Lineage for Protein: Transducin (alpha subunit)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2110099Family c.37.1.8: G proteins [52592] (79 protein domains)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 2111040Protein Transducin (alpha subunit) [52623] (4 species)
    common fold is interrupted with an all-alpha domain

Species:

  1. 2111041Cow (Bos taurus) [TaxId:9913] [52624] (18 PDB entries)
    Uniprot P04896 39-388
    1. Domain for 1azs:
    2. Domains for 1azt:
      1. 2111049Domain d1azta2: 1azt A:35-65,A:202-391 [32084]
        Other proteins in same PDB: d1azta1, d1aztb1
        complexed with gsp, mg, po4
      2. 2111050Domain d1aztb2: 1azt B:35-69,B:202-391 [32085]
        Other proteins in same PDB: d1azta1, d1aztb1
        complexed with gsp, mg, po4
    3. Domain for 1cjk:
    4. Domain for 1cjt:
    5. Domain for 1cju:
    6. Domain for 1cjv:
    7. Domain for 1cs4:
    8. Domain for 1cul:
    9. Domains for 1tad:
      1. 2111042Domain d1tada2: 1tad A:27-56,A:178-342 [32077]
        Other proteins in same PDB: d1tada1, d1tadb1, d1tadc1
        complexed with alf, ca, cac, gdp
      2. 2111043Domain d1tadb2: 1tad B:27-56,B:178-342 [32078]
        Other proteins in same PDB: d1tada1, d1tadb1, d1tadc1
        complexed with alf, ca, cac, gdp
      3. 2111044Domain d1tadc2: 1tad C:27-56,C:178-344 [32079]
        Other proteins in same PDB: d1tada1, d1tadb1, d1tadc1
        complexed with alf, ca, cac, gdp
    10. Domain for 1tag:
    11. Domain for 1tl7:
    12. Domains for 1tnd:
      1. 2111046Domain d1tnda2: 1tnd A:27-56,A:178-349 [32081]
        Other proteins in same PDB: d1tnda1, d1tndb1, d1tndc1
        complexed with cac, gsp, mg
      2. 2111047Domain d1tndb2: 1tnd B:27-56,B:178-342 [32082]
        Other proteins in same PDB: d1tnda1, d1tndb1, d1tndc1
        complexed with cac, gsp, mg
      3. 2111048Domain d1tndc2: 1tnd C:27-56,C:178-342 [32083]
        Other proteins in same PDB: d1tnda1, d1tndb1, d1tndc1
        complexed with cac, gsp, mg
    13. Domain for 1u0h:
    14. Domain for 2gvd:
    15. Domain for 2gvz:
    16. Domain for 3c14:
    17. Domain for 3c15:
    18. Domain for 3c16:
  2. 2111065Human (Homo sapiens) [TaxId:9606] [159560] (9 PDB entries)
    1. Domains for 1y3a:
      1. 2111072Domain d1y3aa2: 1y3a A:34-60,A:182-345 [122583]
        Other proteins in same PDB: d1y3aa1, d1y3ab1, d1y3ac1, d1y3ad1
        automatically matched to d1kjya2
        complexed with gdp
      2. 2111073Domain d1y3ab2: 1y3a B:34-60,B:182-344 [122585]
        Other proteins in same PDB: d1y3aa1, d1y3ab1, d1y3ac1, d1y3ad1
        automatically matched to d1kjya2
        complexed with gdp
      3. 2111074Domain d1y3ac2: 1y3a C:34-60,C:182-344 [122587]
        Other proteins in same PDB: d1y3aa1, d1y3ab1, d1y3ac1, d1y3ad1
        automatically matched to d1kjya2
        complexed with gdp
      4. 2111075Domain d1y3ad2: 1y3a D:34-60,D:182-344 [122589]
        Other proteins in same PDB: d1y3aa1, d1y3ab1, d1y3ac1, d1y3ad1
        automatically matched to d1kjya2
        complexed with gdp
    2. Domains for 2g83:
      1. 2111079Domain d2g83a2: 2g83 A:33-60,A:182-345 [134763]
        Other proteins in same PDB: d2g83a1, d2g83b1
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
      2. 2111080Domain d2g83b2: 2g83 B:33-60,B:182-345 [134765]
        Other proteins in same PDB: d2g83a1, d2g83b1
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
    3. Domains for 2gtp:
      1. 2111070Domain d2gtpa2: 2gtp A:32-60,A:182-348 [135679]
        Other proteins in same PDB: d2gtpa1, d2gtpb1, d2gtpc_, d2gtpd_
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
      2. 2111071Domain d2gtpb2: 2gtp B:32-60,B:182-348 [135681]
        Other proteins in same PDB: d2gtpa1, d2gtpb1, d2gtpc_, d2gtpd_
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
    4. Domains for 2ik8:
      1. 2111076Domain d2ik8a2: 2ik8 A:32-60,A:182-348 [137485]
        Other proteins in same PDB: d2ik8a1, d2ik8b1, d2ik8c1, d2ik8d_
        automatically matched to d1kjya2
        complexed with alf, gdp, mg, so4
      2. 2111077Domain d2ik8c2: 2ik8 C:33-60,C:182-348 [137487]
        Other proteins in same PDB: d2ik8a1, d2ik8b1, d2ik8c1, d2ik8d_
        automatically matched to d1kjya2
        complexed with alf, gdp, mg, so4
    5. Domains for 2om2:
      1. 2111068Domain d2om2a2: 2om2 A:31-60,A:182-349 [148862]
        Other proteins in same PDB: d2om2a1, d2om2a3, d2om2c1, d2om2c3
        automatically matched to d1kjya2
        complexed with gdp, mg
      2. 2111069Domain d2om2c2: 2om2 C:1031-1060,C:1182-1347 [148864]
        Other proteins in same PDB: d2om2a1, d2om2a3, d2om2c1, d2om2c3
        automatically matched to d1kjya2
        complexed with gdp, mg
    6. Domain for 2pz2:
    7. Domain for 2pz3:
    8. Domain for 3umr:
    9. Domain for 3ums:
  3. 2111082Mouse (Mus musculus) [TaxId:10090] [142225] (5 PDB entries)
    Uniprot P21279 38-66,184-354! Uniprot P27600 53-81,204-370! Uniprot P27601 47-75,202-372
    1. Domains for 1zca:
      1. 2111087Domain d1zcaa2: 1zca A:54-82,A:205-371 [124898]
        Other proteins in same PDB: d1zcaa1, d1zcab1
        G alpha i/12
        complexed with alf, gdp, mg
      2. 2111088Domain d1zcab2: 1zca B:54-82,B:205-370 [124900]
        Other proteins in same PDB: d1zcaa1, d1zcab1
        automated match to d1zcaa2
        complexed with alf, gdp, mg
    2. Domain for 1zcb:
    3. Domain for 2bcj:
    4. Domains for 2rgn:
      1. 2111089Domain d2rgna2: 2rgn A:38-66,A:184-354 [152013]
        Other proteins in same PDB: d2rgna1, d2rgnc1, d2rgnd1, d2rgnf1
        automatically matched to d2bcjq2
        complexed with alf, gdp, mg
      2. 2111090Domain d2rgnd2: 2rgn D:38-66,D:184-354 [152016]
        Other proteins in same PDB: d2rgna1, d2rgnc1, d2rgnd1, d2rgnf1
        automatically matched to d2bcjq2
        complexed with alf, gdp, mg
    5. Domains for 3ab3:
      1. 2111084Domain d3ab3a1: 3ab3 A:47-75,A:202-372 [208192]
        Other proteins in same PDB: d3ab3a2, d3ab3b_, d3ab3c2
        automated match to d1zcba2
        complexed with alf, gdp, mg
      2. 2111085Domain d3ab3c1: 3ab3 C:47-75,C:202-368 [208194]
        Other proteins in same PDB: d3ab3a2, d3ab3b_, d3ab3c2
        automated match to d1zcba2
        complexed with alf, gdp, mg
  4. 2111091Norway rat (Rattus norvegicus) [TaxId:10116] [52625] (21 PDB entries)
    Uniprot P10824
    1. Domains for 1agr:
      1. 2111107Domain d1agra2: 1agr A:5-60,A:182-354 [32111]
        Other proteins in same PDB: d1agra1, d1agrd1, d1agre_, d1agrh_
        complexed with alf, cit, gdp, mg
      2. 2111108Domain d1agrd2: 1agr D:11-60,D:182-354 [32112]
        Other proteins in same PDB: d1agra1, d1agrd1, d1agre_, d1agrh_
        complexed with alf, cit, gdp, mg
    2. Domain for 1as0:
    3. Domain for 1as2:
    4. Domain for 1as3:
    5. Domain for 1bh2:
    6. Domain for 1bof:
    7. Domain for 1cip:
    8. Domains for 1fqj:
      1. 2111114Domain d1fqja2: 1fqj A:28-60,A:182-344 [32098]
        Other proteins in same PDB: d1fqja1, d1fqjb_, d1fqjc_, d1fqjd1, d1fqje_
        complexed with alf, gdp, mg
      2. 2111115Domain d1fqjd2: 1fqj D:28-60,D:182-342 [32099]
        Other proteins in same PDB: d1fqja1, d1fqjb_, d1fqjc_, d1fqjd1, d1fqje_
        complexed with alf, gdp, mg
    9. Domains for 1fqk:
      1. 2111116Domain d1fqka2: 1fqk A:28-60,A:182-345 [32103]
        Other proteins in same PDB: d1fqka1, d1fqkb_, d1fqkc1, d1fqkd_
        species chimera
        complexed with alf, gdp, mg
      2. 2111117Domain d1fqkc2: 1fqk C:29-60,C:182-345 [32104]
        Other proteins in same PDB: d1fqka1, d1fqkb_, d1fqkc1, d1fqkd_
        species chimera
        complexed with alf, gdp, mg
    10. Domain for 1gdd:
    11. Domain for 1gfi:
    12. Domain for 1gg2:
    13. Domain for 1gia:
    14. Domain for 1gil:
    15. Domain for 1git:
    16. Domain for 1got:
    17. Domain for 1gp2:
    18. Domains for 1kjy:
      1. 2111109Domain d1kjya2: 1kjy A:31-60,A:182-349 [72625]
        Other proteins in same PDB: d1kjya1, d1kjya3, d1kjyc1
        bound to the goloco motif of rgs14, chains B and D
        complexed with cs, gdp, mg
      2. 2111110Domain d1kjyc2: 1kjy C:1030-1060,C:1182-1347 [72627]
        Other proteins in same PDB: d1kjya1, d1kjya3, d1kjyc1
        bound to the goloco motif of rgs14, chains B and D
        complexed with cs, gdp, mg
    19. Domains for 1shz:
      1. 2111111Domain d1shza2: 1shz A:46-75,A:201-371 [118965]
        Other proteins in same PDB: d1shza1, d1shzc_, d1shzd1, d1shzf_
        complexed with alf, gdp, mg
      2. 2111112Domain d1shzd2: 1shz D:46-75,D:201-371 [118967]
        Other proteins in same PDB: d1shza1, d1shzc_, d1shzd1, d1shzf_
        automatically matched to 1SHZ A:46-75,A:201-371
        complexed with alf, gdp, mg
    20. Domain for 1svk:
    21. Domain for 1svs:

More info for Protein Transducin (alpha subunit) from c.37.1.8: G proteins

Timeline for Protein Transducin (alpha subunit) from c.37.1.8: G proteins: