Lineage for d1v3lb2 (1v3l B:583-686)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.3: Prealbumin-like [49451] (8 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. Superfamily b.3.1: Starch-binding domain-like [49452] (4 families) (S)
  5. Family b.3.1.1: Starch-binding domain [49453] (3 proteins)
    automatically mapped to Pfam PF00686
  6. Protein Cyclodextrin glycosyltransferase, C-terminal domain [49454] (5 species)
    this domain is the last one in the protein chain
  7. Species Bacillus sp., strain 1011 [TaxId:1409] [49458] (8 PDB entries)
    Uniprot P05618
  8. Domain d1v3lb2: 1v3l B:583-686 [108326]
    Other proteins in same PDB: d1v3la1, d1v3la3, d1v3la4, d1v3lb1, d1v3lb3, d1v3lb4
    complexed with aci, ca, glc; mutant

Details for d1v3lb2

PDB Entry: 1v3l (more details), 2.1 Å

PDB Description: crystal structure of f283l mutant cyclodextrin glycosyltransferase complexed with a pseudo-tetraose derived from acarbose
PDB Compounds: (B:) cyclomaltodextrin glucanotransferase

SCOPe Domain Sequences for d1v3lb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1v3lb2 b.3.1.1 (B:583-686) Cyclodextrin glycosyltransferase, C-terminal domain {Bacillus sp., strain 1011 [TaxId: 1409]}
tgdqvtvrfvinnattalgqnvfltgnvselgnwdpnnaigpmynqvvyqyptwyydvsv
pagqtiefkflkkqgstvtwegganrtfttptsgtatvnvnwqp

SCOPe Domain Coordinates for d1v3lb2 are not available.

Timeline for d1v3lb2:

View in 3D
Domains from same chain:
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d1v3lb1, d1v3lb3, d1v3lb4
View in 3D
Domains from other chains:
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d1v3la1, d1v3la2, d1v3la3, d1v3la4