Lineage for Protein: Ran

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2110099Family c.37.1.8: G proteins [52592] (79 protein domains)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 2110833Protein Ran [52609] (2 species)

Species:

  1. 2110834Dog (Canis familiaris) [TaxId:9615] [52610] (20 PDB entries)
    Uniprot P62825
    1. Domains for 1a2k:
      1. 2110845Domain d1a2kc_: 1a2k C: [32037]
        Other proteins in same PDB: d1a2ka_, d1a2kb_
        complexed with gdp, mg, so4
      2. 2110846Domain d1a2kd_: 1a2k D: [32038]
        Other proteins in same PDB: d1a2ka_, d1a2kb_
        complexed with gdp, mg, so4
      3. 2110847Domain d1a2ke_: 1a2k E: [32039]
        Other proteins in same PDB: d1a2ka_, d1a2kb_
        complexed with gdp, mg, so4
    2. Domains for 1byu:
      1. 2110835Domain d1byua_: 1byu A: [32032]
        complexed with gdp, mg
      2. 2110836Domain d1byub_: 1byu B: [32033]
        complexed with gdp, mg
    3. Domain for 1qg2:
    4. Domains for 1qg4:
      1. 2110843Domain d1qg4a_: 1qg4 A: [32035]
        complexed with gdp, mg; mutant
      2. 2110844Domain d1qg4b_: 1qg4 B: [32036]
        complexed with gdp, mg; mutant
    5. Domain for 1wa5:
    6. Domains for 3a6p:
      1. 2110851Domain d3a6pc_: 3a6p C: [171827]
        automated match to d1byub_
        protein/RNA complex; complexed with gtp, mg
      2. 2110852Domain d3a6ph_: 3a6p H: [171828]
        automated match to d1byub_
        protein/RNA complex; complexed with gtp, mg
    7. Domains for 3ran:
      1. 2110838Domain d3rana_: 3ran A: [32028]
        complexed with gdp, mg; mutant
      2. 2110839Domain d3ranb_: 3ran B: [32029]
        complexed with gdp, mg; mutant
      3. 2110840Domain d3ranc_: 3ran C: [32030]
        complexed with gdp, mg; mutant
      4. 2110841Domain d3rand_: 3ran D: [32031]
        complexed with gdp, mg; mutant
    8. Domain for 3w3z:
    9. Domains for 5bxq:
      1. 2110848Domain d5bxqc_: 5bxq C: [274453]
        Other proteins in same PDB: d5bxqa_, d5bxqb_
        automated match to d1a2kd_
        complexed with gdp, mg, so4
      2. 2110849Domain d5bxqd_: 5bxq D: [274452]
        Other proteins in same PDB: d5bxqa_, d5bxqb_
        automated match to d1a2ke_
        complexed with gdp, mg, so4
      3. 2110850Domain d5bxqe_: 5bxq E: [274454]
        Other proteins in same PDB: d5bxqa_, d5bxqb_
        automated match to d1a2ke_
        complexed with gdp, mg, so4
    10. Domain for 5jlj:
    11. Domain for 5uwh:
    12. Domain for 5uwi:
    13. Domain for 5uwo:
    14. Domain for 5uwp:
    15. Domain for 5uwq:
    16. Domain for 5uwr:
    17. Domain for 5uws:
    18. Domain for 5uwt:
    19. Domain for 5uwu:
    20. Domain for 5uww:
  2. 2110854Human (Homo sapiens) [TaxId:9606] [52611] (43 PDB entries)
    1. Domains for 1i2m:
      1. 2110860Domain d1i2ma_: 1i2m A: [61568]
        Other proteins in same PDB: d1i2mb_, d1i2md_
        complexed to RCC1
        complexed with so4
      2. 2110861Domain d1i2mc_: 1i2m C: [61570]
        Other proteins in same PDB: d1i2mb_, d1i2md_
        complexed to RCC1
        complexed with so4
    2. Domains for 1ibr:
      1. 2110896Domain d1ibra_: 1ibr A: [32040]
        Other proteins in same PDB: d1ibrb_, d1ibrd_
        complexed with gnp, mg
      2. 2110897Domain d1ibrc_: 1ibr C: [32041]
        Other proteins in same PDB: d1ibrb_, d1ibrd_
        complexed with gnp, mg
    3. Domains for 1k5d:
      1. 2110905Domain d1k5da_: 1k5d A: [68168]
        Other proteins in same PDB: d1k5db_, d1k5dc_, d1k5de_, d1k5df_, d1k5dh_, d1k5di_, d1k5dk_, d1k5dl_
        complexed with gnp, mg
      2. 2110906Domain d1k5dd_: 1k5d D: [68171]
        Other proteins in same PDB: d1k5db_, d1k5dc_, d1k5de_, d1k5df_, d1k5dh_, d1k5di_, d1k5dk_, d1k5dl_
        complexed with gnp, mg
      3. 2110907Domain d1k5dg_: 1k5d G: [68174]
        Other proteins in same PDB: d1k5db_, d1k5dc_, d1k5de_, d1k5df_, d1k5dh_, d1k5di_, d1k5dk_, d1k5dl_
        complexed with gnp, mg
      4. 2110908Domain d1k5dj_: 1k5d J: [68177]
        Other proteins in same PDB: d1k5db_, d1k5dc_, d1k5de_, d1k5df_, d1k5dh_, d1k5di_, d1k5dk_, d1k5dl_
        complexed with gnp, mg
    4. Domains for 1k5g:
      1. 2110917Domain d1k5ga_: 1k5g A: [68180]
        Other proteins in same PDB: d1k5gb_, d1k5gc_, d1k5ge_, d1k5gf_, d1k5gh_, d1k5gi_, d1k5gk_, d1k5gl_
        complexed with af3, gdp, mg
      2. 2110918Domain d1k5gd_: 1k5g D: [68183]
        Other proteins in same PDB: d1k5gb_, d1k5gc_, d1k5ge_, d1k5gf_, d1k5gh_, d1k5gi_, d1k5gk_, d1k5gl_
        complexed with af3, gdp, mg
      3. 2110919Domain d1k5gg_: 1k5g G: [68186]
        Other proteins in same PDB: d1k5gb_, d1k5gc_, d1k5ge_, d1k5gf_, d1k5gh_, d1k5gi_, d1k5gk_, d1k5gl_
        complexed with af3, gdp, mg
      4. 2110920Domain d1k5gj_: 1k5g J: [68189]
        Other proteins in same PDB: d1k5gb_, d1k5gc_, d1k5ge_, d1k5gf_, d1k5gh_, d1k5gi_, d1k5gk_, d1k5gl_
        complexed with af3, gdp, mg
    5. Domain for 1qbk:
    6. Domains for 1rrp:
      1. 2110915Domain d1rrpa_: 1rrp A: [32042]
        Other proteins in same PDB: d1rrpb_, d1rrpd_
        complexed with gnp, mg
      2. 2110916Domain d1rrpc_: 1rrp C: [32043]
        Other proteins in same PDB: d1rrpb_, d1rrpd_
        complexed with gnp, mg
    7. Domain for 2mmc:
    8. Domain for 2mmg:
    9. Domain for 3ch5:
    10. Domains for 3ea5:
      1. 2110894Domain d3ea5a_: 3ea5 A: [161657]
        Other proteins in same PDB: d3ea5b_, d3ea5d_
        automated match to d1byub_
        complexed with gdp, mg
      2. 2110895Domain d3ea5c_: 3ea5 C: [161658]
        Other proteins in same PDB: d3ea5b_, d3ea5d_
        automated match to d1byub_
        complexed with gdp, mg
    11. Domain for 3gj3:
      • 2110857Domain d3gj3a_: 3gj3 A: [176685]
        Other proteins in same PDB: d3gj3b_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    12. Domains for 3gj4:
      1. 2110877Domain d3gj4a_: 3gj4 A: [176687]
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
      2. 2110878Domain d3gj4c_: 3gj4 C: [176688]
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    13. Domains for 3gj5:
      1. 2110864Domain d3gj5a_: 3gj5 A: [176689]
        Other proteins in same PDB: d3gj5b_, d3gj5d_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
      2. 2110865Domain d3gj5c_: 3gj5 C: [176691]
        Other proteins in same PDB: d3gj5b_, d3gj5d_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    14. Domain for 3gj6:
      • 2110899Domain d3gj6a_: 3gj6 A: [176693]
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    15. Domains for 3gj7:
      1. 2110869Domain d3gj7a_: 3gj7 A: [176694]
        Other proteins in same PDB: d3gj7b_, d3gj7d_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
      2. 2110870Domain d3gj7c_: 3gj7 C: [176695]
        Other proteins in same PDB: d3gj7b_, d3gj7d_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    16. Domains for 3gj8:
      1. 2110858Domain d3gj8a_: 3gj8 A: [176696]
        Other proteins in same PDB: d3gj8b_, d3gj8d_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
      2. 2110859Domain d3gj8c_: 3gj8 C: [176697]
        Other proteins in same PDB: d3gj8b_, d3gj8d_
        automated match to d1byub_
        protein/DNA complex; protein/RNA complex; complexed with gdp, mg, zn
    17. Domains for 3gjx:
      1. 2110900Domain d3gjxc_: 3gjx C: [176713]
        automated match to d1byub_
        protein/RNA complex; complexed with cl, gtp, mg, na
      2. 2110901Domain d3gjxf_: 3gjx F: [176714]
        automated match to d1byub_
        protein/RNA complex; complexed with cl, gtp, mg, na
    18. Domain for 4gmx:
    19. Domain for 4gpt:
    20. Domain for 4hat:
    21. Domain for 4hau:
    22. Domain for 4hav:
    23. Domain for 4haw:
    24. Domain for 4hax:
    25. Domain for 4hay:
    26. Domain for 4haz:
    27. Domain for 4hb0:
    28. Domain for 4hb2:
    29. Domain for 4hb3:
    30. Domain for 4hb4:
    31. Domain for 4ol0:
    32. Domain for 4wvf:
    33. Domains for 5ciq:
      1. 2110873Domain d5ciqa_: 5ciq A: [276667]
        automated match to d1a2ke_
        complexed with gdp, mg
      2. 2110874Domain d5ciqb_: 5ciq B: [276664]
        automated match to d1a2ke_
        complexed with gdp, mg
    34. Domains for 5cit:
      1. 2110892Domain d5cita_: 5cit A: [276665]
        automated match to d1a2kd_
        complexed with gdp, mg
      2. 2110893Domain d5citb_: 5cit B: [276668]
        automated match to d1a2kd_
        complexed with gdp, mg
    35. Domains for 5ciw:
      1. 2110881Domain d5ciwa_: 5ciw A: [276658]
        automated match to d2mmca_
        complexed with gdp, mg; mutant
      2. 2110882Domain d5ciwb_: 5ciw B: [276662]
        automated match to d2mmca_
        complexed with gdp, mg; mutant
    36. Domains for 5cj2:
      1. 2110883Domain d5cj2a_: 5cj2 A: [276659]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      2. 2110884Domain d5cj2b_: 5cj2 B: [276666]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      3. 2110885Domain d5cj2c_: 5cj2 C: [276660]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      4. 2110886Domain d5cj2d_: 5cj2 D: [276657]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      5. 2110887Domain d5cj2e_: 5cj2 E: [276661]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      6. 2110888Domain d5cj2f_: 5cj2 F: [276663]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      7. 2110889Domain d5cj2g_: 5cj2 G: [276670]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
      8. 2110890Domain d5cj2h_: 5cj2 H: [276669]
        automated match to d2mmca_
        complexed with gdp, mg, po4; mutant
    37. Domains for 5cll:
      1. 2110910Domain d5clla_: 5cll A: [276681]
        Other proteins in same PDB: d5cllb_, d5clld_
        automated match to d1qbkc_
        complexed with bef, gdp, mg
      2. 2110911Domain d5cllc_: 5cll C: [276682]
        Other proteins in same PDB: d5cllb_, d5clld_
        automated match to d1qbkc_
        complexed with bef, gdp, mg
    38. Domain for 5dh9:
    39. Domain for 5dha:
    40. Domain for 5dhf:
    41. Domain for 5di9:
    42. Domain for 5dif:
    43. Domain for 5dis:

More info for Protein Ran from c.37.1.8: G proteins

Timeline for Protein Ran from c.37.1.8: G proteins: