Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2891301Fold c.61: PRTase-like [53270] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
  4. 2891302Superfamily c.61.1: PRTase-like [53271] (3 families) (S)
  5. 2891861Family c.61.1.0: automated matches [191528] (1 protein)
    not a true family
  6. 2891862Protein automated matches [190891] (38 species)
    not a true protein

Species:

  1. 2891863Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [259286] (5 PDB entries)
    1. Domains for 4qyi:
      1. 2891866Domain d4qyia_: 4qyi A: [259287]
        automated match to d1r3ub_
        complexed with epe, gol, mg, po4
      2. 2891867Domain d4qyib_: 4qyi B: [259288]
        automated match to d1r3ub_
        complexed with epe, gol, mg, po4
      3. 2891868Domain d4qyic_: 4qyi C: [263784]
        automated match to d4rqba_
        complexed with epe, gol, mg, po4
      4. 2891869Domain d4qyid_: 4qyi D: [263785]
        automated match to d4rqba_
        complexed with epe, gol, mg, po4
      5. 2891870Domain d4qyie_: 4qyi E: [263786]
        automated match to d4rqba_
        complexed with epe, gol, mg, po4
    2. Domains for 4rv4:
      1. 2891871Domain d4rv4a1: 4rv4 A:1-210 [261976]
        Other proteins in same PDB: d4rv4a2, d4rv4b2, d4rv4c2
        automated match to d3oscb_
        complexed with peg, prp
      2. 2891872Domain d4rv4c1: 4rv4 C:1-210 [261977]
        Other proteins in same PDB: d4rv4a2, d4rv4b2, d4rv4c2
        automated match to d3oscb_
        complexed with peg, prp
    3. Domains for 6d9q:
      1. 2891873Domain d6d9qa1: 6d9q A:1-180 [368378]
        Other proteins in same PDB: d6d9qa2, d6d9qb2, d6d9qc2, d6d9qd2
        automated match to d4rqba_
        complexed with gol, so4
      2. 2891874Domain d6d9qb1: 6d9q B:1-179 [368339]
        Other proteins in same PDB: d6d9qa2, d6d9qb2, d6d9qc2, d6d9qd2
        automated match to d4rqba_
        complexed with gol, so4
      3. 2891875Domain d6d9qc1: 6d9q C:1-180 [368421]
        Other proteins in same PDB: d6d9qa2, d6d9qb2, d6d9qc2, d6d9qd2
        automated match to d4rqba_
        complexed with gol, so4
      4. 2891876Domain d6d9qd1: 6d9q D:1-179 [368308]
        Other proteins in same PDB: d6d9qa2, d6d9qb2, d6d9qc2, d6d9qd2
        automated match to d4rqba_
        complexed with gol, so4
    4. Domains for 6d9r:
      1. 2891864Domain d6d9ra1: 6d9r A:1-179 [368328]
        Other proteins in same PDB: d6d9ra2, d6d9rb2
        automated match to d4rqba_
        complexed with 9dg, act, edo, mg, peg, prp
      2. 2891865Domain d6d9rb1: 6d9r B:1-179 [368368]
        Other proteins in same PDB: d6d9ra2, d6d9rb2
        automated match to d4rqba_
        complexed with 9dg, act, edo, mg, peg, prp
    5. Domains for 6d9s:
      1. 2891877Domain d6d9sa1: 6d9s A:1-179 [368413]
        Other proteins in same PDB: d6d9sa2, d6d9sb2
        automated match to d4rqba_
        complexed with g4p, mg, peg
      2. 2891878Domain d6d9sb1: 6d9s B:1-179 [368313]
        Other proteins in same PDB: d6d9sa2, d6d9sb2
        automated match to d4rqba_
        complexed with g4p, mg, peg
  2. 2891879Aquifex aeolicus [TaxId:63363] [188297] (1 PDB entry)
  3. 2891884Bacillus anthracis [TaxId:261594] [189450] (7 PDB entries)
    1. Domains for 3h83:
      1. 2891886Domain d3h83a1: 3h83 A:-10-179 [210903]
        Other proteins in same PDB: d3h83a2, d3h83b2, d3h83c2, d3h83d2
        automated match to d1r3ub_
        complexed with po4
      2. 2891887Domain d3h83b1: 3h83 B:1-179 [210904]
        Other proteins in same PDB: d3h83a2, d3h83b2, d3h83c2, d3h83d2
        automated match to d1r3ub_
        complexed with po4
      3. 2891888Domain d3h83c1: 3h83 C:1-179 [210905]
        Other proteins in same PDB: d3h83a2, d3h83b2, d3h83c2, d3h83d2
        automated match to d1r3ub_
        complexed with po4
      4. 2891889Domain d3h83d1: 3h83 D:1-179 [210906]
        Other proteins in same PDB: d3h83a2, d3h83b2, d3h83c2, d3h83d2
        automated match to d1r3ub_
        complexed with po4
    2. Domains for 3hvu:
      1. 2891894Domain d3hvua1: 3hvu A:1-179 [211309]
        Other proteins in same PDB: d3hvua2, d3hvub2, d3hvuc2, d3hvud2
        automated match to d1r3ub_
        complexed with mes, na
      2. 2891895Domain d3hvub1: 3hvu B:1-179 [211310]
        Other proteins in same PDB: d3hvua2, d3hvub2, d3hvuc2, d3hvud2
        automated match to d1r3ub_
        complexed with mes, na
      3. 2891896Domain d3hvuc1: 3hvu C:1-179 [211311]
        Other proteins in same PDB: d3hvua2, d3hvub2, d3hvuc2, d3hvud2
        automated match to d1r3ub_
        complexed with mes, na
      4. 2891897Domain d3hvud1: 3hvu D:1-179 [211312]
        Other proteins in same PDB: d3hvua2, d3hvub2, d3hvuc2, d3hvud2
        automated match to d1r3ub_
        complexed with mes, na
    3. Domains for 3kb8:
      1. 2891890Domain d3kb8a1: 3kb8 A:-10-179 [212268]
        Other proteins in same PDB: d3kb8a2, d3kb8b2, d3kb8c2, d3kb8d2
        automated match to d1r3ub_
        complexed with 5gp, gol, mg, po4
      2. 2891891Domain d3kb8b1: 3kb8 B:1-180 [212269]
        Other proteins in same PDB: d3kb8a2, d3kb8b2, d3kb8c2, d3kb8d2
        automated match to d1r3ub_
        complexed with 5gp, gol, mg, po4
      3. 2891892Domain d3kb8c1: 3kb8 C:1-179 [212270]
        Other proteins in same PDB: d3kb8a2, d3kb8b2, d3kb8c2, d3kb8d2
        automated match to d1r3ub_
        complexed with 5gp, gol, mg, po4
      4. 2891893Domain d3kb8d1: 3kb8 D:1-179 [212271]
        Other proteins in same PDB: d3kb8a2, d3kb8b2, d3kb8c2, d3kb8d2
        automated match to d1r3ub_
        complexed with 5gp, gol, mg, po4
    4. Domain for 3m3h:
    5. Domains for 3o7m:
      1. 2891898Domain d3o7ma_: 3o7m A: [182857]
        automated match to d1r3ub_
        complexed with bme, gol, so4
      2. 2891899Domain d3o7mb_: 3o7m B: [182858]
        automated match to d1r3ub_
        complexed with bme, gol, so4
      3. 2891900Domain d3o7mc_: 3o7m C: [182859]
        automated match to d1r3ub_
        complexed with bme, gol, so4
      4. 2891901Domain d3o7md_: 3o7m D: [182860]
        automated match to d1r3ub_
        complexed with bme, gol, so4
    6. Domains for 3osc:
      1. 2891903Domain d3osca1: 3osc A:1-210 [306119]
        Other proteins in same PDB: d3osca2, d3oscb2, d3oscc2
        automated match to d4rv4b_
        complexed with peg, prp
      2. 2891904Domain d3oscb1: 3osc B:1-210 [306121]
        Other proteins in same PDB: d3osca2, d3oscb2, d3oscc2
        automated match to d4rv4b_
        complexed with peg, prp
      3. 2891905Domain d3oscc1: 3osc C:1-210 [306123]
        Other proteins in same PDB: d3osca2, d3oscb2, d3oscc2
        automated match to d4rv4b_
        complexed with peg, prp
    7. Domain for 4rv4:
  4. 2891906Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188318] (4 PDB entries)
    1. Domain for 2pry:
    2. Domains for 2prz:
      1. 2891910Domain d2prza_: 2prz A: [167253]
        automated match to d1lh0a_
        complexed with cl, omp
      2. 2891911Domain d2przb_: 2prz B: [167254]
        automated match to d1lh0a_
        complexed with cl, omp
      3. 2891912Domain d2przc_: 2prz C: [167255]
        automated match to d1lh0a_
        complexed with cl, omp
      4. 2891913Domain d2przd_: 2prz D: [167256]
        automated match to d1lh0a_
        complexed with cl, omp
    3. Domains for 2ps1:
      1. 2891908Domain d2ps1a_: 2ps1 A: [167257]
        automated match to d1lh0a_
        complexed with mg, oro, prp
      2. 2891909Domain d2ps1b_: 2ps1 B: [167258]
        automated match to d1lh0a_
        complexed with mg, oro, prp
    4. Domain for 4wml:
  5. 2891915Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [280077] (1 PDB entry)
  6. 2891917Blood fluke (Schistosoma mansoni) [TaxId:6183] [331002] (1 PDB entry)
  7. 2891922Brachybacterium faecium [TaxId:446465] [258122] (1 PDB entry)
  8. 2891931Burkholderia cenocepacia [TaxId:216591] [236647] (1 PDB entry)
  9. 2891938Burkholderia pseudomallei [TaxId:320372] [225468] (1 PDB entry)
  10. 2891945Escherichia coli K-12 [TaxId:83333] [225227] (1 PDB entry)
  11. 2891948Escherichia coli [TaxId:562] [188368] (2 PDB entries)
    1. Domains for 2ehj:
      1. 2891949Domain d2ehja1: 2ehj A:2-208 [164034]
        Other proteins in same PDB: d2ehja2, d2ehjb2, d2ehjc2, d2ehjd2
        automated match to d1i5ea_
        complexed with so4
      2. 2891950Domain d2ehjb1: 2ehj B:2-208 [164035]
        Other proteins in same PDB: d2ehja2, d2ehjb2, d2ehjc2, d2ehjd2
        automated match to d1i5ea_
        complexed with so4
      3. 2891951Domain d2ehjc1: 2ehj C:2-208 [164036]
        Other proteins in same PDB: d2ehja2, d2ehjb2, d2ehjc2, d2ehjd2
        automated match to d1i5ea_
        complexed with so4
      4. 2891952Domain d2ehjd1: 2ehj D:2-208 [164037]
        Other proteins in same PDB: d2ehja2, d2ehjb2, d2ehjc2, d2ehjd2
        automated match to d1i5ea_
        complexed with so4
    2. Domains for 4s2u:
      1. 2891953Domain d4s2ua1: 4s2u A:2-162 [311552]
        automated match to d1dkua1
        complexed with mg
      2. 2891954Domain d4s2ua2: 4s2u A:163-309 [311553]
        automated match to d1dkra2
        complexed with mg
  12. 2891955Escherichia coli [TaxId:83334] [362641] (1 PDB entry)
  13. 2891962Francisella tularensis [TaxId:119856] [225884] (1 PDB entry)
  14. 2891967Francisella tularensis [TaxId:263] [348987] (3 PDB entries)
    1. Domains for 5yw2:
      1. 2891976Domain d5yw2a1: 5yw2 A:1-175 [348995]
        Other proteins in same PDB: d5yw2a2, d5yw2b2, d5yw2c2, d5yw2d2
        automated match to d2dy0b_
        complexed with cl, mg, so4
      2. 2891977Domain d5yw2b1: 5yw2 B:1-175 [349022]
        Other proteins in same PDB: d5yw2a2, d5yw2b2, d5yw2c2, d5yw2d2
        automated match to d2dy0b_
        complexed with cl, mg, so4
      3. 2891978Domain d5yw2c1: 5yw2 C:1-175 [349062]
        Other proteins in same PDB: d5yw2a2, d5yw2b2, d5yw2c2, d5yw2d2
        automated match to d2dy0b_
        complexed with cl, mg, so4
      4. 2891979Domain d5yw2d1: 5yw2 D:1-175 [349097]
        Other proteins in same PDB: d5yw2a2, d5yw2b2, d5yw2c2, d5yw2d2
        automated match to d2dy0b_
        complexed with cl, mg, so4
    2. Domains for 5yw5:
      1. 2891968Domain d5yw5a1: 5yw5 A:1-175 [349016]
        Other proteins in same PDB: d5yw5a2, d5yw5b2
        automated match to d2dy0b_
        complexed with ade
      2. 2891969Domain d5yw5b1: 5yw5 B:1-175 [348988]
        Other proteins in same PDB: d5yw5a2, d5yw5b2
        automated match to d2dy0b_
        complexed with ade
      3. 2891970Domain d5yw5c_: 5yw5 C: [349076]
        Other proteins in same PDB: d5yw5a2, d5yw5b2
        automated match to d2dy0b_
        complexed with ade
      4. 2891971Domain d5yw5d_: 5yw5 D: [349070]
        Other proteins in same PDB: d5yw5a2, d5yw5b2
        automated match to d2dy0b_
        complexed with ade
    3. Domains for 6igs:
      1. 2891972Domain d6igsa_: 6igs A: [374988]
        automated match to d3acba_
        complexed with so4, zn
      2. 2891973Domain d6igsb_: 6igs B: [374954]
        automated match to d3acba_
        complexed with so4, zn
      3. 2891974Domain d6igsc_: 6igs C: [374964]
        automated match to d3acba_
        complexed with so4, zn
      4. 2891975Domain d6igsd_: 6igs D: [374969]
        automated match to d3acba_
        complexed with so4, zn
  15. 2891980Human (Homo sapiens) [TaxId:9606] [225156] (13 PDB entries)
    1. Domains for 2h06:
      1. 2891983Domain d2h06a1: 2h06 A:3-160 [204477]
        automated match to d2c4ka1
        complexed with so4
      2. 2891984Domain d2h06a2: 2h06 A:161-313 [204478]
        automated match to d2c4ka2
        complexed with so4
      3. 2891985Domain d2h06b1: 2h06 B:3-160 [204479]
        automated match to d2c4ka1
        complexed with so4
      4. 2891986Domain d2h06b2: 2h06 B:161-317 [204480]
        automated match to d2c4ka2
        complexed with so4
    2. Domains for 2h07:
      1. 2891991Domain d2h07a1: 2h07 A:3-160 [204481]
        automated match to d2c4ka1
        complexed with so4; mutant
      2. 2891992Domain d2h07a2: 2h07 A:161-313 [204482]
        automated match to d2c4ka2
        complexed with so4; mutant
      3. 2891993Domain d2h07b1: 2h07 B:3-160 [204483]
        automated match to d2c4ka1
        complexed with so4; mutant
      4. 2891994Domain d2h07b2: 2h07 B:161-317 [204484]
        automated match to d2c4ka2
        complexed with so4; mutant
    3. Domains for 2h08:
      1. 2891999Domain d2h08a1: 2h08 A:3-160 [204485]
        automated match to d2c4ka1
        complexed with so4; mutant
      2. 2892000Domain d2h08a2: 2h08 A:161-313 [204486]
        automated match to d2c4ka2
        complexed with so4; mutant
      3. 2892001Domain d2h08b1: 2h08 B:3-160 [204487]
        automated match to d2c4ka1
        complexed with so4; mutant
      4. 2892002Domain d2h08b2: 2h08 B:161-317 [204488]
        automated match to d2c4ka2
        complexed with so4; mutant
    4. Domains for 2hcr:
      1. 2891987Domain d2hcra1: 2hcr A:3-160 [204534]
        automated match to d2c4ka1
        complexed with amp, cd, so4
      2. 2891988Domain d2hcra2: 2hcr A:161-313 [204535]
        automated match to d2c4ka2
        complexed with amp, cd, so4
      3. 2891989Domain d2hcrb1: 2hcr B:3-160 [204536]
        automated match to d2c4ka1
        complexed with amp, cd, so4
      4. 2891990Domain d2hcrb2: 2hcr B:161-317 [204537]
        automated match to d2c4ka2
        complexed with amp, cd, so4
    5. Domains for 2ji4:
      1. 2892007Domain d2ji4a1: 2ji4 A:19-178 [205047]
        automated match to d2c4ka1
        complexed with cl
      2. 2892008Domain d2ji4a2: 2ji4 A:179-368 [205048]
        automated match to d2c4ka2
        complexed with cl
    6. Domains for 2wns:
      1. 2891981Domain d2wnsa_: 2wns A: [206910]
        Other proteins in same PDB: d2wnsb2
        automated match to d2aeea1
        complexed with cl, omp
      2. 2891982Domain d2wnsb1: 2wns B:8-203 [206911]
        Other proteins in same PDB: d2wnsb2
        automated match to d2aeea1
        complexed with cl, omp
    7. Domains for 3efh:
      1. 2892013Domain d3efha1: 3efh A:3-160 [209486]
        automated match to d2c4ka1
        complexed with so4
      2. 2892014Domain d3efha2: 3efh A:161-316 [209487]
        automated match to d2c4ka2
        complexed with so4
      3. 2892015Domain d3efhb1: 3efh B:3-160 [209488]
        automated match to d2c4ka1
        complexed with so4
      4. 2892016Domain d3efhb2: 3efh B:161-316 [209489]
        automated match to d2c4ka2
        complexed with so4
    8. Domains for 3s5j:
      1. 2892003Domain d3s5ja1: 3s5j A:3-160 [216213]
        automated match to d2c4ka1
        complexed with so4
      2. 2892004Domain d3s5ja2: 3s5j A:161-313 [216214]
        automated match to d2c4ka2
        complexed with so4
      3. 2892005Domain d3s5jb1: 3s5j B:3-160 [216215]
        automated match to d2c4ka1
        complexed with so4
      4. 2892006Domain d3s5jb2: 3s5j B:161-317 [216216]
        automated match to d2c4ka2
        complexed with so4
    9. Domains for 4f8e:
      1. 2891995Domain d4f8ea1: 4f8e A:2-160 [221084]
        automated match to d2c4ka1
        complexed with mg, so4; mutant
      2. 2891996Domain d4f8ea2: 4f8e A:161-316 [221085]
        automated match to d2c4ka2
        complexed with mg, so4; mutant
      3. 2891997Domain d4f8eb1: 4f8e B:3-160 [221086]
        automated match to d2c4ka1
        complexed with mg, so4; mutant
      4. 2891998Domain d4f8eb2: 4f8e B:161-317 [221087]
        automated match to d2c4ka2
        complexed with mg, so4; mutant
    10. Domains for 4lyg:
      1. 2892025Domain d4lyga1: 4lyg A:3-160 [270251]
        automated match to d3s5ja1
        complexed with so4; mutant
      2. 2892026Domain d4lyga2: 4lyg A:161-313 [270253]
        automated match to d4f8ea2
        complexed with so4; mutant
      3. 2892027Domain d4lygb1: 4lyg B:3-160 [270252]
        automated match to d3s5ja1
        complexed with so4; mutant
      4. 2892028Domain d4lygb2: 4lyg B:161-317 [270254]
        automated match to d4f8ea2
        complexed with so4; mutant
    11. Domains for 4lzn:
      1. 2892017Domain d4lzna1: 4lzn A:3-160 [270255]
        automated match to d3s5ja1
        complexed with so4; mutant
      2. 2892018Domain d4lzna2: 4lzn A:161-313 [270256]
        automated match to d4f8ea2
        complexed with so4; mutant
      3. 2892019Domain d4lznb1: 4lzn B:3-160 [270257]
        automated match to d3s5ja1
        complexed with so4; mutant
      4. 2892020Domain d4lznb2: 4lzn B:161-317 [270258]
        automated match to d4f8ea2
        complexed with so4; mutant
    12. Domains for 4m0p:
      1. 2892009Domain d4m0pa1: 4m0p A:3-160 [270261]
        automated match to d3s5ja1
        complexed with so4; mutant
      2. 2892010Domain d4m0pa2: 4m0p A:161-313 [270262]
        automated match to d4f8ea2
        complexed with so4; mutant
      3. 2892011Domain d4m0pb1: 4m0p B:3-160 [270265]
        automated match to d3s5ja1
        complexed with so4; mutant
      4. 2892012Domain d4m0pb2: 4m0p B:161-317 [270266]
        automated match to d4f8ea2
        complexed with so4; mutant
    13. Domains for 4m0u:
      1. 2892021Domain d4m0ua1: 4m0u A:3-160 [270263]
        automated match to d3s5ja1
        complexed with so4; mutant
      2. 2892022Domain d4m0ua2: 4m0u A:161-312 [270264]
        automated match to d4f8ea2
        complexed with so4; mutant
      3. 2892023Domain d4m0ub1: 4m0u B:3-160 [270259]
        automated match to d3s5ja1
        complexed with so4; mutant
      4. 2892024Domain d4m0ub2: 4m0u B:161-317 [270260]
        automated match to d4f8ea2
        complexed with so4; mutant
  16. 2892029Klebsiella pneumoniae [TaxId:72407] [385212] (1 PDB entry)
  17. 2892040Legionella pneumophila [TaxId:272624] [313792] (1 PDB entry)
  18. 2892043Legionella pneumophila [TaxId:446] [361924] (1 PDB entry)
  19. 2892048Legionella pneumophila [TaxId:933093] [313815] (1 PDB entry)
  20. 2892051Leptospira interrogans [TaxId:267671] [258497] (1 PDB entry)
  21. 2892054Mycobacterium smegmatis [TaxId:246196] [333421] (1 PDB entry)
  22. 2892061Mycobacterium tuberculosis [TaxId:83332] [272972] (5 PDB entries)
    1. Domains for 4rhu:
      1. 2892066Domain d4rhua_: 4rhu A: [272974]
        automated match to d3kb8b_
        complexed with 3qe, 45t, mg
      2. 2892067Domain d4rhub_: 4rhu B: [272973]
        automated match to d3kb8b_
        complexed with 3qe, 45t, mg
      3. 2892068Domain d4rhuc_: 4rhu C: [272975]
        automated match to d3kb8b_
        complexed with 3qe, 45t, mg
      4. 2892069Domain d4rhud_: 4rhu D: [272976]
        automated match to d3kb8b_
        complexed with 3qe, 45t, mg
      5. 2892070Domain d4rhue_: 4rhu E: [272978]
        automated match to d3kb8b_
        complexed with 3qe, 45t, mg
      6. 2892071Domain d4rhuf_: 4rhu F: [272977]
        automated match to d3kb8b_
        complexed with 3qe, 45t, mg
    2. Domains for 5e38:
      1. 2892080Domain d5e38a1: 5e38 A:2-204 [278366]
        Other proteins in same PDB: d5e38a2, d5e38c2, d5e38d2
        automated match to d1o5oa_
        mutant
      2. 2892081Domain d5e38b_: 5e38 B: [278369]
        Other proteins in same PDB: d5e38a2, d5e38c2, d5e38d2
        automated match to d1i5ea_
        mutant
      3. 2892082Domain d5e38c1: 5e38 C:2-204 [278371]
        Other proteins in same PDB: d5e38a2, d5e38c2, d5e38d2
        automated match to d1i5ea_
        mutant
      4. 2892083Domain d5e38d1: 5e38 D:2-204 [278370]
        Other proteins in same PDB: d5e38a2, d5e38c2, d5e38d2
        automated match to d1i5ea_
        mutant
    3. Domains for 5knp:
      1. 2892062Domain d5knpa_: 5knp A: [339067]
        automated match to d4rhua_
        complexed with 6w7, mg, pop
      2. 2892063Domain d5knpb_: 5knp B: [339066]
        automated match to d4rhua_
        complexed with 6w7, mg, pop
      3. 2892064Domain d5knpc_: 5knp C: [339068]
        automated match to d4rhua_
        complexed with 6w7, mg, pop
      4. 2892065Domain d5knpd_: 5knp D: [339076]
        automated match to d4rhua_
        complexed with 6w7, mg, pop
    4. Domains for 5knq:
      1. 2892072Domain d5knqa_: 5knq A: [339062]
        automated match to d4rhua_
        complexed with 6w8, mg, pop
      2. 2892073Domain d5knqb_: 5knq B: [339063]
        automated match to d4rhua_
        complexed with 6w8, mg, pop
      3. 2892074Domain d5knqc_: 5knq C: [339075]
        automated match to d4rhua_
        complexed with 6w8, mg, pop
      4. 2892075Domain d5knqd_: 5knq D: [339065]
        automated match to d4rhua_
        complexed with 6w8, mg, pop
    5. Domains for 5kny:
      1. 2892076Domain d5knya_: 5kny A: [339089]
        automated match to d4rhua_
        complexed with mg, ypg
      2. 2892077Domain d5knyb_: 5kny B: [339064]
        automated match to d4rhua_
        complexed with mg, ypg
      3. 2892078Domain d5knyc_: 5kny C: [339088]
        automated match to d4rhua_
        complexed with mg, ypg
      4. 2892079Domain d5knyd_: 5kny D: [339077]
        automated match to d4rhua_
        complexed with mg, ypg
  23. 2892084Neisseria gonorrhoeae [TaxId:485] [334707] (1 PDB entry)
  24. 2892086Plasmodium falciparum [TaxId:5838] [226804] (2 PDB entries)
    1. Domains for 3ozf:
      1. 2892087Domain d3ozfa1: 3ozf A:1-228 [214601]
        Other proteins in same PDB: d3ozfa2, d3ozfb2
        automated match to d1qk3c_
        complexed with hpa, mg, po4, pop
      2. 2892088Domain d3ozfb1: 3ozf B:1-228 [214602]
        Other proteins in same PDB: d3ozfa2, d3ozfb2
        automated match to d1qk3c_
        complexed with hpa, mg, po4, pop
      3. 2892089Domain d3ozfc_: 3ozf C: [214603]
        Other proteins in same PDB: d3ozfa2, d3ozfb2
        automated match to d1qk3c_
        complexed with hpa, mg, po4, pop
      4. 2892090Domain d3ozfd_: 3ozf D: [214604]
        Other proteins in same PDB: d3ozfa2, d3ozfb2
        automated match to d1qk3c_
        complexed with hpa, mg, po4, pop
    2. Domains for 3ozg:
      1. 2892091Domain d3ozga_: 3ozg A: [214605]
        automated match to d1qk3c_
        complexed with mg, pop, ssi
      2. 2892092Domain d3ozgb_: 3ozg B: [214606]
        automated match to d1qk3c_
        complexed with mg, pop, ssi
      3. 2892093Domain d3ozgc_: 3ozg C: [214607]
        automated match to d1qk3c_
        complexed with mg, pop, ssi
      4. 2892094Domain d3ozgd_: 3ozg D: [214608]
        automated match to d1qk3c_
        complexed with mg, pop, ssi
  25. 2892095Rhodothermus marinus [TaxId:518766] [226752] (1 PDB entry)
  26. 2892100Shewanella pealeana [TaxId:398579] [226751] (1 PDB entry)
  27. 2892105Staphylococcus aureus [TaxId:451516] [261285] (2 PDB entries)
    1. Domain for 4rqa:
    2. Domains for 4rqb:
      1. 2892107Domain d4rqba_: 4rqb A: [261288]
        automated match to d3kb8b_
        complexed with cl, gol, so4, unl
      2. 2892108Domain d4rqbb_: 4rqb B: [261287]
        automated match to d3kb8b_
        complexed with cl, gol, so4, unl
  28. 2892109Streptococcus mutans [TaxId:1309] [255798] (1 PDB entry)
  29. 2892112Thale cress (Arabidopsis thaliana) [TaxId:3702] [384694] (1 PDB entry)
  30. 2892115Thermoanaerobacter pseudethanolicus [TaxId:340099] [224903] (1 PDB entry)
  31. 2892118Thermoplasma volcanium [TaxId:273116] [226149] (1 PDB entry)
  32. 2892123Thermoplasma volcanium [TaxId:50339] [226070] (3 PDB entries)
    1. Domains for 3lpn:
      1. 2892136Domain d3lpna1: 3lpn A:1-155 [212983]
        automated match to d1dkua1
        complexed with apc, so4
      2. 2892137Domain d3lpna2: 3lpn A:156-284 [212984]
        automated match to d1dkra2
        complexed with apc, so4
      3. 2892138Domain d3lpnb1: 3lpn B:1-155 [212985]
        automated match to d1dkua1
        complexed with apc, so4
      4. 2892139Domain d3lpnb2: 3lpn B:156-286 [212986]
        automated match to d1dkra2
        complexed with apc, so4
    2. Domains for 3lrt:
      1. 2892124Domain d3lrta1: 3lrt A:1-155 [212999]
        automated match to d1dkua1
        complexed with adp, so4
      2. 2892125Domain d3lrta2: 3lrt A:156-284 [213000]
        automated match to d1dkra2
        complexed with adp, so4
      3. 2892126Domain d3lrtb1: 3lrt B:1-155 [213001]
        automated match to d1dkua1
        complexed with adp, so4
      4. 2892127Domain d3lrtb2: 3lrt B:156-286 [213002]
        automated match to d1dkra2
        complexed with adp, so4
    3. Domains for 3mbi:
      1. 2892128Domain d3mbia1: 3mbi A:1-155 [213178]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkrb1
        complexed with adp, hsx, mg, po4
      2. 2892129Domain d3mbia2: 3mbi A:156-285 [213179]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkua2
        complexed with adp, hsx, mg, po4
      3. 2892130Domain d3mbib1: 3mbi B:1-155 [213180]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkrb1
        complexed with adp, hsx, mg, po4
      4. 2892131Domain d3mbib2: 3mbi B:156-285 [213181]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkua2
        complexed with adp, hsx, mg, po4
      5. 2892132Domain d3mbic1: 3mbi C:1-155 [213182]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkrb1
        complexed with adp, hsx, mg, po4
      6. 2892133Domain d3mbic2: 3mbi C:156-285 [213183]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkua2
        complexed with adp, hsx, mg, po4
      7. 2892134Domain d3mbid1: 3mbi D:1-155 [213184]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkrb1
        complexed with adp, hsx, mg, po4
      8. 2892135Domain d3mbid2: 3mbi D:156-285 [213185]
        Other proteins in same PDB: d3mbia3, d3mbib3
        automated match to d1dkua2
        complexed with adp, hsx, mg, po4
  33. 2892140Thermus thermophilus HB8 [TaxId:300852] [189206] (3 PDB entries)
    1. Domain for 3acb:
    2. Domain for 3acc:
    3. Domain for 3acd:
  34. 2892144Thermus thermophilus [TaxId:274] [335395] (6 PDB entries)
    1. Domain for 2yws:
    2. Domain for 2ywt:
    3. Domain for 2ywu:
    4. Domains for 5t3o:
      1. 2892150Domain d5t3oa1: 5t3o A:4-160 [335396]
        automated match to d2ji4a1
        complexed with adp, so4
      2. 2892151Domain d5t3oa2: 5t3o A:161-310 [344398]
        complexed with adp, so4
      3. 2892152Domain d5t3ob1: 5t3o B:4-160 [335468]
        automated match to d2ji4a1
        complexed with adp, so4
      4. 2892153Domain d5t3ob2: 5t3o B:161-310 [344399]
        complexed with adp, so4
      5. 2892154Domain d5t3oc1: 5t3o C:4-160 [335443]
        automated match to d2ji4a1
        complexed with adp, so4
      6. 2892155Domain d5t3oc2: 5t3o C:161-310 [344400]
        complexed with adp, so4
    5. Domains for 6fsp:
      1. 2892156Domain d6fspa_: 6fsp A: [366477]
        automated match to d1vchb_
      2. 2892157Domain d6fspb_: 6fsp B: [366421]
        automated match to d1vchb_
      3. 2892158Domain d6fspc_: 6fsp C: [366424]
        automated match to d1vchb_
      4. 2892159Domain d6fspd_: 6fsp D: [366429]
        automated match to d1vchb_
      5. 2892160Domain d6fspe_: 6fsp E: [366420]
        automated match to d1vchb_
      6. 2892161Domain d6fspf_: 6fsp F: [366407]
        automated match to d1vchb_
    6. Domains for 7awo:
      1. 2892147Domain d7awoa1: 7awo A:4-160 [394323]
        automated match to d2ji4a1
        complexed with adp, so4
      2. 2892148Domain d7awob1: 7awo B:4-160 [394311]
        automated match to d2ji4a1
        complexed with adp, so4
  35. 2892162Thermus thermophilus [TaxId:300852] [365687] (1 PDB entry)
  36. 2892169Trypanosoma brucei [TaxId:185431] [334698] (1 PDB entry)
  37. 2892172Vibrio cholerae [TaxId:666] [226764] (1 PDB entry)
  38. 2892181Yersinia pseudotuberculosis [TaxId:273123] [227797] (8 PDB entries)
    1. Domain for 4mb6:
    2. Domain for 5b6h:
    3. Domains for 5y07:
      1. 2892185Domain d5y07a_: 5y07 A: [355604]
        automated match to d4mb6a_
        complexed with mg, na, prp
      2. 2892186Domain d5y07b_: 5y07 B: [355635]
        automated match to d4mb6a_
        complexed with mg, na, prp
    4. Domains for 5y4a:
      1. 2892192Domain d5y4aa_: 5y4a A: [355908]
        automated match to d4mb6a_
        complexed with cd, na, so4
      2. 2892193Domain d5y4ab_: 5y4a B: [355895]
        automated match to d4mb6a_
        complexed with cd, na, so4
    5. Domains for 5zc7:
      1. 2892189Domain d5zc7a_: 5zc7 A: [365225]
        automated match to d4mb6a_
        complexed with act, ade, cl, na, ni
      2. 2892190Domain d5zc7b_: 5zc7 B: [365223]
        automated match to d4mb6a_
        complexed with act, ade, cl, na, ni
    6. Domain for 5zmi:
    7. Domains for 5znq:
      1. 2892183Domain d5znqa_: 5znq A: [367969]
        automated match to d4mb6a_
        complexed with ade, cl, na
      2. 2892184Domain d5znqb_: 5znq B: [367960]
        automated match to d4mb6a_
        complexed with ade, cl, na
    8. Domain for 5zoc:

More info for Protein automated matches from c.61.1.0: automated matches

Timeline for Protein automated matches from c.61.1.0: automated matches: