Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164133Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 2164134Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 2164135Family d.20.1.1: UBC-related [54496] (7 protein domains)
  6. 2164342Protein automated matches [190124] (12 species)
    not a true protein
  7. 2164354Species Human (Homo sapiens) [TaxId:9606] [186848] (46 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1x23:
    1. 2164361Domain d1x23b2: 1x23 B:1-147 [121616]
      Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
      automated match to d1ur6a_
    2. 2164362Domain d1x23c2: 1x23 C:1-147 [121617]
      Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
      automated match to d1ur6a_
    3. 2164363Domain d1x23d2: 1x23 D:1-147 [121618]
      Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
      automated match to d1ur6a_
  2. Domain(s) for 2c2v:
    1. 2164422Domain d2c2vb_: 2c2v B: [129686]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    2. 2164423Domain d2c2ve_: 2c2v E: [129688]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    3. 2164424Domain d2c2vf_: 2c2v F: [129689]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
    4. 2164425Domain d2c2vh_: 2c2v H: [129690]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    5. 2164426Domain d2c2vi_: 2c2v I: [129691]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
    6. 2164427Domain d2c2vk_: 2c2v K: [129692]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    7. 2164428Domain d2c2vl_: 2c2v L: [129693]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
  3. Domain(s) for 2c4o:
    1. 2164386Domain d2c4oa_: 2c4o A: [303632]
      automated match to d1x23d_
      complexed with gol, so4
    2. 2164387Domain d2c4ob_: 2c4o B: [303633]
      automated match to d1x23d_
      complexed with gol, so4
    3. 2164388Domain d2c4oc_: 2c4o C: [303634]
      automated match to d1x23d_
      complexed with gol, so4
    4. 2164389Domain d2c4od_: 2c4o D: [303635]
      automated match to d1x23d_
      complexed with gol, so4
  4. Domain(s) for 2c4p:
    1. 2164399Domain d2c4pa_: 2c4p A: [163259]
      automated match to d1z2ua1
    2. 2164400Domain d2c4pb_: 2c4p B: [163260]
      automated match to d1z2ua1
  5. Domain(s) for 2clw:
    1. 2164382Domain d2clwa_: 2clw A: [130596]
      automated match to d1ur6a_
      complexed with gol, so4
    2. 2164383Domain d2clwb_: 2clw B: [130597]
      automated match to d1ur6a_
      complexed with gol, so4
    3. 2164384Domain d2clwc_: 2clw C: [130598]
      automated match to d1ur6a_
      complexed with gol, so4
    4. 2164385Domain d2clwd_: 2clw D: [130599]
      automated match to d1ur6a_
      complexed with gol, so4
  6. Domain(s) for 2cyx:
    1. 2164405Domain d2cyxa1: 2cyx A:1-165 [163514]
      Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
      automated match to d2ucza_
    2. 2164406Domain d2cyxb1: 2cyx B:1-165 [163515]
      Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
      automated match to d2ucza_
    3. 2164407Domain d2cyxc1: 2cyx C:1-165 [163516]
      Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
      automated match to d2ucza_
  7. Domain(s) for 2fuh:
  8. Domain(s) for 2kly:
  9. Domain(s) for 2lxp:
  10. Domain(s) for 2qgx:
    1. 2164377Domain d2qgxa_: 2qgx A: [167587]
      automated match to d1zuoa1
    2. 2164378Domain d2qgxb_: 2qgx B: [167588]
      automated match to d1zuoa1
    3. 2164379Domain d2qgxc_: 2qgx C: [167589]
      automated match to d1zuoa1
    4. 2164380Domain d2qgxd_: 2qgx D: [167590]
      automated match to d1zuoa1
  11. Domain(s) for 2yho:
    1. 2164365Domain d2yhob1: 2yho B:1-147 [170787]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
    2. 2164366Domain d2yhod1: 2yho D:1-147 [170788]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
    3. 2164367Domain d2yhof1: 2yho F:1-147 [170789]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
    4. 2164368Domain d2yhoh_: 2yho H: [170790]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
  12. Domain(s) for 3a33:
  13. Domain(s) for 3h8k:
  14. Domain(s) for 3hct:
  15. Domain(s) for 3hcu:
    1. 2164408Domain d3hcub_: 3hcu B: [177395]
      automated match to d1j7db_
      protein/DNA complex; complexed with zn
    2. 2164409Domain d3hcud_: 3hcu D: [177396]
      automated match to d1j7db_
      protein/DNA complex; complexed with zn
  16. Domain(s) for 3l1z:
  17. Domain(s) for 3ptf:
    1. 2164396Domain d3ptfa1: 3ptf A:1-147 [183968]
      Other proteins in same PDB: d3ptfa2, d3ptfb2, d3ptfc_, d3ptfd1, d3ptfd2
      automated match to d1z2ua1
    2. 2164397Domain d3ptfb1: 3ptf B:1-147 [183969]
      Other proteins in same PDB: d3ptfa2, d3ptfb2, d3ptfc_, d3ptfd1, d3ptfd2
      automated match to d1z2ua1
  18. Domain(s) for 3rpg:
  19. Domain(s) for 3tgd:
  20. Domain(s) for 3von:
    1. 2164410Domain d3vonc_: 3von C: [250627]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    2. 2164411Domain d3vone_: 3von E: [250629]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    3. 2164412Domain d3vong_: 3von G: [250631]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    4. 2164413Domain d3vonj_: 3von J: [250634]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    5. 2164414Domain d3vonl_: 3von L: [250636]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    6. 2164415Domain d3vonn_: 3von N: [250638]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    7. 2164416Domain d3vonq_: 3von Q: [250641]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    8. 2164417Domain d3vons_: 3von S: [250643]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    9. 2164418Domain d3vonu_: 3von U: [250645]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    10. 2164419Domain d3vonx_: 3von X: [250648]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    11. 2164420Domain d3vonz_: 3von Z: [250650]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
  21. Domain(s) for 4ap4:
    1. 2164373Domain d4ap4b1: 4ap4 B:1-147 [194914]
      Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
      automated match to d2c4pb_
      complexed with zn
    2. 2164374Domain d4ap4e_: 4ap4 E: [201467]
      Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
      automated match to d4ap4b_
      complexed with zn
  22. Domain(s) for 4auq:
    1. 2164375Domain d4auqa_: 4auq A: [194819]
      Other proteins in same PDB: d4auqc1, d4auqc2, d4auqf_
      automated match to d3a33a_
      complexed with zn
    2. 2164376Domain d4auqd_: 4auq D: [194817]
      Other proteins in same PDB: d4auqc1, d4auqc2, d4auqf_
      automated match to d3a33a_
      complexed with zn
  23. Domain(s) for 4ccg:
    1. 2164401Domain d4ccga1: 4ccg A:1-153 [251362]
      Other proteins in same PDB: d4ccga2, d4ccgb2
      automated match to d1yh2a1
      complexed with cl, epe, gol, na, nh4, so4, zn
    2. 2164402Domain d4ccgb1: 4ccg B:1-152 [251363]
      Other proteins in same PDB: d4ccga2, d4ccgb2
      automated match to d1yh2a1
      complexed with cl, epe, gol, na, nh4, so4, zn
  24. Domain(s) for 4lad:
  25. Domain(s) for 4nr3:
  26. Domain(s) for 4nrg:
  27. Domain(s) for 4nri:
  28. Domain(s) for 4onl:
  29. Domain(s) for 4onm:
  30. Domain(s) for 4onn:
  31. Domain(s) for 4qpl:
    1. 2164370Domain d4qplb1: 4qpl B:1-147 [260380]
      Other proteins in same PDB: d4qplb2, d4qpld2
      automated match to d2yhob_
      complexed with v3l, zn
    2. 2164371Domain d4qpld1: 4qpl D:1-147 [260760]
      Other proteins in same PDB: d4qplb2, d4qpld2
      automated match to d2yhob_
      complexed with v3l, zn
  32. Domain(s) for 4s3o:
    1. 2164392Domain d4s3oa1: 4s3o A:2-147 [274919]
      Other proteins in same PDB: d4s3oa2, d4s3od2
      automated match to d3rpga_
      complexed with zn
    2. 2164393Domain d4s3od1: 4s3o D:2-147 [274920]
      Other proteins in same PDB: d4s3oa2, d4s3od2
      automated match to d3rpga_
      complexed with zn
  33. Domain(s) for 4v3k:
    1. 2164394Domain d4v3ka_: 4v3k A: [271275]
      Other proteins in same PDB: d4v3kb1, d4v3kb2, d4v3ke1, d4v3ke2
      automated match to d3a33a_
      complexed with cl, edo, zn
    2. 2164395Domain d4v3kd_: 4v3k D: [271277]
      Other proteins in same PDB: d4v3kb1, d4v3kb2, d4v3ke1, d4v3ke2
      automated match to d3a33a_
      complexed with cl, edo, zn
  34. Domain(s) for 4v3l:
  35. Domain(s) for 5aiu:
    1. 2164403Domain d5aiub_: 5aiu B: [274672]
      Other proteins in same PDB: d5aiuc_, d5aiuf_
      automated match to d3w31b_
      complexed with edo, zn
    2. 2164404Domain d5aiue_: 5aiu E: [274675]
      Other proteins in same PDB: d5aiuc_, d5aiuf_
      automated match to d3w31b_
      complexed with edo, zn
  36. Domain(s) for 5bnb:
    1. 2269287Domain d5bnbc_: 5bnb C: [312593]
      Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
      automated match to d1zdna1
    2. 2269298Domain d5bnbb_: 5bnb B: [312604]
      Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
      automated match to d1zdna1
    3. 2269403Domain d5bnba_: 5bnb A: [312709]
      Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
      automated match to d1zdna1
  37. Domain(s) for 5egg:
  38. Domain(s) for 5fer:
    1. 2274133Domain d5ferb_: 5fer B: [317434]
      Other proteins in same PDB: d5ferc_, d5ferf_
      automated match to d2c4pa_
      complexed with zn
    2. 2274181Domain d5fere_: 5fer E: [317482]
      Other proteins in same PDB: d5ferc_, d5ferf_
      automated match to d2c4pa_
      complexed with zn
  39. Domain(s) for 5fq2:
  40. Domain(s) for 5ifr:
  41. Domain(s) for 5mnj:
    1. 2291568Domain d5mnja_: 5mnj A: [334869]
      Other proteins in same PDB: d5mnjb_, d5mnjf_
      automated match to d2clwa_
      complexed with so4, zn
    2. 2291569Domain d5mnje_: 5mnj E: [334870]
      Other proteins in same PDB: d5mnjb_, d5mnjf_
      automated match to d2clwa_
      complexed with so4, zn
  42. Domain(s) for 5tut:
  43. Domain(s) for 5ulf:
    1. 2291897Domain d5ulfa1: 5ulf A:1-147 [335198]
      Other proteins in same PDB: d5ulfa2, d5ulfb_, d5ulfc2, d5ulfd_
      automated match to d2clwa_
      complexed with gol
    2. 2291915Domain d5ulfc1: 5ulf C:1-147 [335216]
      Other proteins in same PDB: d5ulfa2, d5ulfb_, d5ulfc2, d5ulfd_
      automated match to d2clwa_
      complexed with gol
  44. Domain(s) for 5ulh:
  45. Domain(s) for 5ulk:
  46. Domain(s) for 5vzw:
    1. 2294298Domain d5vzwb_: 5vzw B: [337599]
      Other proteins in same PDB: d5vzwc1, d5vzwc2, d5vzwd1, d5vzwd2
      automated match to d2clwa_
      complexed with zn
    2. 2294433Domain d5vzwa_: 5vzw A: [337734]
      Other proteins in same PDB: d5vzwc1, d5vzwc2, d5vzwd1, d5vzwd2
      automated match to d2clwa_
      complexed with zn

More info for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches: