Lineage for Protein: D-maltodextrin-binding protein, MBP

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2144293Family c.94.1.1: Phosphate binding protein-like [53851] (45 protein domains)
  6. 2144348Protein D-maltodextrin-binding protein, MBP [53862] (5 species)
    contains a few additional helices in the C-terminal extension; homologous to thiaminase I

Species:

  1. 2144349Alicyclobacillus acidocaldarius [TaxId:405212] [102690] (3 PDB entries)
    1. Domains for 1urd:
      1. 2144352Domain d1urda_: 1urd A: [99825]
        complexed with mlr
      2. 2144353Domain d1urdb_: 1urd B: [99826]
        complexed with mlr
    2. Domain for 1urg:
    3. Domains for 1urs:
      1. 2144350Domain d1ursa_: 1urs A: [99833]
        complexed with mlr
      2. 2144351Domain d1ursb_: 1urs B: [99834]
        complexed with mlr
  2. 2144355Escherichia coli K-12 [TaxId:83333] [159806] (11 PDB entries)
    1. Domain for 2mv0:
    2. Domain for 3csb:
    3. Domains for 3hpi:
      1. 2144359Domain d3hpia_: 3hpi A: [177758]
        automated match to d1anfa_
        complexed with act, suc, zn; mutant
      2. 2144360Domain d3hpib_: 3hpi B: [177759]
        automated match to d1anfa_
        complexed with act, suc, zn; mutant
    4. Domain for 3kjt:
    5. Domain for 3rlf:
    6. Domain for 3rum:
    7. Domain for 3vfj:
    8. Domain for 4khz:
    9. Domain for 4ki0:
    10. Domains for 5b3w:
      1. 2281058Domain d5b3wb1: 5b3w B:2-382 [324359]
        Other proteins in same PDB: d5b3wa2, d5b3wb2
        automated match to d3vfja_
        complexed with cit, mal
      2. 2281081Domain d5b3wa1: 5b3w A:2-380 [324382]
        Other proteins in same PDB: d5b3wa2, d5b3wb2
        automated match to d3vfja_
        complexed with cit, mal
    11. Domain for 5b3x:
  3. 2144366Escherichia coli [TaxId:562] [53863] (65 PDB entries)
    Uniprot P02928
    1. Domains for 1a7l:
      1. 2144442Domain d1a7la_: 1a7l A: [35787]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        complexed with mal
      2. 2144443Domain d1a7lb_: 1a7l B: [35788]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        complexed with mal
      3. 2144444Domain d1a7lc_: 1a7l C: [35789]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        complexed with mal
    2. Domain for 1anf:
    3. Domain for 1dmb:
    4. Domains for 1ez9:
      1. 2144381Domain d1ez9a_: 1ez9 A: [64925]
      2. 2144382Domain d1ez9b_: 1ez9 B: [64926]
    5. Domain for 1ezo:
    6. Domain for 1ezp:
    7. Domain for 1fqa:
    8. Domain for 1fqb:
    9. Domain for 1fqc:
    10. Domain for 1fqd:
    11. Domains for 1hsj:
      1. 2144416Domain d1hsja2: 1hsj A:1-372 [61238]
        Other proteins in same PDB: d1hsja1, d1hsjb1
        fusion protein with SarR
        protein/DNA complex; complexed with glc
      2. 2144417Domain d1hsjb2: 1hsj B:1-372 [61240]
        Other proteins in same PDB: d1hsja1, d1hsjb1
        fusion protein with SarR
        protein/DNA complex; complexed with glc
    12. Domain for 1iud:
      • 2144441Domain d1iuda_: 1iud A: [35786]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        complexed with mal; mutant
    13. Domain for 1jvx:
    14. Domain for 1jvy:
    15. Domain for 1jw4:
    16. Domain for 1jw5:
    17. Domains for 1lax:
      1. 2144370Domain d1laxa_: 1lax A: [84576]
        mutant
      2. 2144371Domain d1laxc_: 1lax C: [84577]
        mutant
    18. Domain for 1lls:
    19. Domains for 1mdp:
      1. 2144407Domain d1mdp1_: 1mdp 1: [35784]
        complexed with mal; mutant
      2. 2144408Domain d1mdp2_: 1mdp 2: [35785]
        complexed with mal; mutant
    20. Domain for 1mdq:
    21. Domain for 1mg1:
    22. Domain for 1mh3:
    23. Domain for 1mh4:
    24. Domain for 1mpb:
    25. Domain for 1mpc:
    26. Domain for 1mpd:
    27. Domain for 1n3w:
    28. Domain for 1n3x:
    29. Domain for 1nl5:
    30. Domains for 1nmu:
      1. 2144438Domain d1nmua1: 1nmu A:3-366 [80665]
        Other proteins in same PDB: d1nmua2, d1nmub_, d1nmuc2, d1nmud_
        chimera with yeast L30e ribosomal protein
        complexed with mtt
      2. 2144439Domain d1nmuc1: 1nmu C:3-366 [80667]
        Other proteins in same PDB: d1nmua2, d1nmub_, d1nmuc2, d1nmud_
        chimera with yeast L30e ribosomal protein
        complexed with mtt
    31. Domain for 1omp:
    32. Domain for 1peb:
    33. Domains for 1r6z:
      1. 2144445Domain d1r6za2: 1r6z A:1-371 [97170]
