Lineage for d1xd1a2 (1xd1 A:1-403)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081537Protein Animal alpha-amylase [51458] (3 species)
    contains Ca2+-binding subdomain, residues 100-170
  7. 2081538Species Human (Homo sapiens) [TaxId:9606] [51460] (51 PDB entries)
    Uniprot P04746 16-511 ! SQ 04746
  8. 2081581Domain d1xd1a2: 1xd1 A:1-403 [115141]
    Other proteins in same PDB: d1xd1a1
    complexed with 6sa, ca, cl, nag

Details for d1xd1a2

PDB Entry: 1xd1 (more details), 2.2 Å

PDB Description: Acarbose Rearrangement Mechanism Implied by the Kinetic and Structural Analysis of Human Pancreatic alpha-Amylase in Complex with Analogues and Their Elongated Counterparts
PDB Compounds: (A:) alpha-amylase

SCOPe Domain Sequences for d1xd1a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1xd1a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d1xd1a2:

Click to download the PDB-style file with coordinates for d1xd1a2.
(The format of our PDB-style files is described here.)

Timeline for d1xd1a2:

View in 3D
Domains from same chain:
(mouse over for more information)