PDB entry 7dbg

View 7dbg on RCSB PDB site
Description: Yeast CRM1e (apo) in complex with Ran-RanBP1
Class: transport protein
Keywords: Complex, TRANSPORT PROTEIN
Deposited on 2020-10-20, released 2021-09-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-09-29, with a file datestamp of 2021-09-24.
Experiment type: XRAY
Resolution: 2.06 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GTP-binding nuclear protein ran
    Species: Homo sapiens [TaxId:9606]
    Gene: RAN, ARA24, OK/SW-cl.81
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62826 (0-215)
      • conflict (7)
      • engineered mutation (68)
      • engineered mutation (181)
    Domains in SCOPe 2.08: d7dbga_
  • Chain 'B':
    Compound: YRB1 isoform 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: YRB1, GI526_G0000915
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dbgb_
  • Chain 'C':
    Compound: CRM1 isoform 1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: CRM1, GI526_G0002640, PACBIOSEQ_LOCUS2878, PACBIOSEQ_LOCUS3002
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A6A5PZI8 (3-1002)
      • expression tag (0-2)
      • engineered mutation (29)
      • engineered mutation (51)
      • engineered mutation (53)
      • engineered mutation (481)
      • engineered mutation (483-485)
      • engineered mutation (497)
      • engineered mutation (505)
      • engineered mutation (685)
      • engineered mutation (966)
  • Heterogens: MG, GOL, GTP, CL, DMS, MPO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7dbgA (A:)
maaqgepevqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
fnvwdtaglekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
aaappevvmdpalaaqyehdlevaqttalpdedddl

    Sequence, based on observed residues (ATOM records): (download) 
    >7dbgA (A:)
evqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdta
glekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
drkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvampaaappev
vmdpalaaqyehdlevaqttalpdedddl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7dbgB (B:)
dihfepvvhlekvdvktmeedeevlykvraklfrfdadakewkergtgdckflknkktnk
vrilmrrdktlkicanhiiapeytlkpnvgsdrswvyactadiaegeaeaftfairfgsk
enadkfkeefekaqeinkka

    Sequence, based on observed residues (ATOM records): (download) 
    >7dbgB (B:)
deevlykvraklfrfdadakewkergtgdckflknkktnkvrilmrrdktlkicanhiia
peytlkpnvgsdrswvyactadiaegeaeaftfairfgskenadkfkeefekaqeinkk

  • Chain 'C':
    No sequence available.