PDB entry 5vn4

View 5vn4 on RCSB PDB site
Description: Crystal structure of adenine phosphoribosyl transferase from Trypanosoma brucei in complex with AMP, pyrophosphate, and ribose-5-phosphate
Class: transferase
Keywords: SSGCID, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2017-04-28, released 2017-05-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.64 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenine phosphoribosyltransferase, putative
    Species: Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [TaxId:185431]
    Gene: Tb927.7.1780
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57V32 (8-242)
      • expression tag (6-7)
    Domains in SCOPe 2.08: d5vn4a1, d5vn4a2
  • Chain 'B':
    Compound: Adenine phosphoribosyltransferase, putative
    Species: Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [TaxId:185431]
    Gene: Tb927.7.1780
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vn4b_
  • Heterogens: ADE, HSX, PPV, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vn4A (A:)
mahhhhhhmslvevlpnyftlskdsplrkkfekvykwyspafsphdvprfaevgnitenp
evmrgirdffvdryknlqqpithilgfdsrgfllgpmiavelnvpfvlirkankiagvii
ksepytkeyaaeseecmtvrfgsfdknsrvvliddviatggtmlagvqlvdacgatlvev
agilgltflkgtqpahtfaggrysnvpfvtlvdetvlsdencgdplhhkgsriiscaeak
kli

    Sequence, based on observed residues (ATOM records): (download) 
    >5vn4A (A:)
hhmslvevlpnyftlskdsplrkkfekvykwyspafsphdvprfaevgnitenpevmrgi
rdffvdryknlqqpithilgfdsrgfllgpmiavelnvpfvlirkankiagviiksepyt
keyaaeseecmtvrfgsfdknsrvvliddviatggtmlagvqlvdacgatlvevagilgl
tflkgtqpahtfaggrysnvpfvtlvdetvlsdencgdplhhkgsriiscaeakkli

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vn4B (B:)
mahhhhhhmslvevlpnyftlskdsplrkkfekvykwyspafsphdvprfaevgnitenp
evmrgirdffvdryknlqqpithilgfdsrgfllgpmiavelnvpfvlirkankiagvii
ksepytkeyaaeseecmtvrfgsfdknsrvvliddviatggtmlagvqlvdacgatlvev
agilgltflkgtqpahtfaggrysnvpfvtlvdetvlsdencgdplhhkgsriiscaeak
kli

    Sequence, based on observed residues (ATOM records): (download) 
    >5vn4B (B:)
mslvevlpnyftlskdsplrkkfekvykwyspafsphdvprfaevgnitenpevmrgird
ffvdryknlqqpithilgfdsrgfllgpmiavelnvpfvlirkankiagviiksepytke
yeecmtvrfgsfdknsrvvliddviatggtmlagvqlvdacgatlvevagilgltflkgt
qpahtfaggrysnvpfvtlvdetvlsdencgdplhhkgsriiscaeakkli