Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006336Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2006337Superfamily a.118.1: ARM repeat [48371] (26 families) (S)
  5. 2006908Family a.118.1.0: automated matches [191340] (1 protein)
    not a true family
  6. 2006909Protein automated matches [190220] (14 species)
    not a true protein
  7. 2006934Species Human (Homo sapiens) [TaxId:9606] [189070] (40 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 2jdq:
    1. 2006943Domain d2jdqa_: 2jdq A: [230912]
      Other proteins in same PDB: d2jdqd_, d2jdqe_
      automated match to d3tj3a_
      protein/RNA complex
    2. 2006944Domain d2jdqb_: 2jdq B: [238701]
      Other proteins in same PDB: d2jdqd_, d2jdqe_
      automated match to d2jdqa_
      protein/RNA complex
  2. Domain(s) for 2xzg:
  3. Domain(s) for 2xzh:
  4. Domain(s) for 3dbs:
  5. Domain(s) for 3fey:
  6. Domain(s) for 3jui:
  7. Domain(s) for 3l6x:
  8. Domain(s) for 3l6y:
    1. 2006962Domain d3l6yc_: 3l6y C: [247362]
      automated match to d1xm9a1
    2. 2006963Domain d3l6ye_: 3l6y E: [247363]
      automated match to d1xm9a1
  9. Domain(s) for 3mdj:
    1. 2006952Domain d3mdja4: 3mdj A:615-934 [247647]
      Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja3, d3mdjb1, d3mdjb2, d3mdjb3, d3mdjc1, d3mdjc2, d3mdjc3
      automated match to d2yd0a4
      complexed with bes, nag, zn
    2. 2006953Domain d3mdjb4: 3mdj B:615-934 [247651]
      Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja3, d3mdjb1, d3mdjb2, d3mdjb3, d3mdjc1, d3mdjc2, d3mdjc3
      automated match to d2yd0a4
      complexed with bes, nag, zn
    3. 2006954Domain d3mdjc4: 3mdj C:615-934 [247655]
      Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja3, d3mdjb1, d3mdjb2, d3mdjb3, d3mdjc1, d3mdjc2, d3mdjc3
      automated match to d2yd0a4
      complexed with bes, nag, zn
  10. Domain(s) for 3qnf:
    1. 2006960Domain d3qnfb4: 3qnf B:615-935 [248937]
      Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfa3, d3qnfb1, d3qnfb2, d3qnfb3, d3qnfc1, d3qnfc2, d3qnfc3
      automated match to d2yd0a4
      complexed with nag, zn
    2. 2006961Domain d3qnfc4: 3qnf C:615-937 [248941]
      Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfa3, d3qnfb1, d3qnfb2, d3qnfb3, d3qnfc1, d3qnfc2, d3qnfc3
      automated match to d2yd0a4
      complexed with nag, zn
  11. Domain(s) for 3se6:
    1. 2006967Domain d3se6a4: 3se6 A:638-960 [249388]
      Other proteins in same PDB: d3se6a1, d3se6a2, d3se6a3, d3se6a5, d3se6b1, d3se6b2, d3se6b3, d3se6b5
      automated match to d2yd0a4
      complexed with lys, mes, nag, zn
    2. 2006968Domain d3se6b4: 3se6 B:638-960 [249392]
      Other proteins in same PDB: d3se6a1, d3se6a2, d3se6a3, d3se6a5, d3se6b1, d3se6b2, d3se6b3, d3se6b5
      automated match to d2yd0a4
      complexed with lys, mes, nag, zn
  12. Domain(s) for 3tj3:
    1. 2006964Domain d3tj3a_: 3tj3 A: [216835]
      automated match to d1ee5a_
    2. 2006965Domain d3tj3b_: 3tj3 B: [216836]
      automated match to d1ee5a_
  13. Domain(s) for 3zvv:
  14. Domain(s) for 3zw3:
  15. Domain(s) for 4anu:
  16. Domain(s) for 4anv:
  17. Domain(s) for 4anw:
  18. Domain(s) for 4anx:
  19. Domain(s) for 4fyq:
  20. Domain(s) for 4fyr:
  21. Domain(s) for 4fyt:
  22. Domain(s) for 4g55:
  23. Domain(s) for 4hle:
  24. Domain(s) for 4j6i:
  25. Domain(s) for 4jbs:
    1. 2006971Domain d4jbsa4: 4jbs A:638-960 [252875]
      Other proteins in same PDB: d4jbsa1, d4jbsa2, d4jbsa3, d4jbsa5, d4jbsb1, d4jbsb2, d4jbsb3, d4jbsb5
      automated match to d2yd0a4
      complexed with imd, nag, p52, zn
    2. 2006972Domain d4jbsb4: 4jbs B:638-960 [252879]
      Other proteins in same PDB: d4jbsa1, d4jbsa2, d4jbsa3, d4jbsa5, d4jbsb1, d4jbsb2, d4jbsb3, d4jbsb5
      automated match to d2yd0a4
      complexed with imd, nag, p52, zn
  26. Domain(s) for 4p8q:
    1. 2006973Domain d4p8qa4: 4p8q A:707-1025 [261384]
      Other proteins in same PDB: d4p8qa1, d4p8qa2, d4p8qa3, d4p8qb1, d4p8qb2, d4p8qb3
      automated match to d3se6b4
      complexed with nag, unl, zn
    2. 2006974Domain d4p8qb4: 4p8q B:707-1025 [263459]
      Other proteins in same PDB: d4p8qa1, d4p8qa2, d4p8qa3, d4p8qb1, d4p8qb2, d4p8qb3
      automated match to d4p8qa4
      complexed with nag, unl, zn
  27. Domain(s) for 4pj6:
    1. 2006969Domain d4pj6a4: 4pj6 A:707-1025 [267177]
      Other proteins in same PDB: d4pj6a1, d4pj6a2, d4pj6a3, d4pj6b1, d4pj6b2, d4pj6b3
      automated match to d4p8qa4
      complexed with lys, nag, zn
    2. 2006970Domain d4pj6b4: 4pj6 B:707-1025 [267181]
      Other proteins in same PDB: d4pj6a1, d4pj6a2, d4pj6a3, d4pj6b1, d4pj6b2, d4pj6b3
      automated match to d4p8qa4
      complexed with lys, nag, zn
  28. Domain(s) for 4uad:
  29. Domain(s) for 4uae:
  30. Domain(s) for 4urk:
  31. Domain(s) for 5aen:
  32. Domain(s) for 5cu5:
    1. 2006976Domain d5cu5a4: 5cu5 A:638-960 [277109]
      Other proteins in same PDB: d5cu5a1, d5cu5a2, d5cu5a3, d5cu5a5, d5cu5b1, d5cu5b2, d5cu5b3, d5cu5b5
      automated match to d3se6a4
      complexed with man, nag
    2. 2006977Domain d5cu5b4: 5cu5 B:638-960 [277114]
      Other proteins in same PDB: d5cu5a1, d5cu5a2, d5cu5a3, d5cu5a5, d5cu5b1, d5cu5b2, d5cu5b3, d5cu5b5
      automated match to d3se6a4
      complexed with man, nag
  33. Domain(s) for 5fwq:
  34. Domain(s) for 5g2n:
  35. Domain(s) for 5g55:
  36. Domain(s) for 5j6s:
    1. 2287721Domain d5j6sb4: 5j6s B:638-960 [331022]
      Other proteins in same PDB: d5j6sa1, d5j6sa2, d5j6sa3, d5j6sa5, d5j6sb1, d5j6sb2, d5j6sb3, d5j6sb5
      automated match to d3se6a4
      complexed with 6ga, bma, man, nag, zn
    2. 2287733Domain d5j6sa4: 5j6s A:638-960 [331034]
      Other proteins in same PDB: d5j6sa1, d5j6sa2, d5j6sa3, d5j6sa5, d5j6sb1, d5j6sb2, d5j6sb3, d5j6sb5
      automated match to d3se6a4
      complexed with 6ga, bma, man, nag, zn
  37. Domain(s) for 5k1v:
    1. 2289059Domain d5k1vb3: 5k1v B:638-960 [332360]
      Other proteins in same PDB: d5k1va1, d5k1va2, d5k1va3, d5k1va5, d5k1vb1, d5k1vb2
      automated match to d3se6a4
      complexed with 6px, man, nag, zn
    2. 2289089Domain d5k1va4: 5k1v A:638-960 [332390]
      Other proteins in same PDB: d5k1va1, d5k1va2, d5k1va3, d5k1va5, d5k1vb1, d5k1vb2
      automated match to d3se6a4
      complexed with 6px, man, nag, zn
  38. Domain(s) for 5lhd:
    1. 2289287Domain d5lhdc4: 5lhd C:637-967 [332588]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
    2. 2289313Domain d5lhdd4: 5lhd D:637-967 [332614]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
    3. 2289373Domain d5lhdb4: 5lhd B:637-967 [332674]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
    4. 2289386Domain d5lhda4: 5lhd A:637-967 [332687]
      Other proteins in same PDB: d5lhda1, d5lhda2, d5lhda3, d5lhdb1, d5lhdb2, d5lhdb3, d5lhdc1, d5lhdc2, d5lhdc3, d5lhdd1, d5lhdd2, d5lhdd3
      automated match to d4fyta4
      complexed with bma, edo, nag, zn
  39. Domain(s) for 5mj6:
    1. 2289404Domain d5mj6a4: 5mj6 A:707-1025 [332705]
      Other proteins in same PDB: d5mj6a1, d5mj6a2, d5mj6a3, d5mj6a5, d5mj6b1, d5mj6b2, d5mj6b3, d5mj6b5
      automated match to d4pj6a4
      complexed with 7o2, bma, br, man, nag, zn
    2. 2289432Domain d5mj6b4: 5mj6 B:707-1025 [332733]
      Other proteins in same PDB: d5mj6a1, d5mj6a2, d5mj6a3, d5mj6a5, d5mj6b1, d5mj6b2, d5mj6b3, d5mj6b5
      automated match to d4pj6a4
      complexed with 7o2, bma, br, man, nag, zn
  40. Domain(s) for 5xzx:

More info for Species Human (Homo sapiens) [TaxId:9606] from a.118.1.0 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from a.118.1.0 automated matches: