Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2546033Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 2546034Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 2546035Family d.20.1.1: UBC-related [54496] (7 proteins)
  6. 2546288Protein automated matches [190124] (13 species)
    not a true protein
  7. 2546306Species Human (Homo sapiens) [TaxId:9606] [186848] (60 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1x23:
    1. 2546316Domain d1x23b2: 1x23 B:1-147 [121616]
      Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
      automated match to d1ur6a_
    2. 2546317Domain d1x23c2: 1x23 C:1-147 [121617]
      Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
      automated match to d1ur6a_
    3. 2546318Domain d1x23d2: 1x23 D:1-147 [121618]
      Other proteins in same PDB: d1x23a1, d1x23a2, d1x23b3, d1x23c3, d1x23d3
      automated match to d1ur6a_
  2. Domain(s) for 2c2v:
    1. 2546418Domain d2c2vb_: 2c2v B: [129686]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    2. 2546419Domain d2c2ve_: 2c2v E: [129688]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    3. 2546420Domain d2c2vf_: 2c2v F: [129689]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
    4. 2546421Domain d2c2vh_: 2c2v H: [129690]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    5. 2546422Domain d2c2vi_: 2c2v I: [129691]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
    6. 2546423Domain d2c2vk_: 2c2v K: [129692]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7db_
    7. 2546424Domain d2c2vl_: 2c2v L: [129693]
      Other proteins in same PDB: d2c2vc1, d2c2vs1, d2c2vt_, d2c2vu_, d2c2vv_
      automated match to d1j7da_
  3. Domain(s) for 2c4o:
    1. 2546346Domain d2c4oa_: 2c4o A: [303632]
      automated match to d1x23d_
      complexed with gol, so4
    2. 2546347Domain d2c4ob_: 2c4o B: [303633]
      automated match to d1x23d_
      complexed with gol, so4
    3. 2546348Domain d2c4oc_: 2c4o C: [303634]
      automated match to d1x23d_
      complexed with gol, so4
    4. 2546349Domain d2c4od_: 2c4o D: [303635]
      automated match to d1x23d_
      complexed with gol, so4
  4. Domain(s) for 2c4p:
    1. 2546366Domain d2c4pa_: 2c4p A: [163259]
      automated match to d1z2ua1
    2. 2546367Domain d2c4pb_: 2c4p B: [163260]
      automated match to d1z2ua1
  5. Domain(s) for 2clw:
    1. 2546340Domain d2clwa_: 2clw A: [130596]
      automated match to d1ur6a_
      complexed with gol, so4
    2. 2546341Domain d2clwb_: 2clw B: [130597]
      automated match to d1ur6a_
      complexed with gol, so4
    3. 2546342Domain d2clwc_: 2clw C: [130598]
      automated match to d1ur6a_
      complexed with gol, so4
    4. 2546343Domain d2clwd_: 2clw D: [130599]
      automated match to d1ur6a_
      complexed with gol, so4
  6. Domain(s) for 2cyx:
    1. 2546391Domain d2cyxa1: 2cyx A:1-165 [163514]
      Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
      automated match to d2ucza_
    2. 2546392Domain d2cyxb1: 2cyx B:1-165 [163515]
      Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
      automated match to d2ucza_
    3. 2546393Domain d2cyxc1: 2cyx C:1-165 [163516]
      Other proteins in same PDB: d2cyxa2, d2cyxb2, d2cyxc2
      automated match to d2ucza_
  7. Domain(s) for 2fuh:
  8. Domain(s) for 2kly:
  9. Domain(s) for 2lxp:
  10. Domain(s) for 2qgx:
    1. 2546334Domain d2qgxa_: 2qgx A: [167587]
      automated match to d1zuoa1
    2. 2546335Domain d2qgxb_: 2qgx B: [167588]
      automated match to d1zuoa1
    3. 2546336Domain d2qgxc_: 2qgx C: [167589]
      automated match to d1zuoa1
    4. 2546337Domain d2qgxd_: 2qgx D: [167590]
      automated match to d1zuoa1
  11. Domain(s) for 2yho:
    1. 2546320Domain d2yhob1: 2yho B:1-147 [170787]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
    2. 2546321Domain d2yhod1: 2yho D:1-147 [170788]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
    3. 2546322Domain d2yhof1: 2yho F:1-147 [170789]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
    4. 2546323Domain d2yhoh_: 2yho H: [170790]
      Other proteins in same PDB: d2yhob2, d2yhod2, d2yhof2
      automated match to d1z2ua1
      complexed with act, zn
  12. Domain(s) for 3a33:
  13. Domain(s) for 3h8k:
  14. Domain(s) for 3hct:
  15. Domain(s) for 3hcu:
    1. 2546416Domain d3hcub_: 3hcu B: [177395]
      automated match to d1j7db_
      protein/DNA complex; complexed with zn
    2. 2546417Domain d3hcud_: 3hcu D: [177396]
      automated match to d1j7db_
      protein/DNA complex; complexed with zn
  16. Domain(s) for 3l1z:
  17. Domain(s) for 3ptf:
    1. 2546361Domain d3ptfa1: 3ptf A:1-147 [183968]
      Other proteins in same PDB: d3ptfa2, d3ptfb2, d3ptfc_, d3ptfd1, d3ptfd2
      automated match to d1z2ua1
    2. 2546362Domain d3ptfb1: 3ptf B:1-147 [183969]
      Other proteins in same PDB: d3ptfa2, d3ptfb2, d3ptfc_, d3ptfd1, d3ptfd2
      automated match to d1z2ua1
  18. Domain(s) for 3rpg:
  19. Domain(s) for 3tgd:
  20. Domain(s) for 3von:
    1. 2546401Domain d3vonc_: 3von C: [250627]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    2. 2546402Domain d3vone_: 3von E: [250629]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    3. 2546403Domain d3vong_: 3von G: [250631]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    4. 2546404Domain d3vonj_: 3von J: [250634]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    5. 2546405Domain d3vonl_: 3von L: [250636]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    6. 2546406Domain d3vonn_: 3von N: [250638]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    7. 2546407Domain d3vonq_: 3von Q: [250641]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    8. 2546408Domain d3vons_: 3von S: [250643]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    9. 2546409Domain d3vonu_: 3von U: [250645]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    10. 2546410Domain d3vonx_: 3von X: [250648]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
    11. 2546411Domain d3vonz_: 3von Z: [250650]
      Other proteins in same PDB: d3vona_, d3vonb_, d3vond_, d3vonf_, d3vonh_, d3voni_, d3vonk_, d3vonm_, d3vono_, d3vonp_, d3vonr_, d3vont_, d3vonv_, d3vonw_, d3vony_
      automated match to d2c2vb_
  21. Domain(s) for 4ap4:
    1. 2546383Domain d4ap4b1: 4ap4 B:1-147 [194914]
      Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
      automated match to d2c4pb_
      complexed with zn
    2. 2546384Domain d4ap4e_: 4ap4 E: [201467]
      Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
      automated match to d4ap4b_
      complexed with zn
  22. Domain(s) for 4auq:
    1. 2546327Domain d4auqa_: 4auq A: [194819]
      Other proteins in same PDB: d4auqc1, d4auqc2, d4auqf_
      automated match to d3a33a_
      complexed with zn
    2. 2546328Domain d4auqd_: 4auq D: [194817]
      Other proteins in same PDB: d4auqc1, d4auqc2, d4auqf_
      automated match to d3a33a_
      complexed with zn
  23. Domain(s) for 4ccg:
    1. 2546374Domain d4ccga1: 4ccg A:1-153 [251362]
      Other proteins in same PDB: d4ccga2, d4ccgb2
      automated match to d1yh2a1
      complexed with cl, epe, gol, na, nh4, so4, zn
    2. 2546375Domain d4ccgb1: 4ccg B:1-152 [251363]
      Other proteins in same PDB: d4ccga2, d4ccgb2
      automated match to d1yh2a1
      complexed with cl, epe, gol, na, nh4, so4, zn
  24. Domain(s) for 4lad:
  25. Domain(s) for 4nr3:
  26. Domain(s) for 4nrg:
  27. Domain(s) for 4nri:
  28. Domain(s) for 4onl:
  29. Domain(s) for 4onm:
  30. Domain(s) for 4onn:
  31. Domain(s) for 4qpl:
    1. 2546344Domain d4qplb1: 4qpl B:1-147 [260380]
      Other proteins in same PDB: d4qplb2, d4qpld2
      automated match to d2yhob_
      complexed with v3l, zn
    2. 2546345Domain d4qpld1: 4qpl D:1-147 [260760]
      Other proteins in same PDB: d4qplb2, d4qpld2
      automated match to d2yhob_
      complexed with v3l, zn
  32. Domain(s) for 4s3o:
    1. 2546357Domain d4s3oa1: 4s3o A:2-147 [274919]
      Other proteins in same PDB: d4s3oa2, d4s3od2
      automated match to d3rpga_
      complexed with zn
    2. 2546358Domain d4s3od1: 4s3o D:2-147 [274920]
      Other proteins in same PDB: d4s3oa2, d4s3od2
      automated match to d3rpga_
      complexed with zn
  33. Domain(s) for 4v3k:
    1. 2546359Domain d4v3ka_: 4v3k A: [271275]
      Other proteins in same PDB: d4v3kb1, d4v3kb2, d4v3ke1, d4v3ke2
      automated match to d3a33a_
      complexed with cl, edo, zn
    2. 2546360Domain d4v3kd_: 4v3k D: [271277]
      Other proteins in same PDB: d4v3kb1, d4v3kb2, d4v3ke1, d4v3ke2
      automated match to d3a33a_
      complexed with cl, edo, zn
  34. Domain(s) for 4v3l:
  35. Domain(s) for 5aiu:
    1. 2546385Domain d5aiub1: 5aiu B:4-151 [274672]
      Other proteins in same PDB: d5aiub2, d5aiuc_, d5aiue2, d5aiuf_
      automated match to d3w31b_
      complexed with edo, zn
    2. 2546386Domain d5aiue1: 5aiu E:4-151 [274675]
      Other proteins in same PDB: d5aiub2, d5aiuc_, d5aiue2, d5aiuf_
      automated match to d3w31b_
      complexed with edo, zn
  36. Domain(s) for 5bnb:
    1. 2546398Domain d5bnba_: 5bnb A: [312709]
      Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
      automated match to d1zdna1
    2. 2546399Domain d5bnbb_: 5bnb B: [312604]
      Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
      automated match to d1zdna1
    3. 2546400Domain d5bnbc_: 5bnb C: [312593]
      Other proteins in same PDB: d5bnbe_, d5bnbf_, d5bnbg_, d5bnbi_
      automated match to d1zdna1
  37. Domain(s) for 5egg:
  38. Domain(s) for 5fer:
    1. 2546394Domain d5ferb_: 5fer B: [317434]
      Other proteins in same PDB: d5ferc_, d5ferf_
      automated match to d2c4pa_
      complexed with zn
    2. 2546395Domain d5fere_: 5fer E: [317482]
      Other proteins in same PDB: d5ferc_, d5ferf_
      automated match to d2c4pa_
      complexed with zn
  39. Domain(s) for 5fq2:
  40. Domain(s) for 5ifr:
  41. Domain(s) for 5tut:
  42. Domain(s) for 6cp0:
  43. Domain(s) for 6cyo:
  44. Domain(s) for 6cyr:
  45. Domain(s) for 6d4p:
  46. Domain(s) for 6d6i:
    1. 2546412Domain d6d6ib_: 6d6i B: [369631]
      Other proteins in same PDB: d6d6ia_, d6d6ic_, d6d6id_, d6d6if_
      automated match to d2c2vb_
    2. 2546413Domain d6d6ie_: 6d6i E: [369659]
      Other proteins in same PDB: d6d6ia_, d6d6ic_, d6d6id_, d6d6if_
      automated match to d2c2vb_
  47. Domain(s) for 6hpr:
  48. Domain(s) for 6m2c:
    1. 2546387Domain d6m2ca1: 6m2c A:1-147 [402419]
      Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
      automated match to d2clwa_
      complexed with zn
    2. 2546388Domain d6m2cb1: 6m2c B:1-147 [402509]
      Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
      automated match to d2clwa_
      complexed with zn
    3. 2546389Domain d6m2cc1: 6m2c C:1-147 [402431]
      Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
      automated match to d2clwa_
      complexed with zn
    4. 2546390Domain d6m2cd1: 6m2c D:1-147 [402444]
      Other proteins in same PDB: d6m2ca2, d6m2cb2, d6m2cc2, d6m2cd2
      automated match to d2clwa_
      complexed with zn
  49. Domain(s) for 6qh3:
    1. 2546425Domain d6qh3a_: 6qh3 A: [371384]
      automated match to d1zdna1
      complexed with edo
    2. 2546426Domain d6qh3b_: 6qh3 B: [371383]
      automated match to d1zdna1
      complexed with edo
  50. Domain(s) for 6qhk:
    1. 2546354Domain d6qhka_: 6qhk A: [371352]
      automated match to d1zdna1
      complexed with cl, edo, pa0
    2. 2546355Domain d6qhkb_: 6qhk B: [371354]
      automated match to d1zdna1
      complexed with cl, edo, pa0
  51. Domain(s) for 6s96:
    1. 2546350Domain d6s96a_: 6s96 A: [391502]
      automated match to d1zdna1
      complexed with fmt, na
    2. 2546351Domain d6s96b_: 6s96 B: [391468]
      automated match to d1zdna1
      complexed with fmt, na
  52. Domain(s) for 6s98:
    1. 2546309Domain d6s98a_: 6s98 A: [391444]
      automated match to d1zdna1
      complexed with act, edo, na
    2. 2546310Domain d6s98b_: 6s98 B: [391454]
      automated match to d1zdna1
      complexed with act, edo, na
  53. Domain(s) for 6sqo:
    1. 2546312Domain d6sqob_: 6sqo B: [385036]
      Other proteins in same PDB: d6sqoc1, d6sqoc2, d6sqof1, d6sqof2
      automated match to d4v3ka_
      complexed with cl, no3, zn
    2. 2546313Domain d6sqoe_: 6sqo E: [385048]
      Other proteins in same PDB: d6sqoc1, d6sqoc2, d6sqof1, d6sqof2
      automated match to d4v3ka_
      complexed with cl, no3, zn
  54. Domain(s) for 6sqr:
    1. 2546369Domain d6sqrb_: 6sqr B: [385055]
      Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
      automated match to d4v3ka_
      complexed with edo, no3, zn
    2. 2546370Domain d6sqre_: 6sqr E: [385063]
      Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
      automated match to d4v3ka_
      complexed with edo, no3, zn
    3. 2546371Domain d6sqrh_: 6sqr H: [385035]
      Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
      automated match to d4v3ka_
      complexed with edo, no3, zn
    4. 2546372Domain d6sqrk_: 6sqr K: [385054]
      Other proteins in same PDB: d6sqrc1, d6sqrc2, d6sqrf1, d6sqrf2, d6sqri_, d6sqrl1, d6sqrl2
      automated match to d4v3ka_
      complexed with edo, no3, zn
  55. Domain(s) for 6sqs:
    1. 2546332Domain d6sqsb_: 6sqs B: [385034]
      Other proteins in same PDB: d6sqsc1, d6sqsc2, d6sqsf1, d6sqsf2
      automated match to d4v3ka_
      complexed with sep, zn
    2. 2546333Domain d6sqse_: 6sqs E: [385040]
      Other proteins in same PDB: d6sqsc1, d6sqsc2, d6sqsf1, d6sqsf2
      automated match to d4v3ka_
      complexed with sep, zn
  56. Domain(s) for 6t7f:
  57. Domain(s) for 6w7z:
  58. Domain(s) for 7bbd:
    1. 2546352Domain d7bbda1: 7bbd A:1-144 [398473]
      Other proteins in same PDB: d7bbda2, d7bbdc2, d7bbdd_
      automated match to d2c2vc1
      complexed with zn
    2. 2546353Domain d7bbdc1: 7bbd C:1-152 [398433]
      Other proteins in same PDB: d7bbda2, d7bbdc2, d7bbdd_
      automated match to d2c2vb_
      complexed with zn
  59. Domain(s) for 7bbf:
    1. 2546377Domain d7bbfa_: 7bbf A: [398421]
      Other proteins in same PDB: d7bbfc_, d7bbff_, d7bbfi_
      automated match to d2c2vb_
    2. 2546378Domain d7bbfb_: 7bbf B: [398456]
      Other proteins in same PDB: d7bbfc_, d7bbff_, d7bbfi_
      automated match to d2c2vc1
    3. 2546379Domain d7bbfd_: 7bbf D: [398384]
      Other proteins in same PDB: d7bbfc_, d7bbff_, d7bbfi_
      automated match to d2c2vb_
    4. 2546380Domain d7bbfe_: 7bbf E: [398364]
      Other proteins in same PDB: d7bbfc_, d7bbff_, d7bbfi_
      automated match to d2c2vc1
    5. 2546381Domain d7bbfg_: 7bbf G: [398409]
      Other proteins in same PDB: d7bbfc_, d7bbff_, d7bbfi_
      automated match to d2c2vb_
    6. 2546382Domain d7bbfh_: 7bbf H: [398407]
      Other proteins in same PDB: d7bbfc_, d7bbff_, d7bbfi_
      automated match to d2c2vc1
  60. Domain(s) for 7bol:

More info for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.20.1.1 automated matches: