SCOPe 2.08: Protein: Enolase

Lineage for Protein: Enolase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)

(S)

binds metal ion (magnesium or manganese) in conserved site inside barrel
N-terminal alpha+beta domain is common to this superfamily

Family c.1.11.1: Enolase [51605] (2 proteins)
automatically mapped to Pfam PF00113
Protein Enolase [51606] (11 species)
Fold of this protein slightly differs from common fold in topology

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51607] (16 PDB entries)
1. Domains for 1ebg:
  1. Domain d1ebga1: 1ebg A:142-436 [29209]
    Other proteins in same PDB: d1ebga2, d1ebgb2
    complexed with mg, pah
  2. Domain d1ebgb1: 1ebg B:142-436 [29210]
    Other proteins in same PDB: d1ebga2, d1ebgb2
    complexed with mg, pah
2. Domains for 1ebh:
  1. Domain d1ebha1: 1ebh A:142-436 [29205]
    Other proteins in same PDB: d1ebha2, d1ebhb2
    complexed with cl, mg
  2. Domain d1ebhb1: 1ebh B:142-436 [29206]
    Other proteins in same PDB: d1ebha2, d1ebhb2
    complexed with cl, mg
3. Domain for 1els:
  - Domain d1elsa1: 1els A:142-436 [29213]
    Other proteins in same PDB: d1elsa2
    complexed with mn, pah
4. Domains for 1l8p:
  1. Domain d1l8pa1: 1l8p A:142-436 [73692]
    Other proteins in same PDB: d1l8pa2, d1l8pb2, d1l8pc2, d1l8pd2
    complexed with mg, pah
  2. Domain d1l8pb1: 1l8p B:642-936 [73694]
    Other proteins in same PDB: d1l8pa2, d1l8pb2, d1l8pc2, d1l8pd2
    complexed with mg, pah
  3. Domain d1l8pc1: 1l8p C:1142-1436 [73696]
    Other proteins in same PDB: d1l8pa2, d1l8pb2, d1l8pc2, d1l8pd2
    complexed with mg, pah
  4. Domain d1l8pd1: 1l8p D:1642-1936 [73698]
    Other proteins in same PDB: d1l8pa2, d1l8pb2, d1l8pc2, d1l8pd2
    complexed with mg, pah
5. Domain for 1nel:
  - Domain d1nela1: 1nel A:142-436 [29214]
    Other proteins in same PDB: d1nela2
    complexed with f, mg, po4
6. Domains for 1one:
  1. Domain d1onea1: 1one A:142-436 [29200]
    Other proteins in same PDB: d1onea2, d1oneb2
    complexed with mg, pep
  2. Domain d1oneb1: 1one B:142-436 [29201]
    Other proteins in same PDB: d1onea2, d1oneb2
    complexed with mg, pep
7. Domains for 1p43:
  1. Domain d1p43a1: 1p43 A:142-436 [94072]
    Other proteins in same PDB: d1p43a2, d1p43b2
    complexed with 2pg, mg
  2. Domain d1p43b1: 1p43 B:642-936 [94074]
    Other proteins in same PDB: d1p43a2, d1p43b2
    complexed with 2pg, mg
8. Domains for 1p48:
  1. Domain d1p48a1: 1p48 A:142-436 [94085]
    Other proteins in same PDB: d1p48a2, d1p48b2
    complexed with mg, pep
  2. Domain d1p48b1: 1p48 B:642-936 [94087]
    Other proteins in same PDB: d1p48a2, d1p48b2
    complexed with mg, pep
9. Domains for 2al1:
  1. Domain d2al1a1: 2al1 A:142-436 [126949]
    Other proteins in same PDB: d2al1a2, d2al1b2
    automated match to d1onea1
    complexed with 2pg, cl, k, mg, pep
  2. Domain d2al1b1: 2al1 B:142-436 [126951]
    Other proteins in same PDB: d2al1a2, d2al1b2
    automated match to d1onea1
    complexed with 2pg, cl, k, mg, pep
10. Domains for 2al2:
  1. Domain d2al2a1: 2al2 A:142-436 [126953]
    Other proteins in same PDB: d2al2a2, d2al2b2
    automated match to d2al1a1
    complexed with 2pg, cl, k, mg, pep
  2. Domain d2al2b1: 2al2 B:142-436 [126955]
    Other proteins in same PDB: d2al2a2, d2al2b2
    automated match to d2al1a1
    complexed with 2pg, cl, k, mg, pep
11. Domains for 2one:
  1. Domain d2onea1: 2one A:142-436 [29203]
    Other proteins in same PDB: d2onea2, d2oneb2
    complexed with 2pg, li, mg, pep
  2. Domain d2oneb1: 2one B:142-436 [29204]
    Other proteins in same PDB: d2onea2, d2oneb2
    complexed with 2pg, li, mg, pep
12. Domain for 3enl:
  - Domain d3enla1: 3enl A:142-436 [29211]
    Other proteins in same PDB: d3enla2
    complexed with so4
13. Domain for 4enl:
  - Domain d4enla1: 4enl A:142-436 [29202]
    Other proteins in same PDB: d4enla2
    complexed with so4, zn
14. Domain for 5enl:
  - Domain d5enla1: 5enl A:142-436 [29207]
    Other proteins in same PDB: d5enla2
    complexed with 2pg, ca
15. Domain for 6enl:
  - Domain d6enla1: 6enl A:142-436 [29208]
    Other proteins in same PDB: d6enla2
    complexed with pga, zn
16. Domain for 7enl:
  - Domain d7enla1: 7enl A:142-436 [29212]
    Other proteins in same PDB: d7enla2
    complexed with 2pg, mg
Enterococcus hirae [TaxId:1354] [89498] (1 PDB entry)
- Domains for 1iyx:
  1. Domain d1iyxa1: 1iyx A:137-431 [83815]
    Other proteins in same PDB: d1iyxa2, d1iyxb2
    complexed with gol, mg, so4
  2. Domain d1iyxb1: 1iyx B:137-431 [83817]
    Other proteins in same PDB: d1iyxa2, d1iyxb2
    complexed with gol, mg, so4

Escherichia coli [TaxId:562] [69396] (3 PDB entries)

Domains for 1e9i:
1. Domain d1e9ia1: 1e9i A:140-430 [64818]
  Other proteins in same PDB: d1e9ia2, d1e9ib2, d1e9ic2, d1e9id2
  CASP4
  complexed with mg, so4
2. Domain d1e9ib1: 1e9i B:140-430 [64820]
  Other proteins in same PDB: d1e9ia2, d1e9ib2, d1e9ic2, d1e9id2
  CASP4
  complexed with mg, so4
3. Domain d1e9ic1: 1e9i C:140-428 [64822]
  Other proteins in same PDB: d1e9ia2, d1e9ib2, d1e9ic2, d1e9id2
  CASP4
  complexed with mg, so4
4. Domain d1e9id1: 1e9i D:140-431 [64824]
  Other proteins in same PDB: d1e9ia2, d1e9ib2, d1e9ic2, d1e9id2
  CASP4
  complexed with mg, so4
Domains for 2fym:
1. Domain d2fyma1: 2fym A:140-431 [134379]
  Other proteins in same PDB: d2fyma2, d2fymc2, d2fymd2, d2fymf2
  automatically matched to d1e9id1
  protein/RNA complex; complexed with mg
2. Domain d2fymc1: 2fym C:140-430 [134381]
  Other proteins in same PDB: d2fyma2, d2fymc2, d2fymd2, d2fymf2
  automatically matched to d1e9id1
  protein/RNA complex; complexed with mg
3. Domain d2fymd1: 2fym D:140-430 [134383]
  Other proteins in same PDB: d2fyma2, d2fymc2, d2fymd2, d2fymf2
  automatically matched to d1e9id1
  protein/RNA complex; complexed with mg
4. Domain d2fymf1: 2fym F:140-431 [134385]
  Other proteins in same PDB: d2fyma2, d2fymc2, d2fymd2, d2fymf2
  automatically matched to d1e9id1
  protein/RNA complex; complexed with mg

Domains for 6d3q:

Domain d6d3qa2: 6d3q A:140-430 [377221]
Other proteins in same PDB: d6d3qa1, d6d3qa3, d6d3qb1, d6d3qb3, d6d3qc1, d6d3qc3, d6d3qd1, d6d3qd3, d6d3qe1, d6d3qe3, d6d3qf1, d6d3qf3
automated match to d2fymc1
complexed with 4ng, gol, mg, so4

Domain d6d3qb2: 6d3q B:140-430 [377214]
Other proteins in same PDB: d6d3qa1, d6d3qa3, d6d3qb1, d6d3qb3, d6d3qc1, d6d3qc3, d6d3qd1, d6d3qd3, d6d3qe1, d6d3qe3, d6d3qf1, d6d3qf3
automated match to d2fymc1
complexed with 4ng, gol, mg, so4

Domain d6d3qc2: 6d3q C:140-431 [377220]
Other proteins in same PDB: d6d3qa1, d6d3qa3, d6d3qb1, d6d3qb3, d6d3qc1, d6d3qc3, d6d3qd1, d6d3qd3, d6d3qe1, d6d3qe3, d6d3qf1, d6d3qf3
automated match to d2fymc1
complexed with 4ng, gol, mg, so4

Domain d6d3qd2: 6d3q D:140-431 [377217]
Other proteins in same PDB: d6d3qa1, d6d3qa3, d6d3qb1, d6d3qb3, d6d3qc1, d6d3qc3, d6d3qd1, d6d3qd3, d6d3qe1, d6d3qe3, d6d3qf1, d6d3qf3
automated match to d2fymc1
complexed with 4ng, gol, mg, so4

Domain d6d3qe2: 6d3q E:140-431 [377215]
Other proteins in same PDB: d6d3qa1, d6d3qa3, d6d3qb1, d6d3qb3, d6d3qc1, d6d3qc3, d6d3qd1, d6d3qd3, d6d3qe1, d6d3qe3, d6d3qf1, d6d3qf3
automated match to d2fymc1
complexed with 4ng, gol, mg, so4

Domain d6d3qf2: 6d3q F:140-431 [377216]
Other proteins in same PDB: d6d3qa1, d6d3qa3, d6d3qb1, d6d3qb3, d6d3qc1, d6d3qc3, d6d3qd1, d6d3qd3, d6d3qe1, d6d3qe3, d6d3qf1, d6d3qf3
automated match to d2fymc1
complexed with 4ng, gol, mg, so4

European lobster (Homarus vulgaris) [TaxId:6707] [51608] (2 PDB entries)
1. Domain for 1pdy:
  - Domain d1pdya1: 1pdy A:140-433 [29216]
    Other proteins in same PDB: d1pdya2
    complexed with so4
2. Domain for 1pdz:
  - Domain d1pdza1: 1pdz A:140-433 [29215]
    Other proteins in same PDB: d1pdza2
    complexed with mn, pga

Human (Homo sapiens), gamma isoform [TaxId:9606] [110371] (15 PDB entries)
Uniprot P09104

Domains for 1te6:
1. Domain d1te6a1: 1te6 A:140-433 [106797]
  Other proteins in same PDB: d1te6a2, d1te6a3, d1te6b2
  complexed with cl, mg, po4, trs
2. Domain d1te6b1: 1te6 B:140-433 [106799]
  Other proteins in same PDB: d1te6a2, d1te6a3, d1te6b2
  complexed with cl, mg, po4, trs
Domains for 2akm:
1. Domain d2akma1: 2akm A:140-433 [126919]
  Other proteins in same PDB: d2akma2, d2akmb2
  automated match to d1te6a1
  complexed with mg, po4, trs
2. Domain d2akmb1: 2akm B:140-432 [126921]
  Other proteins in same PDB: d2akma2, d2akmb2
  automated match to d1te6a1
  complexed with mg, po4, trs
Domains for 2akz:
1. Domain d2akza1: 2akz A:140-433 [126944]
  Other proteins in same PDB: d2akza2, d2akza3, d2akzb2
  automated match to d1te6a1
  complexed with f, mg, po4, trs
2. Domain d2akzb1: 2akz B:1140-1432 [126946]
  Other proteins in same PDB: d2akza2, d2akza3, d2akzb2
  automated match to d1te6a1
  complexed with f, mg, po4, trs
Domains for 3ucc:
1. Domain d3ucca2: 3ucc A:140-433 [217283]
  Other proteins in same PDB: d3ucca1, d3uccb1
  automated match to d1pdza1
  complexed with 2pg, mg, trs
2. Domain d3uccb2: 3ucc B:140-432 [217285]
  Other proteins in same PDB: d3ucca1, d3uccb1
  automated match to d1pdza1
  complexed with 2pg, mg, trs
Domains for 3ucd:
1. Domain d3ucda2: 3ucd A:140-433 [217287]
  Other proteins in same PDB: d3ucda1, d3ucdb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep
2. Domain d3ucdb2: 3ucd B:140-432 [217289]
  Other proteins in same PDB: d3ucda1, d3ucdb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep
Domains for 3uje:
1. Domain d3ujea2: 3uje A:140-433 [217419]
  Other proteins in same PDB: d3ujea1, d3ujeb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep, trs
2. Domain d3ujeb2: 3uje B:140-432 [217421]
  Other proteins in same PDB: d3ujea1, d3ujeb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep, trs
Domains for 3ujf:
1. Domain d3ujfa2: 3ujf A:140-433 [217423]
  Other proteins in same PDB: d3ujfa1, d3ujfb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep
2. Domain d3ujfb2: 3ujf B:140-432 [217425]
  Other proteins in same PDB: d3ujfa1, d3ujfb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep
Domains for 3ujr:
1. Domain d3ujra2: 3ujr A:140-433 [217430]
  Other proteins in same PDB: d3ujra1, d3ujrb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep, trs
2. Domain d3ujrb2: 3ujr B:140-432 [217432]
  Other proteins in same PDB: d3ujra1, d3ujrb1
  automated match to d1pdza1
  complexed with 2pg, mg, pep, trs
Domains for 3ujs:
1. Domain d3ujsa2: 3ujs A:140-433 [217434]
  Other proteins in same PDB: d3ujsa1, d3ujsb1
  automated match to d1pdza1
  complexed with 0v5, mg, trs, xsp
2. Domain d3ujsb2: 3ujs B:140-433 [217436]
  Other proteins in same PDB: d3ujsa1, d3ujsb1
  automated match to d1pdza1
  complexed with 0v5, mg, trs, xsp
Domains for 4za0:
1. Domain d4za0a2: 4za0 A:141-434 [316474]
  Other proteins in same PDB: d4za0a1, d4za0b1
  automated match to d2akza1
  complexed with mg, pah
2. Domain d4za0b2: 4za0 B:141-432 [316519]
  Other proteins in same PDB: d4za0a1, d4za0b1
  automated match to d2akza1
  complexed with mg, pah
Domains for 4zcw:
1. Domain d4zcwa2: 4zcw A:141-434 [319824]
  Other proteins in same PDB: d4zcwa1, d4zcwb1
  automated match to d2akza1
  complexed with 4ng, mg
2. Domain d4zcwb2: 4zcw B:141-434 [319827]
  Other proteins in same PDB: d4zcwa1, d4zcwb1
  automated match to d2akza1
  complexed with 4ng, mg

Domains for 5eu9:

Domain d5eu9a2: 5eu9 A:141-434 [326390]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9b2: 5eu9 B:141-434 [326401]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9c2: 5eu9 C:141-434 [326436]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9d2: 5eu9 D:141-434 [326456]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9e2: 5eu9 E:141-434 [326587]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9f2: 5eu9 F:141-434 [326460]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9g2: 5eu9 G:141-434 [326523]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domain d5eu9h2: 5eu9 H:141-434 [326527]
Other proteins in same PDB: d5eu9a1, d5eu9b1, d5eu9c1, d5eu9c3, d5eu9d1, d5eu9e1, d5eu9f1, d5eu9f3, d5eu9g1, d5eu9h1
automated match to d2akza1
complexed with 5tx, mg, pge

Domains for 5idz:
1. Domain d5idza2: 5idz A:141-434 [330023]
  Other proteins in same PDB: d5idza1, d5idza3, d5idzb1
  automated match to d2akza1
  complexed with 6bm, mg, pge
2. Domain d5idzb2: 5idz B:141-434 [330032]
  Other proteins in same PDB: d5idza1, d5idza3, d5idzb1
  automated match to d2akza1
  complexed with 6bm, mg, pge
Domains for 5td9:
1. Domain d5td9a2: 5td9 A:141-434 [339610]
  Other proteins in same PDB: d5td9a1, d5td9b1
  automated match to d2akza1
  complexed with cl, mg
2. Domain d5td9b2: 5td9 B:141-434 [339617]
  Other proteins in same PDB: d5td9a1, d5td9b1
  automated match to d2akza1
  complexed with cl, mg
Domains for 5tij:
1. Domain d5tija2: 5tij A:141-434 [340359]
  Other proteins in same PDB: d5tija1, d5tijb1
  automated match to d2akza1
  complexed with 5tx, mg
2. Domain d5tijb2: 5tij B:141-434 [340311]
  Other proteins in same PDB: d5tija1, d5tijb1
  automated match to d2akza1
  complexed with 5tx, mg

Methanocaldococcus jannaschii [TaxId:2190] [225343] (1 PDB entry)
- Domains for 2pa6:
  1. Domain d2pa6a2: 2pa6 A:147-427 [205484]
    Other proteins in same PDB: d2pa6a1, d2pa6a3, d2pa6b1, d2pa6b3
    automated match to d1pdza1
  2. Domain d2pa6b2: 2pa6 B:147-427 [205486]
    Other proteins in same PDB: d2pa6a1, d2pa6a3, d2pa6b1, d2pa6b3
    automated match to d1pdza1
Mycoplasma hyopneumoniae [TaxId:2099] [419772] (1 PDB entry)
- Domains for 6j36:
  1. Domain d6j36a2: 6j36 A:142-451 [368855]
    Other proteins in same PDB: d6j36a1, d6j36a3, d6j36b1, d6j36b3
    automated match to d4ewja2
    complexed with gol, so4
  2. Domain d6j36b2: 6j36 B:142-451 [368856]
    Other proteins in same PDB: d6j36a1, d6j36a3, d6j36b1, d6j36b3
    automated match to d4ewja2
    complexed with gol, so4
Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [141843] (1 PDB entry)
Uniprot Q8DPS0 138-433
- Domains for 1w6t:
  1. Domain d1w6ta1: 1w6t A:138-433 [120670]
    Other proteins in same PDB: d1w6ta2, d1w6ta3, d1w6tb2, d1w6tb3
    complexed with 2pe, mg
  2. Domain d1w6tb1: 1w6t B:138-433 [120672]
    Other proteins in same PDB: d1w6ta2, d1w6ta3, d1w6tb2, d1w6tb3
    automated match to d1w6ta1
    complexed with 2pe, mg
Staphylococcus aureus [TaxId:1280] [311489] (2 PDB entries)
1. Domains for 5boe:
  1. Domain d5boea2: 5boe A:140-433 [310301]
    Other proteins in same PDB: d5boea1, d5boeb1
    automated match to d1w6ta1
    complexed with gol, mg, pep
  2. Domain d5boeb2: 5boe B:140-433 [310303]
    Other proteins in same PDB: d5boea1, d5boeb1
    automated match to d1w6ta1
    complexed with gol, mg, pep
2. Domains for 5bof:
  1. Domain d5bofa2: 5bof A:140-434 [310305]
    Other proteins in same PDB: d5bofa1, d5bofb1
    automated match to d1w6ta1
    complexed with mg, so4
  2. Domain d5bofb2: 5bof B:140-434 [310307]
    Other proteins in same PDB: d5bofa1, d5bofb1
    automated match to d1w6ta1
    complexed with mg, so4
Trypanosoma brucei brucei [TaxId:5702] [89497] (1 PDB entry)
- Domain for 1oep:
  - Domain d1oepa1: 1oep A:139-429 [86918]
    Other proteins in same PDB: d1oepa2
    complexed with edo, so4, zn
Trypanosome (Trypanosoma brucei) [TaxId:5691] [159415] (6 PDB entries)
1. Domain for 2ptw:
  - Domain d2ptwa1: 2ptw A:139-429 [149838]
    Other proteins in same PDB: d2ptwa2, d2ptwa3
    automated match to d1oepa1
    complexed with edo, so4, zn
2. Domain for 2ptx:
  - Domain d2ptxa1: 2ptx A:139-429 [149840]
    Other proteins in same PDB: d2ptxa2, d2ptxa3
    automated match to d1oepa1
    complexed with edo, so4, zn
3. Domain for 2pty:
  - Domain d2ptya1: 2pty A:139-429 [149842]
    Other proteins in same PDB: d2ptya2, d2ptya3
    automated match to d1oepa1
    complexed with edo, pep, zn
4. Domain for 2ptz:
  - Domain d2ptza1: 2ptz A:139-429 [149844]
    Other proteins in same PDB: d2ptza2, d2ptza3
    automated match to d1oepa1
    complexed with edo, pah, zn
5. Domain for 2pu0:
  - Domain d2pu0a1: 2pu0 A:139-429 [149846]
    Other proteins in same PDB: d2pu0a2, d2pu0a3
    automated match to d1oepa1
    complexed with edo, pah, zn
6. Domain for 2pu1:
  - Domain d2pu1a1: 2pu1 A:139-429 [149848]
    Other proteins in same PDB: d2pu1a2, d2pu1a3
    automated match to d1oepa1
    complexed with edo, fsg, zn

More info for Protein Enolase from c.1.11.1: Enolase

Timeline for Protein Enolase from c.1.11.1: Enolase:

Protein Enolase from c.1.11.1: Enolase first appeared (with stable ids) in SCOP 1.55
Protein Enolase from c.1.11.1: Enolase appears in SCOPe 2.07