        Other proteins in same PDB: d1r6za1, d1r6zp1, d1r6zz1
        chimera with a PAZ domain
        complexed with mal, ni
      2. 2144446Domain d1r6zp2: 1r6z P:1-371 [97172]
        Other proteins in same PDB: d1r6za1, d1r6zp1, d1r6zz1
        chimera with a PAZ domain
        complexed with mal, ni
      3. 2144447Domain d1r6zz2: 1r6z Z:2-371 [97174]
        Other proteins in same PDB: d1r6za1, d1r6zp1, d1r6zz1
        chimera with a PAZ domain
        complexed with mal, ni
    34. Domain for 1svx:
    35. Domain for 1t0k:
    36. Domain for 1y4c:
    37. Domains for 1ytv:
      1. 2144375Domain d1ytva_: 1ytv A: [124016]
        automated match to d1anf__
        complexed with mal
      2. 2144376Domain d1ytvb_: 1ytv B: [124017]
        automated match to d1anf__
        complexed with mal
    38. Domain for 1ziu:
    39. Domain for 1zjl:
    40. Domain for 1zkb:
    41. Domain for 1zmg:
    42. Domain for 2d21:
    43. Domain for 2h25:
    44. Domain for 2klf:
    45. Domain for 2n44:
    46. Domain for 2n45:
    47. Domain for 2nvu:
    48. Domain for 2r6g:
    49. Domain for 2v93:
    50. Domain for 3mbp:
    51. Domain for 3pgf:
    52. Domain for 3puy:
    53. Domain for 3puz:
    54. Domain for 3pv0:
    55. Domains for 3ser:
      1. 2144404Domain d3sera1: 3ser A:2-359 [216364]
        Other proteins in same PDB: d3sera2, d3serc2
        automated match to d1a7lc_
        complexed with ca, cl, mal, zn
      2. 2144405Domain d3serc1: 3ser C:2-359 [216365]
        Other proteins in same PDB: d3sera2, d3serc2
        automated match to d1a7lc_
        complexed with ca, cl, mal, zn
    56. Domains for 3ses:
      1. 2144377Domain d3sesa1: 3ses A:2-359 [216366]
        Other proteins in same PDB: d3sesa2, d3sesc2
        automated match to d1a7lc_
        complexed with cl, cu, mal
      2. 2144378Domain d3sesc1: 3ses C:2-359 [216367]
        Other proteins in same PDB: d3sesa2, d3sesc2
        automated match to d1a7lc_
        complexed with cl, cu, mal
    57. Domains for 3set:
      1. 2144394Domain d3seta1: 3set A:2-359 [216368]
        Other proteins in same PDB: d3seta2, d3setc2
        automated match to d1a7lc_
        complexed with mal, ni
      2. 2144395Domain d3setc1: 3set C:3-359 [216369]
        Other proteins in same PDB: d3seta2, d3setc2
        automated match to d1a7lc_
        complexed with mal, ni
    58. Domain for 3seu:
    59. Domains for 3sev:
      1. 2144423Domain d3seva1: 3sev A:2-359 [249417]
        Other proteins in same PDB: d3seva2, d3sevc2, d3seve2
        automated match to d3pgfa_
        complexed with cl, mal, zn
      2. 2144424Domain d3sevc1: 3sev C:2-359 [249418]
        Other proteins in same PDB: d3seva2, d3sevc2, d3seve2
        automated match to d3pgfa_
        complexed with cl, mal, zn
      3. 2144425Domain d3seve1: 3sev E:2-359 [249419]
        Other proteins in same PDB: d3seva2, d3sevc2, d3seve2
        automated match to d3pgfa_
        complexed with cl, mal, zn
    60. Domain for 3sew:
    61. Domains for 3sex:
      1. 2144387Domain d3sexa1: 3sex A:2-359 [216372]
        Other proteins in same PDB: d3sexa2, d3sexc2
        automated match to d1a7lc_
        complexed with iod, mal, ni
      2. 2144388Domain d3sexc1: 3sex C:2-359 [216373]
        Other proteins in same PDB: d3sexa2, d3sexc2
        automated match to d1a7lc_
        complexed with iod, mal, ni
    62. Domains for 3sey:
      1. 2144383Domain d3seya1: 3sey A:1-359 [216374]
        Other proteins in same PDB: d3seya2, d3seyc2, d3seye2
        automated match to d1a7lc_
        complexed with act, gol, mal, zn
      2. 2144384Domain d3seyc1: 3sey C:1-359 [216375]
        Other proteins in same PDB: d3seya2, d3seyc2, d3seye2
        automated match to d1a7lc_
        complexed with act, gol, mal, zn
      3. 2144385Domain d3seye1: 3sey E:1-359 [216376]
        Other proteins in same PDB: d3seya2, d3seyc2, d3seye2
        automated match to d1a7lc_
        complexed with act, gol, mal, zn
    63. Domain for 4jkm:
    64. Domain for 4mbp:
    65. Domain for 5cbn:
  4. 2144449Pyrococcus furiosus [TaxId:2261] [53864] (1 PDB entry)
  5. 2144451Thermococcus litoralis [TaxId:2265] [64191] (1 PDB entry)
    trehalose maltose-binding protein

More info for Protein D-maltodextrin-binding protein, MBP from c.94.1.1: Phosphate binding protein-like

Timeline for Protein D-maltodextrin-binding protein, MBP from c.94.1.1: Phosphate binding protein-like: