Lineage for Protein: Cyclodextrin glycosyltransferase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081720Protein Cyclodextrin glycosyltransferase [51452] (5 species)
    contains two more all-beta domains, one is Immunoglobulin-like and the other is trasthyretin-like

Species:

  1. 2081721Bacillus circulans, different strains [TaxId:1397] [51453] (36 PDB entries)
    1. Domain for 1cdg:
    2. Domain for 1cgt:
    3. Domain for 1cgu:
    4. Domain for 1cgv:
    5. Domain for 1cgw:
    6. Domain for 1cgx:
    7. Domain for 1cgy:
    8. Domain for 1cxe:
    9. Domain for 1cxf:
    10. Domain for 1cxh:
    11. Domain for 1cxi:
    12. Domain for 1cxk:
    13. Domain for 1cxl:
    14. Domain for 1d3c:
    15. Domain for 1dtu:
    16. Domain for 1eo5:
    17. Domain for 1eo7:
    18. Domain for 1kck:
    19. Domain for 1kcl:
    20. Domain for 1ot1:
    21. Domain for 1ot2:
    22. Domain for 1pez:
    23. Domain for 1pj9:
    24. Domains for 1tcm:
      1. 2081751Domain d1tcma4: 1tcm A:1-406 [28727]
        Other proteins in same PDB: d1tcma1, d1tcma2, d1tcma3, d1tcmb1, d1tcmb2, d1tcmb3
        complexed with ca; mutant
      2. 2081752Domain d1tcmb4: 1tcm B:1-406 [28728]
        Other proteins in same PDB: d1tcma1, d1tcma2, d1tcma3, d1tcmb1, d1tcmb2, d1tcmb3
        complexed with ca; mutant
    25. Domains for 1ukq:
      1. 2081735Domain d1ukqa4: 1ukq A:1-406 [99512]
        Other proteins in same PDB: d1ukqa1, d1ukqa2, d1ukqa3, d1ukqb1, d1ukqb2, d1ukqb3
        complexed with ca
      2. 2081736Domain d1ukqb4: 1ukq B:1-406 [99516]
        Other proteins in same PDB: d1ukqa1, d1ukqa2, d1ukqa3, d1ukqb1, d1ukqb2, d1ukqb3
        complexed with ca
    26. Domains for 1uks:
      1. 2081725Domain d1uksa4: 1uks A:1-406 [99520]
        Other proteins in same PDB: d1uksa1, d1uksa2, d1uksa3, d1uksb1, d1uksb2, d1uksb3
        complexed with ca; mutant
      2. 2081726Domain d1uksb4: 1uks B:1-406 [99524]
        Other proteins in same PDB: d1uksa1, d1uksa2, d1uksa3, d1uksb1, d1uksb2, d1uksb3
        complexed with ca; mutant
    27. Domains for 1ukt:
      1. 2081738Domain d1ukta4: 1ukt A:1-406 [99528]
        Other proteins in same PDB: d1ukta1, d1ukta2, d1ukta3, d1uktb1, d1uktb2, d1uktb3
        complexed with ca; mutant
      2. 2081739Domain d1uktb4: 1ukt B:1-406 [99532]
        Other proteins in same PDB: d1ukta1, d1ukta2, d1ukta3, d1uktb1, d1uktb2, d1uktb3
        complexed with ca; mutant
    28. Domain for 2cxg:
    29. Domain for 2dij:
    30. Domain for 3cgt:
    31. Domain for 4cgt:
    32. Domain for 5cgt:
    33. Domain for 6cgt:
    34. Domain for 7cgt:
    35. Domain for 8cgt:
    36. Domain for 9cgt:
  2. 2081762Bacillus sp. 1011, alkaliphilic [TaxId:1410] [51456] (8 PDB entries)
    Uniprot P05618
    1. Domains for 1d7f:
      1. 2081765Domain d1d7fa4: 1d7f A:1-406 [28742]
        Other proteins in same PDB: d1d7fa1, d1d7fa2, d1d7fa3, d1d7fb1, d1d7fb2, d1d7fb3
        complexed with ca
      2. 2081766Domain d1d7fb4: 1d7f B:1-406 [28743]
        Other proteins in same PDB: d1d7fa1, d1d7fa2, d1d7fa3, d1d7fb1, d1d7fb2, d1d7fb3
        complexed with ca
    2. Domains for 1ded:
      1. 2081775Domain d1deda4: 1ded A:1-406 [28744]
        Other proteins in same PDB: d1deda1, d1deda2, d1deda3, d1dedb1, d1dedb2, d1dedb3
        complexed with ca, qps
      2. 2081776Domain d1dedb4: 1ded B:1-406 [28745]
        Other proteins in same PDB: d1deda1, d1deda2, d1deda3, d1dedb1, d1dedb2, d1dedb3
        complexed with ca, qps
    3. Domains for 1i75:
      1. 2081769Domain d1i75a4: 1i75 A:1-406 [61872]
        Other proteins in same PDB: d1i75a1, d1i75a2, d1i75a3, d1i75b1, d1i75b2, d1i75b3
        complexed with ca, noj
      2. 2081770Domain d1i75b4: 1i75 B:1-406 [61876]
        Other proteins in same PDB: d1i75a1, d1i75a2, d1i75a3, d1i75b1, d1i75b2, d1i75b3
        complexed with ca, noj
    4. Domains for 1pam:
      1. 2081763Domain d1pama4: 1pam A:1-406 [28740]
        Other proteins in same PDB: d1pama1, d1pama2, d1pama3, d1pamb1, d1pamb2, d1pamb3
        complexed with ca
      2. 2081764Domain d1pamb4: 1pam B:1-406 [28741]
        Other proteins in same PDB: d1pama1, d1pama2, d1pama3, d1pamb1, d1pamb2, d1pamb3
        complexed with ca
    5. Domains for 1v3j:
      1. 2081773Domain d1v3ja4: 1v3j A:1-406 [108308]
        Other proteins in same PDB: d1v3ja1, d1v3ja2, d1v3ja3, d1v3jb1, d1v3jb2, d1v3jb3
        complexed with ca; mutant
      2. 2081774Domain d1v3jb4: 1v3j B:1-406 [108312]
        Other proteins in same PDB: d1v3ja1, d1v3ja2, d1v3ja3, d1v3jb1, d1v3jb2, d1v3jb3
        complexed with ca; mutant
    6. Domains for 1v3k:
      1. 2081767Domain d1v3ka4: 1v3k A:1-406 [108316]
        Other proteins in same PDB: d1v3ka1, d1v3ka2, d1v3ka3, d1v3kb1, d1v3kb2, d1v3kb3
        complexed with ca; mutant
      2. 2081768Domain d1v3kb4: 1v3k B:1-406 [108320]
        Other proteins in same PDB: d1v3ka1, d1v3ka2, d1v3ka3, d1v3kb1, d1v3kb2, d1v3kb3
        complexed with ca; mutant
    7. Domains for 1v3l:
      1. 2081777Domain d1v3la4: 1v3l A:1-406 [108324]
        Other proteins in same PDB: d1v3la1, d1v3la2, d1v3la3, d1v3lb1, d1v3lb2, d1v3lb3
        complexed with ca; mutant
      2. 2081778Domain d1v3lb4: 1v3l B:1-406 [108328]
        Other proteins in same PDB: d1v3la1, d1v3la2, d1v3la3, d1v3lb1, d1v3lb2, d1v3lb3
        complexed with ca; mutant
    8. Domains for 1v3m:
      1. 2081771Domain d1v3ma4: 1v3m A:1-406 [108332]
        Other proteins in same PDB: d1v3ma1, d1v3ma2, d1v3ma3, d1v3mb1, d1v3mb2, d1v3mb3
        complexed with ca, gal, glc; mutant
      2. 2081772Domain d1v3mb4: 1v3m B:1-406 [108336]
        Other proteins in same PDB: d1v3ma1, d1v3ma2, d1v3ma3, d1v3mb1, d1v3mb2, d1v3mb3
        complexed with ca, gal, glc; mutant
  3. 2081779Bacillus stearothermophilus [TaxId:1422] [51454] (1 PDB entry)
  4. 2081781Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId:1422] [51455] (2 PDB entries)
    1. Domain for 1qho:
    2. Domain for 1qhp:
  5. 2081784Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId:33950] [51457] (4 PDB entries)
    1. Domain for 1a47:
    2. Domain for 1ciu:
    3. Domain for 3bmv:
    4. Domain for 3bmw:

More info for Protein Cyclodextrin glycosyltransferase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Cyclodextrin glycosyltransferase from c.1.8.1: Amylase, catalytic domain: