Lineage for Protein: D-maltodextrin-binding protein, MBP

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2913609Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
    has additional insertions and/or extensions that are not grouped together
  6. 2913670Protein D-maltodextrin-binding protein, MBP [53862] (5 species)
    contains a few additional helices in the C-terminal extension; homologous to thiaminase I

Species:

  1. 2913671Alicyclobacillus acidocaldarius [TaxId:405212] [102690] (3 PDB entries)
    1. Domains for 1urd:
      1. 2913674Domain d1urda_: 1urd A: [99825]
        has additional insertions and/or extensions that are not grouped together
      2. 2913675Domain d1urdb_: 1urd B: [99826]
        has additional insertions and/or extensions that are not grouped together
    2. Domain for 1urg:
      • 2913676Domain d1urga_: 1urg A: [99828]
        has additional insertions and/or extensions that are not grouped together
    3. Domains for 1urs:
      1. 2913672Domain d1ursa_: 1urs A: [99833]
        has additional insertions and/or extensions that are not grouped together
      2. 2913673Domain d1ursb_: 1urs B: [99834]
        has additional insertions and/or extensions that are not grouped together
  2. 2913677Escherichia coli K-12 [TaxId:83333] [159806] (14 PDB entries)
    1. Domain for 2mv0:
      • 2913696Domain d2mv0a_: 2mv0 A: [261660]
        automated match to d3mbpa_
        has additional insertions and/or extensions that are not grouped together
    2. Domain for 3csb:
      • 2913690Domain d3csba2: 3csb A:5-370 [156960]
        Other proteins in same PDB: d3csba1
        automatically matched to d1mpba_
        complexed with 1pe, edo, mn, peg, pg4, pge
        has additional insertions and/or extensions that are not grouped together
    3. Domains for 3hpi:
      1. 2913682Domain d3hpia_: 3hpi A: [177758]
        automated match to d1anfa_
        complexed with act, zn; mutant
        has additional insertions and/or extensions that are not grouped together
      2. 2913683Domain d3hpib_: 3hpi B: [177759]
        automated match to d1anfa_
        complexed with act, zn; mutant
        has additional insertions and/or extensions that are not grouped together
    4. Domain for 3kjt:
      • 2913678Domain d3kjta_: 3kjt A: [179394]
        automated match to d1anfa_
        mutant
        has additional insertions and/or extensions that are not grouped together
    5. Domain for 3rlf:
    6. Domain for 3rum:
      • 2913679Domain d3ruma_: 3rum A: [216077]
        automated match to d1laxa_
        complexed with ipa, man, rst, so4
        has additional insertions and/or extensions that are not grouped together
    7. Domain for 3vfj:
      • 2913684Domain d3vfja_: 3vfj A: [261621]
        automated match to d3ruma_
        complexed with act, cac, gcs, man, nag, t55, zn
        has additional insertions and/or extensions that are not grouped together
    8. Domain for 4khz:
    9. Domain for 4ki0:
    10. Domains for 5b3w:
      1. 2913691Domain d5b3wa1: 5b3w A:2-380 [324382]
        Other proteins in same PDB: d5b3wa2, d5b3wb2
        automated match to d3vfja_
        complexed with cit
        has additional insertions and/or extensions that are not grouped together
      2. 2913692Domain d5b3wb1: 5b3w B:2-382 [324359]
        Other proteins in same PDB: d5b3wa2, d5b3wb2
        automated match to d3vfja_
        complexed with cit
        has additional insertions and/or extensions that are not grouped together
    11. Domain for 5b3x:
      • 2913694Domain d5b3xa_: 5b3x A: [324439]
        automated match to d3vfja_
        has additional insertions and/or extensions that are not grouped together
    12. Domain for 5b3y:
      • 2913681Domain d5b3ya_: 5b3y A: [345545]
        automated match to d5b3xa_
        has additional insertions and/or extensions that are not grouped together
    13. Domains for 5b3z:
      1. 2913686Domain d5b3za1: 5b3z A:2-402 [381270]
        Other proteins in same PDB: d5b3za2
        automated match to d5b3ya_
        has additional insertions and/or extensions that are not grouped together
      2. 2913687Domain d5b3zb_: 5b3z B: [381272]
        Other proteins in same PDB: d5b3za2
        automated match to d5b3ya_
        has additional insertions and/or extensions that are not grouped together
      3. 2913688Domain d5b3zc_: 5b3z C: [381273]
        Other proteins in same PDB: d5b3za2
        automated match to d5b3ya_
        has additional insertions and/or extensions that are not grouped together
      4. 2913689Domain d5b3zd_: 5b3z D: [381271]
        Other proteins in same PDB: d5b3za2
        automated match to d5b3ya_
        has additional insertions and/or extensions that are not grouped together
    14. Domain for 5zca:
      • 2913680Domain d5zcaa1: 5zca A:8-389 [356162]
        Other proteins in same PDB: d5zcaa2
        automated match to d5b3xa_
        complexed with cit
        has additional insertions and/or extensions that are not grouped together
  3. 2913697Escherichia coli [TaxId:562] [53863] (69 PDB entries)
    Uniprot P02928
    1. Domains for 1a7l:
      1. 2913782Domain d1a7la_: 1a7l A: [35787]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        has additional insertions and/or extensions that are not grouped together
      2. 2913783Domain d1a7lb_: 1a7l B: [35788]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        has additional insertions and/or extensions that are not grouped together
      3. 2913784Domain d1a7lc_: 1a7l C: [35789]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        has additional insertions and/or extensions that are not grouped together
    2. Domain for 1anf:
      • 2913701Domain d1anfa_: 1anf A: [35776]
        has additional insertions and/or extensions that are not grouped together
    3. Domain for 1dmb:
      • 2913722Domain d1dmba_: 1dmb A: [35779]
        has additional insertions and/or extensions that are not grouped together
    4. Domains for 1ez9:
      1. 2913720Domain d1ez9a_: 1ez9 A: [64925]
        has additional insertions and/or extensions that are not grouped together
      2. 2913721Domain d1ez9b_: 1ez9 B: [64926]
        has additional insertions and/or extensions that are not grouped together
    5. Domain for 1ezo:
      • 2913772Domain d1ezoa_: 1ezo A: [59539]
        has additional insertions and/or extensions that are not grouped together
    6. Domain for 1ezp:
      • 2913771Domain d1ezpa_: 1ezp A: [59540]
        has additional insertions and/or extensions that are not grouped together
    7. Domain for 1fqa:
      • 2913718Domain d1fqaa1: 1fqa A:2-370 [59984]
        Other proteins in same PDB: d1fqaa2
        has additional insertions and/or extensions that are not grouped together
    8. Domain for 1fqb:
      • 2913719Domain d1fqba1: 1fqb A:2-370 [59985]
        Other proteins in same PDB: d1fqba2
        has additional insertions and/or extensions that are not grouped together
    9. Domain for 1fqc:
      • 2913741Domain d1fqca1: 1fqc A:2-370 [59986]
        Other proteins in same PDB: d1fqca2
        has additional insertions and/or extensions that are not grouped together
    10. Domain for 1fqd:
      • 2913749Domain d1fqda1: 1fqd A:2-370 [59987]
        Other proteins in same PDB: d1fqda2
        has additional insertions and/or extensions that are not grouped together
    11. Domains for 1hsj:
      1. 2913742Domain d1hsja2: 1hsj A:1-372 [61238]
        Other proteins in same PDB: d1hsja1, d1hsjb1
        fusion protein with SarR
        protein/DNA complex; complexed with glc
        has additional insertions and/or extensions that are not grouped together
      2. 2913743Domain d1hsjb2: 1hsj B:1-372 [61240]
        Other proteins in same PDB: d1hsja1, d1hsjb1
        fusion protein with SarR
        protein/DNA complex; complexed with glc
        has additional insertions and/or extensions that are not grouped together
    12. Domain for 1iud:
      • 2913778Domain d1iuda_: 1iud A: [35786]
        insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
        mutant
        has additional insertions and/or extensions that are not grouped together
    13. Domain for 1jvx:
      • 2913747Domain d1jvxa_: 1jvx A: [63307]
        has additional insertions and/or extensions that are not grouped together
    14. Domain for 1jvy:
      • 2913725Domain d1jvya_: 1jvy A: [63308]
        has additional insertions and/or extensions that are not grouped together
    15. Domain for 1jw4:
      • 2913738Domain d1jw4a_: 1jw4 A: [67374]
        has additional insertions and/or extensions that are not grouped together
    16. Domain for 1jw5:
      • 2913727Domain d1jw5a_: 1jw5 A: [67375]
        has additional insertions and/or extensions that are not grouped together
    17. Domains for 1lax:
      1. 2913710Domain d1laxa_: 1lax A: [84576]
        mutant
        has additional insertions and/or extensions that are not grouped together
      2. 2913711Domain d1laxc_: 1lax C: [84577]
        mutant
        has additional insertions and/or extensions that are not grouped together
    18. Domain for 1lls:
      • 2913699Domain d1llsa_: 1lls A: [78096]
        complexed with xe
        has additional insertions and/or extensions that are not grouped together
    19. Domains for 1mdp:
      1. 2913739Domain d1mdp1_: 1mdp 1: [35784]
        mutant
        has additional insertions and/or extensions that are not grouped together
      2. 2913740Domain d1mdp2_: 1mdp 2: [35785]
        mutant
        has additional insertions and/or extensions that are not grouped together
    20. Domain for 1mdq:
      • 2913728Domain d1mdqa_: 1mdq A: [35783]
        mutant
        has additional insertions and/or extensions that are not grouped together
    21. Domain for 1mg1:
      • 2913785Domain d1mg1a1: 1mg1 A:6-370 [35790]
        Other proteins in same PDB: d1mg1a2
        chimera with HTLV-1 gp21 ectodomain
        complexed with cl
        has additional insertions and/or extensions that are not grouped together
    22. Domain for 1mh3:
      • 2913776Domain d1mh3a2: 1mh3 A:1-366 [79113]
        Other proteins in same PDB: d1mh3a1
        chimera with yeast a1 homeodomain
        has additional insertions and/or extensions that are not grouped together
    23. Domain for 1mh4:
      • 2913777Domain d1mh4a2: 1mh4 A:1-366 [79115]
        Other proteins in same PDB: d1mh4a1
        chimera with yeast a1 homeodomain
        has additional insertions and/or extensions that are not grouped together
    24. Domain for 1mpb:
      • 2913700Domain d1mpba_: 1mpb A: [35780]
        mutant
        has additional insertions and/or extensions that are not grouped together
    25. Domain for 1mpc:
      • 2913712Domain d1mpca_: 1mpc A: [35781]
        mutant
        has additional insertions and/or extensions that are not grouped together
    26. Domain for 1mpd:
      • 2913732Domain d1mpda_: 1mpd A: [35782]
        mutant
        has additional insertions and/or extensions that are not grouped together
    27. Domain for 1n3w:
      • 2913750Domain d1n3wa_: 1n3w A: [91608]
        has additional insertions and/or extensions that are not grouped together
    28. Domain for 1n3x:
      • 2913756Domain d1n3xa_: 1n3x A: [91609]
        has additional insertions and/or extensions that are not grouped together
    29. Domain for 1nl5:
      • 2913729Domain d1nl5a_: 1nl5 A: [91953]
        complexed with zn
        has additional insertions and/or extensions that are not grouped together
    30. Domains for 1nmu:
      1. 2913774Domain d1nmua1: 1nmu A:3-366 [80665]
        Other proteins in same PDB: d1nmua2, d1nmub_, d1nmuc2, d1nmud_
        chimera with yeast L30e ribosomal protein
        has additional insertions and/or extensions that are not grouped together
      2. 2913775Domain d1nmuc1: 1nmu C:3-366 [80667]
        Other proteins in same PDB: d1nmua2, d1nmub_, d1nmuc2, d1nmud_
        chimera with yeast L30e ribosomal protein
        has additional insertions and/or extensions that are not grouped together
    31. Domain for 1omp:
      • 2913730Domain d1ompa_: 1omp A: [35778]
        has additional insertions and/or extensions that are not grouped together
    32. Domain for 1peb:
      • 2913761Domain d1peba_: 1peb A: [94597]
        has additional insertions and/or extensions that are not grouped together
    33. Domains for 1r6z:
      1. 2913779Domain d1r6za2: 1r6z A:1-371 [97170]
        Other proteins in same PDB: d1r6za1, d1r6zp1, d1r6zz1
        chimera with a PAZ domain
        complexed with ni
        has additional insertions and/or extensions that are not grouped together
      2. 2913780Domain d1r6zp2: 1r6z P:1-371 [97172]
        Other proteins in same PDB: d1r6za1, d1r6zp1, d1r6zz1
        chimera with a PAZ domain
        complexed with ni
        has additional insertions and/or extensions that are not grouped together
      3. 2913781Domain d1r6zz2: 1r6z Z:2-371 [97174]
        Other proteins in same PDB: d1r6za1, d1r6zp1, d1r6zz1
        chimera with a PAZ domain
        complexed with ni
        has additional insertions and/or extensions that are not grouped together
    34. Domain for 1svx:
    35. Domain for 1t0k:
      • 2913765Domain d1t0ka1: 1t0k A:5-366 [106214]
        Other proteins in same PDB: d1t0ka2, d1t0kb_
        protein/RNA complex
        has additional insertions and/or extensions that are not grouped together
    36. Domain for 1y4c:
      • 2913713Domain d1y4ca1: 1y4c A:4-370 [264218]
        has additional insertions and/or extensions that are not grouped together
    37. Domains for 1ytv:
      1. 2913704Domain d1ytva_: 1ytv A: [124016]
        automated match to d1anf__
        has additional insertions and/or extensions that are not grouped together
      2. 2913705Domain d1ytvb_: 1ytv B: [124017]
        automated match to d1anf__
        has additional insertions and/or extensions that are not grouped together
    38. Domain for 1ziu:
      • 2913737Domain d1ziua1: 1ziu A:1-370 [125138]
        complexed with ni
        has additional insertions and/or extensions that are not grouped together
    39. Domain for 1zjl:
      • 2913736Domain d1zjla_: 1zjl A: [125152]
        automated match to d1anf__
        complexed with zn
        has additional insertions and/or extensions that are not grouped together
    40. Domain for 1zkb:
      • 2913746Domain d1zkba_: 1zkb A: [125181]
        automated match to d1anf__
        has additional insertions and/or extensions that are not grouped together
    41. Domain for 1zmg:
      • 2913757Domain d1zmga_: 1zmg A: [125362]
        automated match to d1anf__
        complexed with cu
        has additional insertions and/or extensions that are not grouped together
    42. Domain for 2d21:
      • 2913768Domain d2d21a_: 2d21 A: [131155]
        automated match to d3mbpa_
        has additional insertions and/or extensions that are not grouped together
    43. Domain for 2h25:
      • 2913769Domain d2h25a_: 2h25 A: [135989]
        automated match to d3mbpa_
