SCOPe 2.08: Protein: Animal alpha-amylase

Lineage for Protein: Animal alpha-amylase

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
folded sheet; greek-key
Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families)
this domain is C-terminal to the catalytic beta/alpha barrel domain
Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain [51012] (22 proteins)
this domain follows the catalytic beta/alpha barrel domain
Protein Animal alpha-amylase [51024] (3 species)

Species:

Human (Homo sapiens) [TaxId:9606] [51026] (55 PDB entries)
Uniprot P04746 16-511 ! SQ 04746
1. Domain for 1b2y:
  - Domain d1b2ya1: 1b2y A:404-496 [27772]
    Other proteins in same PDB: d1b2ya2
    complexed with ca, cl, pca
2. Domain for 1bsi:
  - Domain d1bsia1: 1bsi A:404-496 [27770]
    Other proteins in same PDB: d1bsia2, d1bsia3
    complexed with ca, cl, nag
3. Domain for 1c8q:
  - Domain d1c8qa1: 1c8q A:404-496 [59087]
    Other proteins in same PDB: d1c8qa2
    complexed with ca, cl
4. Domain for 1cpu:
  - Domain d1cpua1: 1cpu A:404-496 [27771]
    Other proteins in same PDB: d1cpua2
    complexed with ca, cl, hmc, nag
5. Domain for 1hny:
  - Domain d1hnya1: 1hny A:404-496 [27769]
    Other proteins in same PDB: d1hnya2, d1hnya3
    complexed with ca, cl
6. Domain for 1jxj:
  - Domain d1jxja1: 1jxj A:404-496 [63314]
    Other proteins in same PDB: d1jxja2
    complexed with ca, cl
7. Domain for 1jxk:
  - Domain d1jxka1: 1jxk A:404-491 [63316]
    Other proteins in same PDB: d1jxka2
    complexed with ca, cl
8. Domain for 1kb3:
  - Domain d1kb3a1: 1kb3 A:404-496 [72269]
    Other proteins in same PDB: d1kb3a2
    complexed with ca, nag
9. Domain for 1kbb:
  - Domain d1kbba1: 1kbb A:404-496 [72275]
    Other proteins in same PDB: d1kbba2
    complexed with ca, cl; mutant
10. Domain for 1kbk:
  - Domain d1kbka1: 1kbk A:404-496 [72282]
    Other proteins in same PDB: d1kbka2
    complexed with ca, cl, nag; mutant
11. Domain for 1kgu:
  - Domain d1kgua1: 1kgu A:404-496 [68598]
    Other proteins in same PDB: d1kgua2
    complexed with ca
12. Domain for 1kgw:
  - Domain d1kgwa1: 1kgw A:404-496 [68600]
    Other proteins in same PDB: d1kgwa2
    complexed with ca, nag
13. Domain for 1kgx:
  - Domain d1kgxa1: 1kgx A:404-496 [68602]
    Other proteins in same PDB: d1kgxa2
    complexed with ca, nag
14. Domain for 1mfu:
  - Domain d1mfua1: 1mfu A:404-491 [79047]
    Other proteins in same PDB: d1mfua2
    complexed with ca, cl, glc, hmc; mutant
15. Domain for 1mfv:
  - Domain d1mfva1: 1mfv A:404-496 [79049]
    Other proteins in same PDB: d1mfva2, d1mfva3
    complexed with ca, cl, hmc
16. Domain for 1nm9:
  - Domain d1nm9a1: 1nm9 A:404-496 [91974]
    Other proteins in same PDB: d1nm9a2
    complexed with ca, cl, glc, hmc; mutant
17. Domain for 1q4n:
  - Domain d1q4nx1: 1q4n X:404-496 [95807]
    Other proteins in same PDB: d1q4nx2
    complexed with ca, cl, tam
18. Domain for 1smd:
  - Domain d1smda1: 1smd A:404-496 [27768]
    Other proteins in same PDB: d1smda2, d1smda3
    complexed with ca, cl
19. Domain for 1u2y:
  - Domain d1u2ya1: 1u2y A:404-496 [107624]
    Other proteins in same PDB: d1u2ya2
    complexed with ca, cl, gox, nag
20. Domain for 1u30:
  - Domain d1u30a1: 1u30 A:404-496 [107629]
    Other proteins in same PDB: d1u30a2
    complexed with ca, cl, gox, lag, nag
21. Domain for 1u33:
  - Domain d1u33a1: 1u33 A:404-496 [107632]
    Other proteins in same PDB: d1u33a2
    complexed with ca, cl, lm2, nag
22. Domain for 1xcw:
  - Domain d1xcwa1: 1xcw A:404-496 [115134]
    Other proteins in same PDB: d1xcwa2
    complexed with ca, cl, nag
23. Domain for 1xcx:
  - Domain d1xcxa1: 1xcx A:404-496 [115136]
    Other proteins in same PDB: d1xcxa2
    complexed with ca, cl, nag
24. Domain for 1xd0:
  - Domain d1xd0a1: 1xd0 A:404-496 [115138]
    Other proteins in same PDB: d1xd0a2
    complexed with are, ca, cl, nag
25. Domain for 1xd1:
  - Domain d1xd1a1: 1xd1 A:404-496 [115140]
    Other proteins in same PDB: d1xd1a2
    complexed with 6sa, ca, cl, nag
26. Domain for 1z32:
  - Domain d1z32x1: 1z32 X:409-496 [124394]
    Other proteins in same PDB: d1z32x2
    automated match to d1jxka1
    complexed with agl, ca, cl, glc, hmc
27. Domain for 2cpu:
  - Domain d2cpua1: 2cpu A:404-496 [63334]
    Other proteins in same PDB: d2cpua2
    complexed with ca, cl
28. Domain for 2qmk:
  - Domain d2qmka1: 2qmk A:404-496 [150884]
    Other proteins in same PDB: d2qmka2
    automated match to d1hnya1
    complexed with ca, nag, no2
29. Domain for 2qv4:
  - Domain d2qv4a1: 2qv4 A:404-496 [151384]
    Other proteins in same PDB: d2qv4a2
    automated match to d1hnya1
    complexed with ca, nag, no2, qv4
30. Domain for 3bai:
  - Domain d3baia1: 3bai A:404-496 [155030]
    Other proteins in same PDB: d3baia2
    automated match to d1hnya1
    complexed with ca, nag, no3
31. Domain for 3baj:
  - Domain d3baja1: 3baj A:404-496 [155032]
    Other proteins in same PDB: d3baja2
    automated match to d1hnya1
    complexed with are, ca, nag, no3
32. Domain for 3bak:
  - Domain d3baka1: 3bak A:409-496 [155034]
    Other proteins in same PDB: d3baka2
    automated match to d1jxka1
    complexed with ca, nag, no3; mutant
33. Domain for 3baw:
  - Domain d3bawa1: 3baw A:404-496 [155039]
    Other proteins in same PDB: d3bawa2
    automated match to d1hnya1
    complexed with azi, ca, cl, na, nag
34. Domain for 3bax:
  - Domain d3baxa1: 3bax A:409-496 [155041]
    Other proteins in same PDB: d3baxa2
    automated match to d1jxka1
    complexed with azi, ca, cl, na, nag
35. Domain for 3bay:
  - Domain d3baya1: 3bay A:409-496 [155043]
    Other proteins in same PDB: d3baya2
    automated match to d1jxka1
    complexed with are, ca, nag, no3
36. Domain for 3blk:
  - Domain d3blka2: 3blk A:404-496 [208656]
    Other proteins in same PDB: d3blka1
    automated match to d1jfha1
    complexed with ca, cl, hmc
37. Domain for 3blp:
  - Domain d3blpx2: 3blp X:404-496 [208658]
    Other proteins in same PDB: d3blpx1
    automated match to d1jfha1
    complexed with ca, cl, hmc
38. Domain for 3cpu:
  - Domain d3cpua1: 3cpu A:404-496 [63336]
    Other proteins in same PDB: d3cpua2
    complexed with ca, cl
39. Domain for 3ij7:
  - Domain d3ij7a2: 3ij7 A:404-496 [211718]
    Other proteins in same PDB: d3ij7a1
    automated match to d1hnya1
    complexed with ca, cl
40. Domain for 3ij8:
  - Domain d3ij8a2: 3ij8 A:404-496 [211720]
    Other proteins in same PDB: d3ij8a1
    automated match to d1hnya1
    complexed with b0d, b9d, ca, cl
41. Domain for 3ij9:
  - Domain d3ij9a2: 3ij9 A:404-496 [211722]
    Other proteins in same PDB: d3ij9a1
    automated match to d1hnya1
    complexed with b0d, ca, cl
42. Domain for 3old:
  - Domain d3olda2: 3old A:404-496 [214429]
    Other proteins in same PDB: d3olda1
    automated match to d1jfha1
    complexed with aci, ca, cl, mpd, nag, pca, so4
43. Domain for 3ole:
  - Domain d3olea2: 3ole A:404-496 [214431]
    Other proteins in same PDB: d3olea1
    automated match to d1jfha1
    complexed with aci, ca, cl, mpd, nag, pca, so4
44. Domain for 3olg:
  - Domain d3olga2: 3olg A:404-496 [214433]
    Other proteins in same PDB: d3olga1
    automated match to d1jfha1
    complexed with ca, cl, glc, hsd, pca, so4
45. Domain for 3oli:
  - Domain d3olia2: 3oli A:404-496 [214437]
    Other proteins in same PDB: d3olia1
    automated match to d1jfha1
    complexed with bgc, ca, cl, hsd, mpd, pca, so4
46. Domain for 4gqq:
  - Domain d4gqqa2: 4gqq A:404-496 [222091]
    Other proteins in same PDB: d4gqqa1
    automated match to d1hnya1
    complexed with 0xr, ca, cl, nag
47. Domain for 4gqr:
  - Domain d4gqra2: 4gqr A:404-496 [222093]
    Other proteins in same PDB: d4gqra1
    automated match to d1hnya1
    complexed with ca, cl, myc, nag
48. Domain for 4w93:
  - Domain d4w93a2: 4w93 A:404-496 [274978]
    Other proteins in same PDB: d4w93a1
    automated match to d1hnya1
    complexed with 3l9, ca, cl
49. Domain for 4x9y:
  - Domain d4x9ya2: 4x9y A:404-496 [269162]
    Other proteins in same PDB: d4x9ya1
    automated match to d1hnya1
    complexed with ca, cl
50. Domain for 5e0f:
  - Domain d5e0fa2: 5e0f A:404-496 [322163]
    Other proteins in same PDB: d5e0fa1
    automated match to d1hnya1
    complexed with 5j7, ca, cl
51. Domain for 5emy:
  - Domain d5emya2: 5emy A:404-496 [319261]
    Other proteins in same PDB: d5emya1
    automated match to d1hnya1
    complexed with 5qp, ca, cl
52. Domain for 5td4:
  - Domain d5td4a2: 5td4 A:404-496 [324742]
    Other proteins in same PDB: d5td4a1
    automated match to d2cpua1
    complexed with ca, cl
53. Domain for 5u3a:
  - Domain d5u3aa2: 5u3a A:404-496 [342404]
    Other proteins in same PDB: d5u3aa1
    automated match to d1hnya1
    complexed with ca, cl, nag
54. Domain for 6obx:
  - Domain d6obxa2: 6obx A:404-496 [380489]
    Other proteins in same PDB: d6obxa1
    automated match to d1hnya1
    complexed with ca, cl, mpd, nag, zxu
55. Domain for 6ocn:
  - Domain d6ocna2: 6ocn A:404-496 [380429]
    Other proteins in same PDB: d6ocna1
    automated match to d1hnya1
    complexed with ca, cl, nag, zxy
Pig (Sus scrofa) [TaxId:9823] [51025] (13 PDB entries)
1. Domain for 1bvn:
  - Domain d1bvnp1: 1bvn P:404-496 [27767]
    Other proteins in same PDB: d1bvnp2, d1bvnt_
    complexed with ca, cl
2. Domain for 1dhk:
  - Domain d1dhka1: 1dhk A:404-496 [27761]
    Other proteins in same PDB: d1dhka2, d1dhkb_
    complexed with ca, cl, nag
3. Domain for 1hx0:
  - Domain d1hx0a1: 1hx0 A:404-496 [61346]
    Other proteins in same PDB: d1hx0a2
    complexed with ca, cl, edo
4. Domain for 1jfh:
  - Domain d1jfha1: 1jfh A:404-496 [27762]
    Other proteins in same PDB: d1jfha2
    complexed with ca, cl, hg
5. Domains for 1kxq:
  1. Domain d1kxqa1: 1kxq A:404-496 [73163]
    Other proteins in same PDB: d1kxqa2, d1kxqb2, d1kxqc2, d1kxqd2, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
    complexed with ca, cl
  2. Domain d1kxqb1: 1kxq B:404-496 [73165]
    Other proteins in same PDB: d1kxqa2, d1kxqb2, d1kxqc2, d1kxqd2, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
    complexed with ca, cl
  3. Domain d1kxqc1: 1kxq C:404-496 [73167]
    Other proteins in same PDB: d1kxqa2, d1kxqb2, d1kxqc2, d1kxqd2, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
    complexed with ca, cl
  4. Domain d1kxqd1: 1kxq D:404-496 [73169]
    Other proteins in same PDB: d1kxqa2, d1kxqb2, d1kxqc2, d1kxqd2, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
    complexed with ca, cl
6. Domains for 1kxt:
  1. Domain d1kxta1: 1kxt A:404-496 [73177]
    Other proteins in same PDB: d1kxta2, d1kxtb_, d1kxtc2, d1kxtd_, d1kxte2, d1kxtf_
    complexed with ca, cl
  2. Domain d1kxtc1: 1kxt C:404-496 [73180]
    Other proteins in same PDB: d1kxta2, d1kxtb_, d1kxtc2, d1kxtd_, d1kxte2, d1kxtf_
    complexed with ca, cl
  3. Domain d1kxte1: 1kxt E:404-496 [73183]
    Other proteins in same PDB: d1kxta2, d1kxtb_, d1kxtc2, d1kxtd_, d1kxte2, d1kxtf_
    complexed with ca, cl
7. Domains for 1kxv:
  1. Domain d1kxva1: 1kxv A:404-496 [73186]
    Other proteins in same PDB: d1kxva2, d1kxvb2, d1kxvc_, d1kxvd_
  2. Domain d1kxvb1: 1kxv B:404-496 [73188]
    Other proteins in same PDB: d1kxva2, d1kxvb2, d1kxvc_, d1kxvd_
8. Domain for 1ose:
  - Domain d1osea1: 1ose A:404-496 [27766]
    Other proteins in same PDB: d1osea2
    complexed with bgc, ca, cl
9. Domain for 1pif:
  - Domain d1pifa1: 1pif A:404-496 [27765]
    Other proteins in same PDB: d1pifa2
    complexed with ca, cl
10. Domain for 1pig:
  - Domain d1piga1: 1pig A:404-496 [27764]
    Other proteins in same PDB: d1piga2
    complexed with bgc, ca, cl, hmc
11. Domain for 1ppi:
  - Domain d1ppia1: 1ppi A:404-496 [27763]
    Other proteins in same PDB: d1ppia2
    complexed with ca, cl
12. Domain for 1ua3:
  - Domain d1ua3a1: 1ua3 A:404-496 [99126]
    Other proteins in same PDB: d1ua3a2
    complexed with bgc, ca, cl, edo
13. Domain for 1wo2:
  - Domain d1wo2a1: 1wo2 A:404-496 [121108]
    Other proteins in same PDB: d1wo2a2
    automated match to d1hx0a1
    complexed with ca, cl, edo
Yellow mealworm (Tenebrio molitor), larva [TaxId:7067] [51027] (4 PDB entries)
1. Domain for 1clv:
  - Domain d1clva1: 1clv A:379-471 [27774]
    Other proteins in same PDB: d1clva2, d1clvi_
    complexed with ca, cl
2. Domain for 1jae:
  - Domain d1jaea1: 1jae A:379-471 [27773]
    Other proteins in same PDB: d1jaea2
    complexed with ca, cl
3. Domain for 1tmq:
  - Domain d1tmqa1: 1tmq A:379-471 [27775]
    Other proteins in same PDB: d1tmqa2, d1tmqb_
    complexed with ca, cl
4. Domain for 1viw:
  - Domain d1viwa1: 1viw A:379-471 [27776]
    Other proteins in same PDB: d1viwa2, d1viwb_
    complexed with ca, cl

More info for Protein Animal alpha-amylase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain

Timeline for Protein Animal alpha-amylase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain:

Protein Animal alpha-amylase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain first appeared (with stable ids) in SCOP 1.55
Protein Animal alpha-amylase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain appears in SCOPe 2.07