PDB entry 6zxs

View 6zxs on RCSB PDB site
Description: Cold grown Pea Photosystem I
Class: photosynthesis
Keywords: photosynthesis
Deposited on 2020-07-30, released 2021-07-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-07, with a file datestamp of 2021-07-02.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: Lhca1
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZXS (0-192)
    Domains in SCOPe 2.08: d6zxs1_
  • Chain '2':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6zxs2_
  • Chain '3':
    Compound: Chlorophyll a-b binding protein 3, chloroplastic
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6zxs3_
  • Chain '4':
    Compound: chlorophyll a-b binding protein p4, chloroplastic
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9SQL2 (0-197)
      • conflict (37)
      • conflict (76)
      • conflict (97)
    Domains in SCOPe 2.08: d6zxs4_
  • Chain 'A':
    Compound: photosystem I p700 chlorophyll a apoprotein a1
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6zxsa_
  • Chain 'B':
    Compound: photosystem I p700 chlorophyll a apoprotein a2
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6zxsb_
  • Chain 'C':
    Compound: photosystem I iron-sulfur center
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6zxsc_
  • Chain 'D':
    Compound: PsaD
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZXS (0-142)
    Domains in SCOPe 2.08: d6zxsd_
  • Chain 'E':
    Compound: PsaE
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZXS (0-65)
    Domains in SCOPe 2.08: d6zxse1, d6zxse2
  • Chain 'F':
    Compound: Photosystem I reaction center subunit III
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0M3KL12 (0-153)
      • conflict (2)
      • conflict (9)
      • conflict (30)
      • conflict (33)
      • conflict (56)
      • conflict (110)
      • conflict (126-127)
    Domains in SCOPe 2.08: d6zxsf_
  • Chain 'G':
    Compound: PsaG
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ZXS (0-96)
  • Chain 'H':
    Compound: Photosystem I reaction center subunit VI
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0M3KL10 (0-87)
      • conflict (7)
      • conflict (26-27)
      • conflict (63)
      • conflict (73)
      • conflict (81)
      • insertion (86)
  • Chain 'I':
    Compound: Photosystem I reaction center subunit VIII
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Photosystem I reaction center subunit IX
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • Uniprot D5MAL3 (0-41)
      • conflict (31)
    Domains in SCOPe 2.08: d6zxsj_
  • Chain 'K':
    Compound: Photosystem I reaction center subunit X psaK
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E1C9L3 (0-79)
      • conflict (39)
  • Chain 'L':
    Compound: PsaL domain-containing protein
    Species: Pisum sativum [TaxId:3888]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E1C9L1 (0-156)
      • conflict (3)
      • conflict (25)
      • conflict (34)
      • conflict (40)
      • conflict (54)
      • conflict (89)
      • conflict (103)
      • conflict (118)
      • conflict (147)
    Domains in SCOPe 2.08: d6zxsl_
  • Heterogens: CL0, CLA, PQN, SF4, BCR, LHG, LMT, LMG, GOL, DGD, CA, ZEX, LUT, CHL, XAT

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxs1 (1:)
dwmpgqprpsyldgsapgdfgfdplrlgevpenlerfkeselihcrwamlavpgilvpea
lglgnwvkaqewaalpggqatylgnpvpwgtlptilvieflsiafvehqrsmekdpekkk
ypggafdplgyskdpkkfheykikevkngrlallafvgicvqqsaypgtgplenlathla
dpwhntignvlip

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxs2 (2:)
tvaepdrplwfpgstpppwldgslpgdfgfdplglgsdpeslrwnvqaelvhsrwamlga
agifipefltklgilntpswytageqeyftdtttlfivelvfigwaegrrwadilnpgcv
ntdpifpnnkltgtdvgypgglwfdplgwgsaspqklkelrtkeikngrlamlavmgawf
qhiytgtgpidnlfahladpghatifaa

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxs3 (3:)
rplwfaskqslsyldgslpgdygfdplglsdpegtggfieprwlaygevingrfamlgav
gaiapeylgkvglipqetalawfqtgvippagtynywadnytlfvlemalmgfaehrrfq
dwakpgsmgkqyflglekgfggsgnpaypggpffnplgfgkdekslkelklkevkngrla
mlailgyfiqglvtgvgpyqnlldhvadpvnnnvltslkfh

  • Chain '4':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxs4 (4:)
kkgewlpglaspgyltgslpgdngfdplglaedpenlkwfvqaelvngrwamlgvagmll
pevftsigiinvpkwydagkeeyfassstlfviefilfhyveirrwqdiknpgsvnqdpi
fkqyslpagevgypggifnplnfaptleakekeiangrlamlaflgfiiqhnvtgkgpfd
nllqhisdpwhntivqtl

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsA (A:)
pevkilvdrdpiktsfeqwakpghfsrtiakgpdtttwiwnlhadahdfdshtsdleeis
rkvfsahfgqlsiiflwlsgmyfhgarfsnyeawlndpthirpsaqvvwpivgqeilngd
vgggfrgiqitsgffqiwrasgitselqlyctaigalvfaalmlfagwfhyhkaapklvw
fqdvesmlnhhlagllglgslswaghqvhvslpinqflnagvdpkeiplphefilnrdll
aqlypsfaegatpfftlnwskyadfltfrggldpltgglwltdiahhhlaiailfliagh
myrtnwgighgikdileahkgpftgqghkglyeilttswhaqlsinlamlgsltiivahh
myamppypylatdygtqlslfthhmwiggflivgaaahaaifmvrdydpttryndlldrv
lrhrdaiishlnwvciflgfhsfglyihndtmsalgrpqdmfsdtaiqlqpvfaqwiqnt
halapgttapgattstsltwgggdlvsvggkvallpiplgtadflvhhihaftihvtvli
llkgvlfarssrlipdkanlgfrfpcdgpgrggtcqvsawdhvflglfwmynaisvvifh
fswkmqsdvwgsindqgvvthitggnfaqssitingwlrdflwaqasqviqsygsslsay
glfflgahfvwafslmflfsgrgywqeliesivwahnklkvapatqpralsivqgravgv
thyllggiattwafflariiavg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsB (B:)
alrfprfsqglaqdpttrriwfgiatahdfeshdditegrlyqnifashfgqlaiiflwt
sgnlfhvawqgnfeawvqdplhvrpiahaiwdphfgqpaveaftrggalgpvniaysgvy
qwwytiglrtnedlytgaifllflsfisllagwlhlqpkwkpsvswfknaesrlnhhlsg
lfgvsslawaghlvhvaipgsrgeyvrwnnflsvlphpqglgplftgqwnlyaqnpdssn
hlfstsqgagtailtllggfhpqtqslwltdmahhhlaiailfligghmyrtnfgighsi
kyileahippggrlgrghkglydtinnsihfqlglalaslgvitslvaqhmyslpayafi
aqdfttqaalythhqyiagfimtgafahgaiffirdynpeqnadnvlarmlehkeaiish
lswaslflgfhtlglyvhndvmlafgtpekqiliepifaqwiqsahgktsygfdvllsst
nspalnagrsiwlpgwlnainensnslfltigpgdflvhhaialglhtttlilvkgalda
rgsklmpdkkdfgysfpcdgpgrggtcdisawdafylavfwmlntigwvtfywhwkhitl
wqgnvsqfnesstylmgwlrdylwlnssqlingynpfgmnslsvwawmflfghlvwatgf
mfliswrgywqelietlawahertplanlirwrdkpvalsivqarlvglvhfsvgyifty
aafliastsgkfg

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsC (C:)
shsvkiydtcigctqcvracptdvlemipwggckakqiasaprtedcvgckrcesacptd
flsvrvylwhettrsmglay

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsD (D:)
gftppeldpntpspifggstggllrkaqveefyvitwespkeqifemptggaaimregpn
llklarkeqclalgtrlrskykikyqfyrvfpsgevqylhpkdgvypekvnpgrqgvgvn
frsigknvspievkftgkqpydl

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsE (E:)
ppigpkrgakvkilrqesywykgtgsvvavdqdpntrypvvvrfnkvnyanvstnnyald
eveevk

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsF (F:)
diagltpckdskqfakrekqsikklesslklyapdsapalainatiektkrrfdnygkqg
llcgadglphlivsgdqrhwgefitpgilflyiagwigwvgrsyliairddkkptqkeii
idvplatglvfrgfswpiaayrellngelvakdv

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsJ (J:)
mrdlktylsvapvastlwfaalagllieinrffpdaltfpff

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6zxsL (L:)
yqvvqpingdpfigsletpvtssplvawylsnlpgyrtavnpllrgievglahgfllvgp
fvkagplrnteiagqagslaagglvvilsicltiygissfnegdpstapsltltgrkkqp
dqlqtadgwakftggfffggisgviwaffllyvldlp