SCOPe 2.08: Structural Classification of Proteins

PDB entry 5yo5

View 5yo5 on RCSB PDB site
Description: Crystal Structure of B562RIL with engineered disulfide bond A20C-Q25C
Class: electron transport
Keywords: hemoprotein, fusion partner, helix bundle, ELECTRON TRANSPORT
Deposited on 2017-10-26, released 2018-03-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-07-11, with a file datestamp of 2018-07-06.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - expression tag (0)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5a1, d5yo5a2
Chain 'B':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5b_
Chain 'C':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - expression tag (0)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5c1, d5yo5c2
Chain 'D':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5d_
Chain 'E':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5e_
Chain 'F':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5f_
Chain 'G':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (Start-106)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5g_
Chain 'H':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (1-106)
  - engineered mutation (7)
  - engineered mutation (20)
  - engineered mutation (25)
  - engineered mutation (102)
  - engineered mutation (106)
Domains in SCOPe 2.08: d5yo5h_
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)

>5yo5A (A:)
aadlednwetlndnlkviekcdnaacvkdaltkmraaaldaqkatppkledkspdspemk
dfrhgfdilvgqiddalklanegkvkeaqaaaeqlkttrnayiqkyl

Chain 'B':
Sequence, based on SEQRES records: (download)

>5yo5B (B:)
aadlednwetlndnlkviekcdnaacvkdaltkmraaaldaqkatppkledkspdspemk
dfrhgfdilvgqiddalklanegkvkeaqaaaeqlkttrnayiqkyl