Lineage for d1gdda2 (1gdd A:9-60,A:182-354)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2110099Family c.37.1.8: G proteins [52592] (79 protein domains)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 2111040Protein Transducin (alpha subunit) [52623] (4 species)
    common fold is interrupted with an all-alpha domain
  7. 2111091Species Norway rat (Rattus norvegicus) [TaxId:10116] [52625] (21 PDB entries)
    Uniprot P10824
  8. 2111100Domain d1gdda2: 1gdd A:9-60,A:182-354 [32101]
    Other proteins in same PDB: d1gdda1
    complexed with gdp, so4

Details for d1gdda2

PDB Entry: 1gdd (more details), 2.2 Å

PDB Description: tertiary and quaternary structural changes in gia1 induced by gtp hydrolysis
PDB Compounds: (A:) gi alpha 1

SCOPe Domain Sequences for d1gdda2:

Sequence, based on SEQRES records: (download)

>d1gdda2 c.37.1.8 (A:9-60,A:182-354) Transducin (alpha subunit) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
dkaaverskmidrnlredgekaarevkllllgagesgkstivkqmkiiheagXtgiveth
ftfkdlhfkmfdvggqrserkkwihcfegvtaiifcvalsdydlvlaedeemnrmhesmk
lfdsicnnkwftdtsiilflnkkdlfeekikksplticypeyagsntyeeaaayiqcqfe
dlnkrkdtkeiythftcatdtknvqfvfdavtdviiknnlkdcglf

Sequence, based on observed residues (ATOM records): (download)

>d1gdda2 c.37.1.8 (A:9-60,A:182-354) Transducin (alpha subunit) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
dkaaverskmidrnlredgekaarevkllllgagesgkstivkqmkiiheagXtgiveth
ftfkdlhfkmfdvvtaiifcvalsdydlvmnrmhesmklfdsicnnkwftdtsiilflnk
kdlfeekikksplticypeyagsntyeeaaayiqcqfedlnkrkdtkeiythftcatdtk
nvqfvfdavtdviiknnlkdcglf

SCOPe Domain Coordinates for d1gdda2:

Click to download the PDB-style file with coordinates for d1gdda2.
(The format of our PDB-style files is described here.)

Timeline for d1gdda2:

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Domains from same chain:
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d1gdda1