        has additional insertions and/or extensions that are not grouped together
    44. Domain for 2klf:
      • 2913770Domain d2klfa_: 2klf A: [242551]
        automated match to d3mbpa_
        has additional insertions and/or extensions that are not grouped together
    45. Domain for 2n44:
      • 2913767Domain d2n44a_: 2n44 A: [274468]
        automated match to d1jvya_
        has additional insertions and/or extensions that are not grouped together
    46. Domain for 2n45:
      • 2913766Domain d2n45a_: 2n45 A: [274467]
        automated match to d1jvya_
        has additional insertions and/or extensions that are not grouped together
    47. Domain for 2nvu:
    48. Domain for 2r6g:
    49. Domain for 2v93:
      • 2913773Domain d2v93a_: 2v93 A: [243849]
        automated match to d3mbpa_
        complexed with mxt
        has additional insertions and/or extensions that are not grouped together
    50. Domain for 3mbp:
      • 2913702Domain d3mbpa_: 3mbp A: [35775]
        has additional insertions and/or extensions that are not grouped together
    51. Domain for 3pgf:
    52. Domain for 3puy:
    53. Domain for 3puz:
    54. Domain for 3pv0:
    55. Domains for 3ser:
      1. 2913733Domain d3sera1: 3ser A:2-359 [216364]
        Other proteins in same PDB: d3sera2, d3serc2
        automated match to d1a7lc_
        complexed with ca, cl, zn
        has additional insertions and/or extensions that are not grouped together
      2. 2913734Domain d3serc1: 3ser C:2-359 [216365]
        Other proteins in same PDB: d3sera2, d3serc2
        automated match to d1a7lc_
        complexed with ca, cl, zn
        has additional insertions and/or extensions that are not grouped together
    56. Domains for 3ses:
      1. 2913714Domain d3sesa1: 3ses A:2-359 [216366]
        Other proteins in same PDB: d3sesa2, d3sesc2
        automated match to d1a7lc_
        complexed with cl, cu
        has additional insertions and/or extensions that are not grouped together
      2. 2913715Domain d3sesc1: 3ses C:2-359 [216367]
        Other proteins in same PDB: d3sesa2, d3sesc2
        automated match to d1a7lc_
        complexed with cl, cu
        has additional insertions and/or extensions that are not grouped together
    57. Domains for 3set:
      1. 2913716Domain d3seta1: 3set A:2-359 [216368]
        Other proteins in same PDB: d3seta2, d3setc2
        automated match to d1a7lc_
        complexed with ni
        has additional insertions and/or extensions that are not grouped together
      2. 2913717Domain d3setc1: 3set C:3-359 [216369]
        Other proteins in same PDB: d3seta2, d3setc2
        automated match to d1a7lc_
        complexed with ni
        has additional insertions and/or extensions that are not grouped together
    58. Domain for 3seu:
      • 2913709Domain d3seua1: 3seu A:5-359 [216370]
        Other proteins in same PDB: d3seua2
        automated match to d1a7lc_
        complexed with act, gol, zn
        has additional insertions and/or extensions that are not grouped together
    59. Domains for 3sev:
      1. 2913758Domain d3seva1: 3sev A:2-359 [249417]
        Other proteins in same PDB: d3seva2, d3sevc2, d3seve2
        automated match to d3pgfa_
        complexed with cl, zn
        has additional insertions and/or extensions that are not grouped together
      2. 2913759Domain d3sevc1: 3sev C:2-359 [249418]
        Other proteins in same PDB: d3seva2, d3sevc2, d3seve2
        automated match to d3pgfa_
        complexed with cl, zn
        has additional insertions and/or extensions that are not grouped together
      3. 2913760Domain d3seve1: 3sev E:2-359 [249419]
        Other proteins in same PDB: d3seva2, d3sevc2, d3seve2
        automated match to d3pgfa_
        complexed with cl, zn
        has additional insertions and/or extensions that are not grouped together
    60. Domain for 3sew:
      • 2913698Domain d3sewa1: 3sew A:1-359 [216371]
        Other proteins in same PDB: d3sewa2
        automated match to d1a7lc_
        complexed with cl, gol, zn
        has additional insertions and/or extensions that are not grouped together
    61. Domains for 3sex:
      1. 2913723Domain d3sexa1: 3sex A:2-359 [216372]
        Other proteins in same PDB: d3sexa2, d3sexc2
        automated match to d1a7lc_
        complexed with iod, ni
        has additional insertions and/or extensions that are not grouped together
      2. 2913724Domain d3sexc1: 3sex C:2-359 [216373]
        Other proteins in same PDB: d3sexa2, d3sexc2
        automated match to d1a7lc_
        complexed with iod, ni
        has additional insertions and/or extensions that are not grouped together
    62. Domains for 3sey:
      1. 2913706Domain d3seya1: 3sey A:1-359 [216374]
        Other proteins in same PDB: d3seya2, d3seyc2, d3seye2
        automated match to d1a7lc_
        complexed with act, gol, zn
        has additional insertions and/or extensions that are not grouped together
      2. 2913707Domain d3seyc1: 3sey C:1-359 [216375]
        Other proteins in same PDB: d3seya2, d3seyc2, d3seye2
        automated match to d1a7lc_
        complexed with act, gol, zn
        has additional insertions and/or extensions that are not grouped together
      3. 2913708Domain d3seye1: 3sey E:1-359 [216376]
        Other proteins in same PDB: d3seya2, d3seyc2, d3seye2
        automated match to d1a7lc_
        complexed with act, gol, zn
        has additional insertions and/or extensions that are not grouped together
    63. Domain for 4jkm:
    64. Domain for 4mbp:
      • 2913703Domain d4mbpa_: 4mbp A: [35777]
        has additional insertions and/or extensions that are not grouped together
    65. Domains for 5bk2:
      1. 2913744Domain d5bk2a1: 5bk2 A:1-366 [346610]
        Other proteins in same PDB: d5bk2a2, d5bk2b2, d5bk2c_, d5bk2d1, d5bk2d2, d5bk2h_, d5bk2l1, d5bk2l2
        automated match to d1jvya_
        complexed with cl, gol, po4
        has additional insertions and/or extensions that are not grouped together
      2. 2913745Domain d5bk2b1: 5bk2 B:1-366 [346728]
        Other proteins in same PDB: d5bk2a2, d5bk2b2, d5bk2c_, d5bk2d1, d5bk2d2, d5bk2h_, d5bk2l1, d5bk2l2
        automated match to d1jvya_
        complexed with cl, gol, po4
        has additional insertions and/or extensions that are not grouped together
    66. Domain for 5cbn:
      • 2913752Domain d5cbnb_: 5cbn B: [312729]
        automated match to d1jvya_
        complexed with eyc
        has additional insertions and/or extensions that are not grouped together
    67. Domain for 5gru:
    68. Domain for 5i69:
      • 2913748Domain d5i69a_: 5i69 A: [315084]
        automated match to d3q28a_
        complexed with so4; mutant
        has additional insertions and/or extensions that are not grouped together
    69. Domain for 6cxs:
  4. 2913786Pyrococcus furiosus [TaxId:2261] [53864] (1 PDB entry)
    • Domain for 1elj:
      • 2913787Domain d1elja_: 1elj A: [35791]
        complexed with so4
        has additional insertions and/or extensions that are not grouped together
  5. 2913788Thermococcus litoralis [TaxId:2265] [64191] (1 PDB entry)
    trehalose maltose-binding protein
    • Domain for 1eu8:
      • 2913789Domain d1eu8a_: 1eu8 A: [59502]
        complexed with cl, pt
        has additional insertions and/or extensions that are not grouped together

More info for Protein D-maltodextrin-binding protein, MBP from c.94.1.1: Phosphate binding protein-like

Timeline for Protein D-maltodextrin-binding protein, MBP from c.94.1.1: Phosphate binding protein-like: