PDB entry 1qbk

View 1qbk on RCSB PDB site
Description: structure of the karyopherin beta2-ran gppnhp nuclear transport complex
Class: nuclear transport protein complex
Keywords: heat repeats, nuclear transport protein complex
Deposited on 1999-04-23, released 1999-06-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-31, with a file datestamp of 2018-01-26.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: karyopherin beta2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92973 (Start-889)
      • conflict (216)
      • modified residue (174)
      • modified residue (209)
      • modified residue (236)
      • modified residue (246)
      • modified residue (253)
      • modified residue (260)
      • modified residue (307)
      • modified residue (428)
      • modified residue (431)
      • modified residue (481)
      • modified residue (563)
      • modified residue (565)
      • modified residue (574)
      • modified residue (623)
      • modified residue (640)
      • modified residue (671)
      • modified residue (679)
      • modified residue (709)
      • modified residue (738)
      • modified residue (742)
      • modified residue (748)
      • modified residue (788)
      • modified residue (819)
      • modified residue (851)
    Domains in SCOPe 2.08: d1qbkb_
  • Chain 'C':
    Compound: ran
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62826
      • conflict (128)
      • modified residue (88)
      • modified residue (178)
      • modified residue (188)
    Domains in SCOPe 2.08: d1qbkc_
  • Heterogens: MG, GNP

PDB Chain Sequences:

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1qbkB (B:)
meyewkpdeqglqqilqllkesqspdttiqrtvqqkleqlnqypdfnnylifvltklkse
deptrslsglilknnvkahfqnfpngvtdfikseclnnigdsspliratvgilittiask
gelqnwpdllpklcslldsedyntcegafgalqkicedsaeildsdvldrplnimipkfl
qffkhsspkirshavacvnqfiisrtqalmlhidsftenlfalagdeepevrknvcralv
mllevrmdrllphmhniveymlqrtqdqdenvaleacefwltlaeqpickdvlvrhlpkl
ipvlvngmkysdidiillkgdveedetipdseqdirprfhrsrtvaqqhdedgieeeddd
ddeiddddtisdwnlrkcsaaaldvlanvyrdellphilpllkellfhhewvvkesgilv
lgaiaegcmqgmipylpeliphliqclsdkkalvrsitcwtlsryahwvvsqppdtylkp
lmtellkrildsnkrvqeaacsafatleeeactelvpylayildtlvfafskyqhknlli
lydaigtladsvghhlnkpeyiqmlmppliqkwnmlkdedkdlfplleclssvatalqsg
flpycepvyqrcvnlvqktlaqamlnnaqpdqyeapdkdfmivaldllsglaeglggnie
qlvarsniltlmyqcmqdkmpevrqssfallgdltkacfqhvkpciadfmpilgtnlnpe
fisvcnnatwaigeisiqmgiemqpyipmvlhqlveiinrpntpktllentaitigrlgy
vcpqevapmlqqfirpwctslrnirdneekdsafrgictmisvnpsgviqdfiffcdava
swinpkddlrdmfckilhgfknqvgdenwrrfsdqfplplkerlaafygv

    Sequence, based on observed residues (ATOM records): (download) 
    >1qbkB (B:)
yewkpdeqglqqilqllkesqspdttiqrtvqqkleqlnqypdfnnylifvltklksede
ptrslsglilknnvkahfqnfpngvtdfikseclnnigdsspliratvgilittiaskge
lqnwpdllpklcslldsedyntcegafgalqkicedsaeildsdrplnimipkflqffkh
sspkirshavacvnqfiisrtqalmlhidsftenlfalagdeepevrknvcralvmllev
rmdrllphmhniveymlqrtqdqdenvaleacefwltlaeqpickdvlvrhlpklipvlv
ngmkysdidiillkgdveedetipdseqdirprfhrsrtvaqqhdeddddddeiddddti
sdwnlrkcsaaaldvlanvyrdellphilpllkellfhhewvvkesgilvlgaiaegcmq
gmipylpeliphliqclsdkkalvrsitcwtlsryahwvvsqppdtylkplmtellkril
dsnkrvqeaacsafatleeeactelvpylayildtlvfafskyqhknllilydaigtlad
svghhlnkpeyiqmlmppliqkwnmlkdedkdlfplleclssvatalqsgflpycepvyq
rcvnlvqktlaqamlnnaqpdqyeapdkdfmivaldllsglaeglggnieqlvarsnilt
lmyqcmqdkmpevrqssfallgdltkacfqhvkpciadfmpilgtnlnpefisvcnnatw
aigeisiqmgiemqpyipmvlhqlveiinrpntpktllentaitigrlgyvcpqevapml
qqfirpwctslrnirdneekdsafrgictmisvnpsgviqdfiffcdavaswinpkddlr
dmfckilhgfknqvgdenwrrfsdqfplplkerlaafygv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1qbkC (C:)
maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
alappevvmdpalaaqyehdlevaqttalpdedddl

    Sequence, based on observed residues (ATOM records): (download) 
    >1qbkC (C:)
qvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdta
gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
drkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvampalappev
vmdpalaaqy