SCOPe 2.08: Domain d1jfha2: 1jfh A:1-403

Lineage for d1jfha2 (1jfh A:1-403)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Animal alpha-amylase [51458] (3 species)
   contains Ca2+-binding subdomain, residues 100-170

7. Species Pig (Sus scrofa) [TaxId:9823] [51459] (13 PDB entries)

8. Domain d1jfha2: 1jfh A:1-403 [28749]
   Other proteins in same PDB: d1jfha1
   complexed with ca, cl, hg
   has additional subdomain(s) that are not in the common domain

Details for d1jfha2

PDB Entry: 1jfh, 2.03 Å

PDB Description: structure of a pancreatic alpha-amylase bound to a substrate analogue at 2.03 angstrom resolution

PDB Compounds: (A:) alpha-amylase

SCOPe Domain Sequences for d1jfha2:

Sequence; same for both SEQRES and ATOM records:

>d1jfha2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
eyapqtqsgrtsivhlfewrwvdialecerylgpkgfggvqvsppnenvvvtnpsrpwwe
ryqpvsyklctrsgnenefrdmvtrcnnvgvriyvdavinhmcgsgaaagtgttcgsycn
pgsrefpavpysawdfndgkcktasggiesyndpyqvrdcqlvglldlalekdyvrsmia
dylnklidigvagfridaskhmwpgdikavldklhnlntnwfpagsrpfifqevidlgge
aiksseyfgngrvtefkygaklgtvvrkwsgekmsylknwgegwgfmpsdralvfvdnhd
nqrghgaggssiltfwdarlykiavgfmlahpygftrvmssyrwarnfvngedvndwigp
pnnngvikevtinadttcgndwvcehrwreirnmvwfrnvvdg

Timeline for d1jfha2:

• d1jfha2 first appeared (with stable ids) in SCOP 1.55, called d1jfh_2
  
• d1jfha2 appears in SCOPe 2.07