Lineage for d4v3kb1 (4v3k B:1-76)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158943Protein automated matches [190118] (9 species)
    not a true protein
  7. 2158968Species Human (Homo sapiens) [TaxId:9606] [189560] (84 PDB entries)
  8. 2159048Domain d4v3kb1: 4v3k B:1-76 [271276]
    Other proteins in same PDB: d4v3ka_, d4v3kb2, d4v3kd_, d4v3ke2
    automated match to d3dbhi_
    complexed with cl, edo, zn

Details for d4v3kb1

PDB Entry: 4v3k (more details), 2.04 Å

PDB Description: rnf38-ubch5b-ub complex
PDB Compounds: (B:) Polyubiquitin-C

SCOPe Domain Sequences for d4v3kb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4v3kb1 d.15.1.1 (B:1-76) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4v3kb1:

Click to download the PDB-style file with coordinates for d4v3kb1.
(The format of our PDB-style files is described here.)

Timeline for d4v3kb1:

  • d4v3kb1 first appeared in SCOPe 2.05, called d4v3kb_