SCOPe 2.08: Structural Classification of Proteins

PDB entry 6d3q

View 6d3q on RCSB PDB site
Description: Crystal structure of Escherichia coli enolase complexed with a natural inhibitor SF2312.
Class: LYASE/LYASE inhibitor
Keywords: Enolase, complex, natural inhibitor, SF2312, LYASE, LYASE-LYASE inhibitor complex
Deposited on 2018-04-16, released 2019-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: enolase
Species: Escherichia coli [TaxId:562]
Gene: ENO
Database cross-references and differences (RAF-indexed):
- Uniprot B7MLA0 (7-End)
  - expression tag (0-6)
Domains in SCOPe 2.08: d6d3qa1, d6d3qa2, d6d3qa3
Chain 'B':
Compound: enolase
Species: Escherichia coli [TaxId:562]
Gene: ENO
Database cross-references and differences (RAF-indexed):
- Uniprot B7MLA0 (7-End)
  - expression tag (0-6)
Domains in SCOPe 2.08: d6d3qb1, d6d3qb2, d6d3qb3
Chain 'C':
Compound: enolase
Species: Escherichia coli [TaxId:562]
Gene: ENO
Database cross-references and differences (RAF-indexed):
- Uniprot B7MLA0 (7-438)
  - expression tag (0-6)
Domains in SCOPe 2.08: d6d3qc1, d6d3qc2, d6d3qc3
Chain 'D':
Compound: enolase
Species: Escherichia coli [TaxId:562]
Gene: ENO
Database cross-references and differences (RAF-indexed):
- Uniprot B7MLA0 (7-438)
  - expression tag (0-6)
Domains in SCOPe 2.08: d6d3qd1, d6d3qd2, d6d3qd3
Chain 'E':
Compound: enolase
Species: Escherichia coli [TaxId:562]
Gene: ENO
Database cross-references and differences (RAF-indexed):
- Uniprot B7MLA0 (7-438)
  - expression tag (0-6)
Domains in SCOPe 2.08: d6d3qe1, d6d3qe2, d6d3qe3
Chain 'F':
Compound: enolase
Species: Escherichia coli [TaxId:562]
Gene: ENO
Database cross-references and differences (RAF-indexed):
- Uniprot B7MLA0 (7-438)
  - expression tag (0-6)
Domains in SCOPe 2.08: d6d3qf1, d6d3qf2, d6d3qf3
Heterogens: 4NG, MG, GOL, SO4, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>6d3qA (A:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgqa

Sequence, based on observed residues (ATOM records): (download)

>6d3qA (A:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgq

Chain 'B':
Sequence, based on SEQRES records: (download)

>6d3qB (B:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgqa

Sequence, based on observed residues (ATOM records): (download)

>6d3qB (B:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgq

Chain 'C':
Sequence, based on SEQRES records: (download)

>6d3qC (C:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgqa

Sequence, based on observed residues (ATOM records): (download)

>6d3qC (C:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnftseefthfleeltkqypivsiedglde
sdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetlaa
ikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirieea
lgekapyngrkeikgqa

Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)

>6d3qD (D:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgqa

Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)

>6d3qE (E:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgqa

Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)

>6d3qF (F:)
qqmgrgsmskivkiigreiidsrgnptveaevhleggfvgmaaapsgastgsrealelrd
gdksrflgkgvtkavaavngpiaqaligkdakdqagidkimidldgtenkskfganaila
vslanakaaaaakgmplyehiaelngtpgkysmpvpmmniinggehadnnvdiqefmiqp
vgaktvkeairmgsevfhhlakvlkakgmntavgdeggyapnlgsnaealaviaeavkaa
gyelgkditlamdcaasefykdgkyvlagegnkaftseefthfleeltkqypivsiedgl
desdwdgfayqtkvlgdkiqlvgddlfvtntkilkegiekgiansilikfnqigsltetl
aaikmakdagytavishrsgetedatiadlavgtaagqiktgsmsrsdrvakynqlirie
ealgekapyngrkeikgqa