Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2311272Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 2311322Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 2311323Family a.24.3.1: Cytochrome b562 [47176] (2 protein domains)
    automatically mapped to Pfam PF07361
  6. 2311324Protein Cytochrome b562 [47177] (1 species)
  7. 2311325Species Escherichia coli [TaxId:562] [47178] (42 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1apc:
  2. Domain(s) for 1lm3:
    1. 2311426Domain d1lm3b_: 1lm3 B: [74027]
      complexed with hem, mg
    2. 2311427Domain d1lm3d_: 1lm3 D: [74028]
      complexed with hem, mg
  3. Domain(s) for 1m6t:
    • 2311340Domain d1m6ta_: 1m6t A: [78705]
      b562ril, a redesigned four helix bundle
      complexed with so4
  4. Domain(s) for 1qpu:
  5. Domain(s) for 1qq3:
  6. Domain(s) for 256b:
    1. 2311338Domain d256ba_: 256b A: [16539]
      complexed with hem, so4
    2. 2311339Domain d256bb_: 256b B: [16540]
      complexed with hem, so4
  7. Domain(s) for 2qla:
    1. 2311446Domain d2qlaa_: 2qla A: [167702]
      automated match to d1qq3a_
      complexed with hem, zn
    2. 2311447Domain d2qlab_: 2qla B: [167703]
      automated match to d1qq3a_
      complexed with hem, zn
    3. 2311448Domain d2qlac_: 2qla C: [167704]
      automated match to d1qq3a_
      complexed with hem, zn
    4. 2311449Domain d2qlad_: 2qla D: [167705]
      automated match to d1qq3a_
      complexed with hem, zn
  8. Domain(s) for 3c62:
    1. 2311350Domain d3c62a_: 3c62 A: [173052]
      automated match to d1qq3a_
      complexed with ca, hem, zn
    2. 2311351Domain d3c62b_: 3c62 B: [173053]
      automated match to d1qq3a_
      complexed with ca, hem, zn
    3. 2311352Domain d3c62c_: 3c62 C: [173054]
      automated match to d1qq3a_
      complexed with ca, hem, zn
    4. 2311353Domain d3c62d_: 3c62 D: [173055]
      automated match to d1qq3a_
      complexed with ca, hem, zn
  9. Domain(s) for 3c63:
    1. 2311334Domain d3c63a_: 3c63 A: [173056]
      automated match to d1qq3a_
      complexed with ca, hem, zn
    2. 2311335Domain d3c63b_: 3c63 B: [173057]
      automated match to d1qq3a_
      complexed with ca, hem, zn
    3. 2311336Domain d3c63c_: 3c63 C: [173058]
      automated match to d1qq3a_
      complexed with ca, hem, zn
    4. 2311337Domain d3c63d_: 3c63 D: [173059]
      automated match to d1qq3a_
      complexed with ca, hem, zn
  10. Domain(s) for 3de8:
    1. 2311330Domain d3de8a_: 3de8 A: [173861]
      automated match to d1qq3a_
      complexed with ca, cu, hem
    2. 2311331Domain d3de8b_: 3de8 B: [173862]
      automated match to d1qq3a_
      complexed with ca, cu, hem
    3. 2311332Domain d3de8c_: 3de8 C: [173863]
      automated match to d1qq3a_
      complexed with ca, cu, hem
    4. 2311333Domain d3de8d_: 3de8 D: [173864]
      automated match to d1qq3a_
      complexed with ca, cu, hem
  11. Domain(s) for 3de9:
  12. Domain(s) for 3foo:
    1. 2311399Domain d3fooa_: 3foo A: [175935]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    2. 2311400Domain d3foob_: 3foo B: [175936]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    3. 2311401Domain d3fooc_: 3foo C: [175937]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    4. 2311402Domain d3food_: 3foo D: [175938]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    5. 2311403Domain d3fooe_: 3foo E: [175939]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    6. 2311404Domain d3foof_: 3foo F: [175940]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    7. 2311405Domain d3foog_: 3foo G: [175941]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    8. 2311406Domain d3fooh_: 3foo H: [175942]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    9. 2311407Domain d3fooi_: 3foo I: [175943]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    10. 2311408Domain d3fooj_: 3foo J: [175944]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    11. 2311409Domain d3fook_: 3foo K: [175945]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
    12. 2311410Domain d3fool_: 3foo L: [175946]
      automated match to d1qq3a_
      complexed with hem, ni, pxx
  13. Domain(s) for 3fop:
    1. 2311432Domain d3fopa_: 3fop A: [246177]
      automated match to d3fooa_
      complexed with hem, ni, pxx
    2. 2311433Domain d3fopb_: 3fop B: [246178]
      automated match to d3fooa_
      complexed with hem, ni, pxx
  14. Domain(s) for 3hni:
    1. 2311387Domain d3hnia_: 3hni A: [177706]
      automated match to d1qq3a_
      complexed with hem, zn
    2. 2311388Domain d3hnib_: 3hni B: [177707]
      automated match to d1qq3a_
      complexed with hem, zn
    3. 2311389Domain d3hnic_: 3hni C: [177708]
      automated match to d1qq3a_
      complexed with hem, zn
    4. 2311390Domain d3hnid_: 3hni D: [177709]
      automated match to d1qq3a_
      complexed with hem, zn
    5. 2311391Domain d3hnie_: 3hni E: [177710]
      automated match to d1qq3a_
      complexed with hem, zn
    6. 2311392Domain d3hnif_: 3hni F: [177711]
      automated match to d1qq3a_
      complexed with hem, zn
    7. 2311393Domain d3hnig_: 3hni G: [177712]
      automated match to d1qq3a_
      complexed with hem, zn
    8. 2311394Domain d3hnih_: 3hni H: [177713]
      automated match to d1qq3a_
      complexed with hem, zn
  15. Domain(s) for 3hnj:
    1. 2311370Domain d3hnja_: 3hnj A: [177714]
      automated match to d1qq3a_
      complexed with hem, zn
    2. 2311371Domain d3hnjb_: 3hnj B: [177715]
      automated match to d1qq3a_
      complexed with hem, zn
    3. 2311372Domain d3hnjc_: 3hnj C: [177716]
      automated match to d1qq3a_
      complexed with hem, zn
    4. 2311373Domain d3hnjd_: 3hnj D: [177717]
      automated match to d1qq3a_
      complexed with hem, zn
  16. Domain(s) for 3hnk:
    1. 2311360Domain d3hnka_: 3hnk A: [177718]
      automated match to d1qq3a_
      complexed with hem
    2. 2311361Domain d3hnkb_: 3hnk B: [177719]
      automated match to d1qq3a_
      complexed with hem
  17. Domain(s) for 3hnl:
    1. 2311375Domain d3hnla_: 3hnl A: [177720]
      automated match to d1qq3a_
      complexed with cl, cu, hem
    2. 2311376Domain d3hnlb_: 3hnl B: [177721]
      automated match to d1qq3a_
      complexed with cl, cu, hem
  18. Domain(s) for 3m15:
    1. 2311423Domain d3m15a_: 3m15 A: [180706]
      automated match to d1qq3a_
      complexed with hem, zn
    2. 2311424Domain d3m15b_: 3m15 B: [180707]
      automated match to d1qq3a_
      complexed with hem, zn
    3. 2311425Domain d3m15c_: 3m15 C: [180708]
      automated match to d1qq3a_
      complexed with hem, zn
  19. Domain(s) for 3m4b:
    1. 2311395Domain d3m4ba_: 3m4b A: [180820]
      automated match to d1qq3a_
      complexed with act, hem, zn
    2. 2311396Domain d3m4bb_: 3m4b B: [180821]
      automated match to d1qq3a_
      complexed with act, hem, zn
    3. 2311397Domain d3m4bc_: 3m4b C: [180822]
      automated match to d1qq3a_
      complexed with act, hem, zn
    4. 2311398Domain d3m4bd_: 3m4b D: [180823]
      automated match to d1qq3a_
      complexed with act, hem, zn
  20. Domain(s) for 3m4c:
    1. 2311341Domain d3m4ca_: 3m4c A: [180824]
      automated match to d1qq3a_
      complexed with act, hem, zn
    2. 2311342Domain d3m4cb_: 3m4c B: [180825]
      automated match to d1qq3a_
      complexed with act, hem, zn
    3. 2311343Domain d3m4cc_: 3m4c C: [180826]
      automated match to d1qq3a_
      complexed with act, hem, zn
    4. 2311344Domain d3m4cd_: 3m4c D: [180827]
      automated match to d1qq3a_
      complexed with act, hem, zn
  21. Domain(s) for 3m79:
    1. 2311362Domain d3m79a_: 3m79 A: [180901]
      automated match to d1qq3a_
      complexed with hem, zn
    2. 2311363Domain d3m79b_: 3m79 B: [180902]
      automated match to d1qq3a_
      complexed with hem, zn
    3. 2311364Domain d3m79c_: 3m79 C: [180903]
      automated match to d1qq3a_
      complexed with hem, zn
    4. 2311365Domain d3m79d_: 3m79 D: [180904]
      automated match to d1qq3a_
      complexed with hem, zn
    5. 2311366Domain d3m79e_: 3m79 E: [180905]
      automated match to d1qq3a_
      complexed with hem, zn
    6. 2311367Domain d3m79f_: 3m79 F: [180906]
      automated match to d1qq3a_
      complexed with hem, zn
    7. 2311368Domain d3m79g_: 3m79 G: [180907]
      automated match to d1qq3a_
      complexed with hem, zn
    8. 2311369Domain d3m79h_: 3m79 H: [180908]
      automated match to d1qq3a_
      complexed with hem, zn
  22. Domain(s) for 3nmi:
    1. 2311354Domain d3nmia_: 3nmi A: [182397]
      automated match to d1qq3a_
      complexed with act, hem, pxx
    2. 2311355Domain d3nmib_: 3nmi B: [182398]
      automated match to d1qq3a_
      complexed with act, hem, pxx
    3. 2311356Domain d3nmic_: 3nmi C: [182399]
      automated match to d1qq3a_
      complexed with act, hem, pxx
    4. 2311357Domain d3nmid_: 3nmi D: [182400]
      automated match to d1qq3a_
      complexed with act, hem, pxx
    5. 2311358Domain d3nmie_: 3nmi E: [182401]
      automated match to d1qq3a_
      complexed with act, hem, pxx
    6. 2311359Domain d3nmif_: 3nmi F: [182402]
      automated match to d1qq3a_
      complexed with act, hem, pxx
  23. Domain(s) for 3nmj:
    1. 2311436Domain d3nmja_: 3nmj A: [247960]
      automated match to d3nmia_
      complexed with hem, ni, pxx
    2. 2311437Domain d3nmjb_: 3nmj B: [247961]
      automated match to d3nmia_
      complexed with hem, ni, pxx
    3. 2311438Domain d3nmjc_: 3nmj C: [247962]
      automated match to d3nmia_
      complexed with hem, ni, pxx
    4. 2311439Domain d3nmjd_: 3nmj D: [247963]
      automated match to d3nmia_
      complexed with hem, ni, pxx
  24. Domain(s) for 3nmk:
    1. 2311419Domain d3nmka_: 3nmk A: [182403]
      automated match to d1qq3a_
      complexed with hem, pxx, zn
    2. 2311420Domain d3nmkb_: 3nmk B: [182404]
      automated match to d1qq3a_
      complexed with hem, pxx, zn
    3. 2311421Domain d3nmkc_: 3nmk C: [182405]
      automated match to d1qq3a_
      complexed with hem, pxx, zn
    4. 2311422Domain d3nmkd_: 3nmk D: [182406]
      automated match to d1qq3a_
      complexed with hem, pxx, zn
  25. Domain(s) for 3tol:
    1. 2311345Domain d3tola_: 3tol A: [200853]
      automated match to d3tolc_
      complexed with ca, hem, zn
    2. 2311346Domain d3tolb_: 3tol B: [194998]
      automated match to d3de8a_
      complexed with ca, hem, zn
    3. 2311347Domain d3tolc_: 3tol C: [194997]
      automated match to d3de8a_
      complexed with ca, hem, zn
    4. 2311348Domain d3told_: 3tol D: [200854]
      automated match to d3tolc_
      complexed with ca, hem, zn
  26. Domain(s) for 3tom:
    1. 2311379Domain d3toma_: 3tom A: [216916]
      automated match to d3tolc_
      complexed with hem, zn
    2. 2311380Domain d3tomb_: 3tom B: [216917]
      automated match to d3tolc_
      complexed with hem, zn
    3. 2311381Domain d3tomc_: 3tom C: [216918]
      automated match to d3tolc_
      complexed with hem, zn
    4. 2311382Domain d3tomd_: 3tom D: [216919]
      automated match to d3tolc_
      complexed with hem, zn
  27. Domain(s) for 4je9:
    1. 2311377Domain d4je9a_: 4je9 A: [223766]
      automated match to d3m79a_
      complexed with hem
    2. 2311378Domain d4je9b_: 4je9 B: [223767]
      automated match to d3m79a_
      complexed with hem
  28. Domain(s) for 4jea:
    1. 2311326Domain d4jeaa_: 4jea A: [223768]
      automated match to d3m79a_
      complexed with hem, so4, zn
    2. 2311327Domain d4jeab_: 4jea B: [223769]
      automated match to d3m79a_
      complexed with hem, so4, zn
    3. 2311328Domain d4jeac_: 4jea C: [223770]
      automated match to d3m79a_
      complexed with hem, so4, zn
    4. 2311329Domain d4jead_: 4jea D: [223771]
      automated match to d3m79a_
      complexed with hem, so4, zn
  29. Domain(s) for 4jeb:
    1. 2311385Domain d4jeba_: 4jeb A: [223772]
      automated match to d3m15a_
      complexed with hem, zn
    2. 2311386Domain d4jebb_: 4jeb B: [223773]
      automated match to d3m15a_
      complexed with hem, zn
  30. Domain(s) for 4u9d:
    1. 2311440Domain d4u9da_: 4u9d A: [268927]
      automated match to d3m79a_
      complexed with hem, zn
    2. 2311441Domain d4u9db_: 4u9d B: [268933]
      automated match to d3m79a_
      complexed with hem, zn
    3. 2311442Domain d4u9dc_: 4u9d C: [268932]
      automated match to d3m79a_
      complexed with hem, zn
    4. 2311443Domain d4u9dd_: 4u9d D: [268930]
      automated match to d3m79a_
      complexed with hem, zn
  31. Domain(s) for 4u9e:
  32. Domain(s) for 5awi:
    1. 2311383Domain d5awia_: 5awi A: [278307]
      automated match to d2bc5a_
      complexed with hem, so4, zn
    2. 2311384Domain d5awib_: 5awi B: [278308]
      automated match to d2bc5a_
      complexed with hem, so4, zn
  33. Domain(s) for 5bu7:
    1. 2311434Domain d5bu7a_: 5bu7 A: [318067]
      automated match to d3tola_
      complexed with hem, zn
    2. 2311435Domain d5bu7b_: 5bu7 B: [318119]
      automated match to d3tola_
      complexed with hem, zn
  34. Domain(s) for 5l31:
    1. 2311428Domain d5l31a_: 5l31 A: [325123]
      automated match to d4jeaa_
      complexed with hem, na
    2. 2311429Domain d5l31b_: 5l31 B: [325082]
      automated match to d4jeaa_
      complexed with hem, na
    3. 2311430Domain d5l31c_: 5l31 C: [325102]
      automated match to d4jeaa_
      complexed with hem, na
    4. 2311431Domain d5l31d_: 5l31 D: [324989]
      automated match to d4jeaa_
      complexed with hem, na
  35. Domain(s) for 5l32:
    1. 2311415Domain d5l32a_: 5l32 A: [325143]
      automated match to d4jeaa_
      complexed with hem, p6g, zn
    2. 2311416Domain d5l32b_: 5l32 B: [325107]
      automated match to d4jeaa_
      complexed with hem, p6g, zn
    3. 2311417Domain d5l32c_: 5l32 C: [325090]
      automated match to d4jeaa_
      complexed with hem, p6g, zn
    4. 2311418Domain d5l32d_: 5l32 D: [325078]
      automated match to d4jeaa_
      complexed with hem, p6g, zn
  36. Domain(s) for 5xzi:
  37. Domain(s) for 5xzj:
    1. 2311411Domain d5xzja_: 5xzj A: [343369]
      automated match to d3hnka_
      complexed with cl, hem, zn
    2. 2311412Domain d5xzjb_: 5xzj B: [343356]
      automated match to d3hnka_
      complexed with cl, hem, zn
    3. 2311413Domain d5xzjc_: 5xzj C: [343317]
      automated match to d3hnka_
      complexed with cl, hem, zn
    4. 2311414Domain d5xzjd_: 5xzj D: [343352]
      automated match to d3hnka_
      complexed with cl, hem, zn
  38. Domain(s) for 5ym7:
  39. Domain(s) for 5yo3:
  40. Domain(s) for 5yo4:
  41. Domain(s) for 5yo5:
    1. 3048804Domain d5yo5c1: 5yo5 C:1-106 [348866]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    2. 3048823Domain d5yo5f_: 5yo5 F: [348885]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    3. 3048832Domain d5yo5g_: 5yo5 G: [348894]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    4. 3048858Domain d5yo5e_: 5yo5 E: [348920]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    5. 3048870Domain d5yo5h_: 5yo5 H: [348932]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    6. 3048871Domain d5yo5d_: 5yo5 D: [348933]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    7. 3049030Domain d5yo5a1: 5yo5 A:1-106 [349092]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
    8. 3049402Domain d5yo5b_: 5yo5 B: [349464]
      Other proteins in same PDB: d5yo5a2, d5yo5c2
      automated match to d1m6ta_
  42. Domain(s) for 5yo6:

More info for Species Escherichia coli [TaxId:562] from a.24.3.1 Cytochrome b562

Timeline for Species Escherichia coli [TaxId:562] from a.24.3.1 Cytochrome b562: