Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3005547Fold d.187: Photosystem I subunit PsaD [64233] (1 superfamily)
    beta-BETA(2)-beta-alpha-beta(2); antiparallel sheet: order 2134 packed against helix and BETA-hairpin on the same side; irregular C-terminal tail
  4. 3005548Superfamily d.187.1: Photosystem I subunit PsaD [64234] (1 family) (S)
    automatically mapped to Pfam PF02531
  5. 3005549Family d.187.1.1: Photosystem I subunit PsaD [64235] (2 proteins)
  6. 3005562Protein automated matches [236562] (8 species)
    not a true protein

Species:

  1. 3005563Chaetoceros gracilis [TaxId:184592] [391007] (1 PDB entry)
  2. 3005565Chlorella ohadii [TaxId:2649997] [420092] (2 PDB entries)
    1. Domain for 6zzx:
    2. Domain for 6zzy:
  3. 3005568Dunaliella salina [TaxId:3046] [388376] (1 PDB entry)
  4. 3005570Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [370481] (7 PDB entries)
    1. Domain for 6ijj:
    2. Domain for 6jo5:
    3. Domain for 6jo6:
    4. Domain for 7bgi:
    5. Domain for 7blx:
    6. Domain for 7dz7:
    7. Domain for 7dz8:
  5. 3005576Nostoc sp. [TaxId:103690] [375588] (1 PDB entry)
  6. 3005578Pea (Pisum sativum) [TaxId:3888] [276208] (9 PDB entries)
    1. Domain for 4rku:
    2. Domain for 4xk8:
    3. Domain for 4y28:
    4. Domain for 5l8r:
    5. Domain for 6yac:
    6. Domain for 6yez:
    7. Domain for 6zoo:
    8. Domain for 6zxs:
    9. Domain for 7dkz:
  7. 3005588Synechocystis sp. [TaxId:1111708] [347289] (2 PDB entries)
    1. Domains for 5oy0:
      1. 3005589Domain d5oy04_: 5oy0 4: [347290]
        Other proteins in same PDB: d5oy00_, d5oy01_, d5oy02_, d5oy03_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0a_, d5oy0b_, d5oy0c_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d1jb0d_
        complexed with 45d, act, bcr, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd, zex
      2. 3005590Domain d5oy0d_: 5oy0 D: [347880]
        Other proteins in same PDB: d5oy00_, d5oy01_, d5oy02_, d5oy03_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0a_, d5oy0b_, d5oy0c_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d1jb0d_
        complexed with 45d, act, bcr, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd, zex
    2. Domains for 6uzv:
      1. 3005591Domain d6uzv4_: 6uzv 4: [392514]
        Other proteins in same PDB: d6uzv0_, d6uzv1_, d6uzv2_, d6uzv3_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzv8_, d6uzva_, d6uzvb_, d6uzvc_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvk_, d6uzvl_
        automated match to d5oy0d_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
      2. 3005592Domain d6uzvd_: 6uzv d: [392506]
        Other proteins in same PDB: d6uzv0_, d6uzv1_, d6uzv2_, d6uzv3_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzv8_, d6uzva_, d6uzvb_, d6uzvc_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvk_, d6uzvl_
        automated match to d5oy0d_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
  8. 3005593Synechocystis sp. [TaxId:1148] [236566] (1 PDB entry)

More info for Protein automated matches from d.187.1.1: Photosystem I subunit PsaD

Timeline for Protein automated matches from d.187.1.1: Photosystem I subunit PsaD: