3r27a_
    protein/RNA complex
3. Domain for 2mqp:
  - Domain d2mqpa_: 2mqp A: [280034]
    automated match to d2e5ia_
    protein/RNA complex
Plasmodium falciparum [TaxId:36329] [311778] (2 PDB entries)
1. Domain for 2myf:
  - Domain d2myfa1: 2myf A:1-86 [311779]
    Other proteins in same PDB: d2myfa2
    automated match to d2km8b_
2. Domain for 2n3l:
  - Domain d2n3la1: 2n3l A:1-86 [319806]
    Other proteins in same PDB: d2n3la2
    automated match to d2erra1
Tobacco (Nicotiana tabacum) [TaxId:4097] [256225] (1 PDB entry)
- Domain for 4c7q:
  - Domain d4c7qa1: 4c7q A:1-85 [251346]
    Other proteins in same PDB: d4c7qa2
    automated match to d2cqba1

More info for Protein automated matches from d.58.7.0: automated matches

Timeline for Protein automated matches from d.58.7.0: automated matches:

Protein automated matches from d.58.7.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from d.58.7.0: automated matches appears in SCOPe 2.07