Lineage for d5ferf_ (5fer F:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (8 species)
  7. 2501413Species Cow (Bos taurus) [TaxId:9913] [224919] (37 PDB entries)
  8. 2501475Domain d5ferf_: 5fer F: [317466]
    Other proteins in same PDB: d5ferb_, d5fere_
    automated match to d1ogwa_
    complexed with zn

Details for d5ferf_

PDB Entry: 5fer (more details), 2.34 Å

PDB Description: complex of trim25 ring with ubch5-ub
PDB Compounds: (F:) Ubiquitin-40S ribosomal protein S27a

SCOPe Domain Sequences for d5ferf_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ferf_ d.15.1.1 (F:) Ubiquitin {Cow (Bos taurus) [TaxId: 9913]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d5ferf_:

Click to download the PDB-style file with coordinates for d5ferf_.
(The format of our PDB-style files is described here.)

Timeline for d5ferf_: