SCOPe 2.08: Domain d3qnfb2: 3qnf B:255-529

Lineage for d3qnfb2 (3qnf B:255-529)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.92: Zincin-like [55485] (2 superfamilies)
   contains mixed beta sheet with connection over free side of the sheet

4. Superfamily d.92.1: Metalloproteases ('zincins'), catalytic domain [55486] (18 families)

5. Family d.92.1.0: automated matches [191495] (1 protein)
   not a true family

6. Protein automated matches [190805] (20 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188286] (69 PDB entries)

8. Domain d3qnfb2: 3qnf B:255-529 [248935]
   Other proteins in same PDB: d3qnfa1, d3qnfa3, d3qnfb1, d3qnfb3, d3qnfb4, d3qnfc1, d3qnfc3, d3qnfc4
   automated match to d2yd0a2
   complexed with nag, zn

Details for d3qnfb2

PDB Entry: 3qnf, 3 Å

PDB Description: crystal structure of the open state of human endoplasmic reticulum aminopeptidase 1 erap1

PDB Compounds: (B:) endoplasmic reticulum aminopeptidase 1

SCOPe Domain Sequences for d3qnfb2:

Sequence, based on SEQRES records:

>d3qnfb2 d.92.1.0 (B:255-529) automated matches {Human (Homo sapiens) [TaxId: 9606]}
esvskitksgvkvsvyavpdkinqadyaldaavtllefyedyfsipyplpkqdlaaipdf
qsgamenwglttyresallfdaekssassklgitmtvahelahqwfgnlvtmewwndlwl
negfakfmefvsvsvthpelkvgdyffgkcfdamevdalnsshpvstpvenpaqiremfd
dvsydkgacilnmlreylsadafksgivqylqkhsykntknedlwdsmasicptdgvkgm
dgfcsrsqhssssshwhqegvdvktmmntwtlqkg

Sequence, based on observed residues (ATOM records):

>d3qnfb2 d.92.1.0 (B:255-529) automated matches {Human (Homo sapiens) [TaxId: 9606]}
esvskitksgvkvsvyavpdkinqadyaldaavtllefyedyfsipyplpkqdlaaipdf
qsgamenwglttyresallfdaekssassklgitmtvahelahqwfgnlvtmewwndlwl
negfakfmefvsvsvthpelkvgdyffgkcfdamevdalnsshpvstpvenpmfddvsyd
kgacilnmlreylsadafksgivqylqkhsykntknedlwdsmasivdvktmmntwtlqk
g

Timeline for d3qnfb2:

• d3qnfb2 first appeared in SCOPe 2.04
  
• d3qnfb2 appears in SCOPe 2.07