PDB entry 3foo
View 3foo on RCSB PDB site
Description: A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Monoclinic Form
Class: electron transport
Keywords: Four Helix Bundle, Electron transport, Heme, Iron, Metal-binding, Transport
Deposited on
2008-12-30, released
2009-07-14
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.213
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fooa_ - Chain 'B':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3foob_ - Chain 'C':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fooc_ - Chain 'D':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3food_ - Chain 'E':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fooe_ - Chain 'F':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3foof_ - Chain 'G':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3foog_ - Chain 'H':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fooh_ - Chain 'I':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fooi_ - Chain 'J':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fooj_ - Chain 'K':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fook_ - Chain 'L':
Compound: Soluble cytochrome b562
Species: Escherichia coli [TaxId:562]
Gene: cybC
Database cross-references and differences (RAF-indexed):
- Uniprot P0ABE7 (0-105)
- engineered (58)
- engineered (61-62)
- engineered (65)
- engineered (76)
- engineered (97)
- engineered (100)
Domains in SCOPe 2.07: d3fool_ - Heterogens: HEM, PXX, NI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooA (A:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooB (B:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooC (C:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooD (D:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooE (E:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooF (F:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooG (G:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooH (H:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooI (I:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooJ (J:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'K':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooK (K:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>3fooL (L:)
adlednmetlndnlkviekadnaaqvkdaltkmraaaldaqkatppkledkspdspemcd
faagfhilvgqiddalhlanegkvkeaqaaaeqlkttcnachqkyr