SCOPe 2.08: Species: Human (Homo sapiens) [TaxId: 9606]

Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.20: UBC-like [54494] (1 superfamily)
alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
Superfamily d.20.1: UBC-like [54495] (5 families)
Family d.20.1.1: UBC-related [54496] (7 proteins)
Protein automated matches [190124] (13 species)
not a true protein
Species Human (Homo sapiens) [TaxId:9606] [186848] (52 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

Domain(s) for 1x23:
1. Domain d1x23b2: 1x23 B:1-147 [121616]
  Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
  automated match to d1ur6a_
2. Domain d1x23c2: 1x23 C:1-147 [121617]
  Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
  automated match to d1ur6a_
3. Domain d1x23d2: 1x23 D:1-147 [121618]
  Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
  automated match to d1ur6a_
Domain(s) for 2c4o:
1. Domain d2c4oa_: 2c4o A: [303632]
  automated match to d1x23d_
  complexed with gol, so4
2. Domain d2c4ob_: 2c4o B: [303633]
  automated match to d1x23d_
  complexed with gol, so4
3. Domain d2c4oc_: 2c4o C: [303634]
  automated match to d1x23d_
  complexed with gol, so4
4. Domain d2c4od_: 2c4o D: [303635]
  automated match to d1x23d_
  complexed with gol, so4
Domain(s) for 2c4p:
1. Domain d2c4pa_: 2c4p A: [163259]
  automated match to d1z2ua1
2. Domain d2c4pb_: 2c4p B: [163260]
  automated match to d1z2ua1
Domain(s) for 2clw:
1. Domain d2clwa_: 2clw A: [130596]
  automated match to d1ur6a_
  complexed with gol, so4
2. Domain d2clwb_: 2clw B: [130597]
  automated match to d1ur6a_
  complexed with gol, so4
3. Domain d2clwc_: 2clw C: [130598]
  automated match to d1ur6a_
  complexed with gol, so4
4. Domain d2clwd_: 2clw D: [130599]
  automated match to d1ur6a_
  complexed with gol, so4
Domain(s) for 2cyx:
1. Domain d2cyxa1: 2cyx A:1-165 [163514]
  Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
  automated match to d2ucza_
2. Domain d2cyxb1: 2cyx B:1-165 [163515]
  Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
  automated match to d2ucza_
3. Domain d2cyxc1: 2cyx C:1-165 [163516]
  Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
  automated match to d2ucza_
Domain(s) for 2fuh:
- Domain d2fuha_: 2fuh A: [134173]
  Other proteins in same PDB: d2fuhb_
  automated match to d3rpga_
Domain(s) for 2kly:
- Domain d2klya_: 2kly A: [242558]
  automated match to d3fsha_
Domain(s) for 2lxp:
- Domain d2lxpa_: 2lxp A: [243027]
  Other proteins in same PDB: d2lxpc_
  automated match to d3fsha_
  complexed with zn
Domain(s) for 2qgx:
1. Domain d2qgxa_: 2qgx A: [167587]
  automated match to d1zuoa1
2. Domain d2qgxb_: 2qgx B: [167588]
  automated match to d1zuoa1
3. Domain d2qgxc_: 2qgx C: [167589]
  automated match to d1zuoa1
4. Domain d2qgxd_: 2qgx D: [167590]
  automated match to d1zuoa1
Domain(s) for 2yho:
1. Domain d2yhob1: 2yho B:1-147 [170787]
  Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
  automated match to d1z2ua1
  complexed with act, zn
2. Domain d2yhod1: 2yho D:1-147 [170788]
  Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
  automated match to d1z2ua1
  complexed with act, zn
3. Domain d2yhof1: 2yho F:1-147 [170789]
  Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
  automated match to d1z2ua1
  complexed with act, zn
4. Domain d2yhoh_: 2yho H: [170790]
  Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
  automated match to d1z2ua1
  complexed with act, zn
Domain(s) for 3a33:
- Domain d3a33a1: 3a33 A:1-147 [171693]
  Other proteins in same PDB: d3a33a2, d3a33b_
  automated match to d1ur6a_
  complexed with gol
Domain(s) for 3h8k:
- Domain d3h8ka_: 3h8k A: [177322]
  automated match to d2ucza_
Domain(s) for 3hct:
- Domain d3hctb_: 3hct B: [177394]
  automated match to d1j7db_
  protein/DNA complex; complexed with zn
Domain(s) for 3hcu:
1. Domain d3hcub_: 3hcu B: [177395]
  automated match to d1j7db_
  protein/DNA complex; complexed with zn
2. Domain d3hcud_: 3hcu D: [177396]
  automated match to d1j7db_
  protein/DNA complex; complexed with zn
Domain(s) for 3l1z:
- Domain d3l1za1: 3l1z A:1-147 [247326]
  Other proteins in same PDB: d3l1za2, d3l1zb_
  automated match to d3l1ya_
Domain(s) for 3ptf:
1. Domain d3ptfa1: 3ptf A:1-147 [183968]
  Other proteins in same PDB: d3ptfa2, d3ptfb2, d3ptfc_, d3ptfd1, d3ptfd2
  automated match to d1z2ua1
2. Domain d3ptfb1: 3ptf B:1-147 [183969]
  Other proteins in same PDB: d3ptfa2, d3ptfb2, d3ptfc_, d3ptfd1, d3ptfd2
  automated match to d1z2ua1
Domain(s) for 3rpg:
- Domain d3rpga1: 3rpg A:2-147 [185091]
  Other proteins in same PDB: d3rpga2
  automated match to d1x23a1
  complexed with zn
Domain(s) for 3tgd:
- Domain d3tgda1: 3tgd A:1-147 [196186]
  Other proteins in same PDB: d3tgda2
  automated match to d2clwa_

Domain(s) for 3von:

Domain d3vonc_: 3von C: [250627]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vone_: 3von E: [250629]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vong_: 3von G: [250631]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonj_: 3von J: [250634]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonl_: 3von L: [250636]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonn_: 3von N: [250638]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonq_: 3von Q: [250641]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vons_: 3von S: [250643]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonu_: 3von U: [250645]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonx_: 3von X: [250648]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain d3vonz_: 3von Z: [250650]
Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
automated match to d2c2vb_

Domain(s) for 4ap4:
1. Domain d4ap4b1: 4ap4 B:1-147 [194914]
  Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
  automated match to d2c4pb_
  complexed with zn
2. Domain d4ap4e_: 4ap4 E: [201467]
  Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
  automated match to d4ap4b_
  complexed with zn
Domain(s) for 4auq:
1. Domain d4auqa_: 4auq A: [194819]
  Other proteins in same PDB: d4auqc1, d4auqc2, d4auqf_
  automated match to d3a33a_
  complexed with zn
2. Domain d4auqd_: 4auq D: [194817]
  Other proteins in same PDB: d4auqc1, d4auqc2, d4auqf_
  automated match to d3a33a_
  complexed with zn
Domain(s) for 4ccg:
1. Domain d4ccga1: 4ccg A:1-153 [251362]
  Other proteins in same PDB: d4ccga2, d4ccgb2
  automated match to d1yh2a1
  complexed with cl, epe, gol, na, nh4, so4, zn
2. Domain d4ccgb1: 4ccg B:1-152 [251363]
  Other proteins in same PDB: d4ccga2, d4ccgb2
  automated match to d1yh2a1
  complexed with cl, epe, gol, na, nh4, so4, zn
Domain(s) for 4lad:
- Domain d4lada_: 4lad A: [224619]
  automated match to d3fsha_
  complexed with oxl, zn
Domain(s) for 4nr3:
- Domain d4nr3b_: 4nr3 B: [261521]
  Other proteins in same PDB: d4nr3a_
  automated match to d1x23d_
  mutant
Domain(s) for 4nrg:
- Domain d4nrgb_: 4nrg B: [261523]
  Other proteins in same PDB: d4nrga_
  automated match to d1x23d_
  mutant
Domain(s) for 4nri:
- Domain d4nrib_: 4nri B: [261661]
  Other proteins in same PDB: d4nria_
  automated match to d3tgda_
  complexed with gol; mutant
Domain(s) for 4onl:
- Domain d4onlb_: 4onl B: [272280]
  Other proteins in same PDB: d4onla_
  automated match to d1x23d_
Domain(s) for 4onm:
- Domain d4onmb_: 4onm B: [272275]
  Other proteins in same PDB: d4onma_
  automated match to d1x23d_
  complexed with gol, n2f
Domain(s) for 4onn:
- Domain d4onnb_: 4onn B: [272279]
  Other proteins in same PDB: d4onna_
  automated match to d1x23d_
  complexed with by1, gol
Domain(s) for 4qpl:
1. Domain d4qplb1: 4qpl B:1-147 [260380]
  Other proteins in same PDB: d4qplb2, d4qpld2
  automated match to d2yhob_
  complexed with v3l, zn
2. Domain d4qpld1: 4qpl D:1-147 [260760]
  Other proteins in same PDB: d4qplb2, d4qpld2
  automated match to d2yhob_
  complexed with v3l, zn
Domain(s) for 4s3o:
1. Domain d4s3oa1: 4s3o A:2-147 [274919]
  Other proteins in same PDB: d4s3oa2, d4s3od2
  automated match to d3rpga_
  complexed with zn
2. Domain d4s3od1: 4s3o D:2-147 [274920]
  Other proteins in same PDB: d4s3oa2, d4s3od2
  automated match to d3rpga_
  complexed with zn
Domain(s) for 4v3k:
1. Domain d4v3ka_: 4v3k A: [271275]
  Other proteins in same PDB: d4v3kb1, d4v3kb2, d4v3ke1, d4v3ke2
  automated match to d3a33a_
  complexed with cl, edo, zn
2. Domain d4v3kd_: 4v3k D: [271277]
  Other proteins in same PDB: d4v3kb1, d4v3kb2, d4v3ke1, d4v3ke2
  automated match to d3a33a_
  complexed with cl, edo, zn
Domain(s) for 4v3l:
- Domain d4v3la_: 4v3l A: [271281]
  Other proteins in same PDB: d4v3lb1, d4v3lb2, d4v3ld1, d4v3ld2
  automated match to d3a33a_
  complexed with edo, zn
Domain(s) for 5aiu:
1. Domain d5aiub1: 5aiu B:4-151 [274672]
  Other proteins in same PDB: d5aiub2, d5aiuc_, d5aiue2, d5aiuf_
  automated match to d3w31b_
  complexed with edo, zn
2. Domain d5aiue1: 5aiu E:4-151 [274675]
  Other proteins in same PDB: d5aiub2, d5aiuc_, d5aiue2, d5aiuf_
  automated match to d3w31b_
  complexed with edo, zn
Domain(s) for 5bnb:
1. Domain d5bnba_: 5bnb A: [312709]
  Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
  automated match to d1zdna1
2. Domain d5bnbb_: 5bnb B: [312604]
  Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
  automated match to d1zdna1
3. Domain d5bnbc_: 5bnb C: [312593]
  Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
  automated match to d1zdna1
Domain(s) for 5egg:
- Domain d5egga1: 5egg A:1-147 [324634]
  Other proteins in same PDB: d5egga2
  automated match to d2clwa_
Domain(s) for 5fer:
1. Domain d5ferb_: 5fer B: [317434]
  Other proteins in same PDB: d5ferc_, d5ferf_
  automated match to d2c4pa_
  complexed with zn
2. Domain d5fere_: 5fer E: [317482]
  Other proteins in same PDB: d5ferc_, d5ferf_
  automated match to d2c4pa_
  complexed with zn
Domain(s) for 5fq2:
- Domain d5fq2a_: 5fq2 A: [326218]
  automated match to d1u9ba_
Domain(s) for 5ifr:
- Domain d5ifra1: 5ifr A:2-147 [317253]
  Other proteins in same PDB: d5ifra2, d5ifrb_
  automated match to d2gmia1
  complexed with gol
Domain(s) for 5tut:
- Domain d5tuta1: 5tut A:1-147 [341362]
  Other proteins in same PDB: d5tuta2, d5tutb_
  automated match to d2c2vb_
Domain(s) for 6cp0:
- Domain d6cp0b1: 6cp0 B:1-147 [355469]
  Other proteins in same PDB: d6cp0b2
  automated match to d2clwa_
Domain(s) for 6cyo:
- Domain d6cyoa1: 6cyo A:1-151 [361193]
  Other proteins in same PDB: d6cyoa2
  automated match to d2y4wa_
Domain(s) for 6cyr:
- Domain d6cyra1: 6cyr A:1-152 [361018]
  Other proteins in same PDB: d6cyra2
  automated match to d2y4wa_
Domain(s) for 6d4p:
- Domain d6d4pa1: 6d4p A:1-147 [369679]
  Other proteins in same PDB: d6d4pa2, d6d4pc1, d6d4pc2
  automated match to d2c4pa_
Domain(s) for 6qh3:
1. Domain d6qh3a_: 6qh3 A: [371384]
  automated match to d1zdna1
  complexed with edo
2. Domain d6qh3b_: 6qh3 B: [371383]
  automated match to d1zdna1
  complexed with edo
Domain(s) for 6qhk:
1. Domain d6qhka_: 6qhk A: [371352]
  automated match to d1zdna1
  complexed with cl, edo, pa0
2. Domain d6qhkb_: 6qhk B: [371354]
  automated match to d1zdna1
  complexed with cl, edo, pa0
Domain(s) for 6s96:
1. Domain d6s96a_: 6s96 A: [391502]
  automated match to d1zdna1
  complexed with fmt, na
2. Domain d6s96b_: 6s96 B: [391468]
  automated match to d1zdna1
  complexed with fmt, na
Domain(s) for 6s98:
1. Domain d6s98a_: 6s98 A: [391444]
  automated match to d1zdna1
  complexed with act, edo, na
2. Domain d6s98b_: 6s98 B: [391454]
  automated match to d1zdna1
  complexed with act, edo, na
Domain(s) for 6t7f:
- Domain d6t7fb1: 6t7f B:2-147 [391846]
  Other proteins in same PDB: d6t7fb2, d6t7fc_
  automated match to d2c2vb_
  complexed with lwz, zn
Domain(s) for 7ahf:
1. Domain d7ahfb_: 7ahf B: [420478]
  automated match to d1zdna1
  complexed with edo, gol
2. Domain d7ahfa_: 7ahf A: [420501]
  automated match to d1zdna1
  complexed with edo, gol
Domain(s) for 7bbd:
- Domain d7bbda1: 7bbd A:1-144 [398473]
  Other proteins in same PDB: d7bbda2, d7bbdc1, d7bbdc2, d7bbdd_
  automated match to d2c2vc1
  complexed with zn
Domain(s) for 7bbf:
1. Domain d7bbfb_: 7bbf B: [398456]
  Other proteins in same PDB: d7bbfa_, d7bbfc_, d7bbfd_, d7bbff_, d7bbfg_, d7bbfi_
  automated match to d2c2vc1
2. Domain d7bbfe_: 7bbf E: [398364]
  Other proteins in same PDB: d7bbfa_, d7bbfc_, d7bbfd_, d7bbff_, d7bbfg_, d7bbfi_
  automated match to d2c2vc1
3. Domain d7bbfh_: 7bbf H: [398407]
  Other proteins in same PDB: d7bbfa_, d7bbfc_, d7bbfd_, d7bbff_, d7bbfg_, d7bbfi_
  automated match to d2c2vc1

More info for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches:

Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches first appeared in SCOPe 2.01
Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches appears in SCOPe 2.07