Lineage for Protein: Xylanase A, catalytic core

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2416558Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2417234Family c.1.8.3: beta-glycanases [51487] (27 protein domains)
    consist of a number of sequence families
  6. 2417766Protein Xylanase A, catalytic core [51514] (8 species)

Species:

  1. 2417767Cellulomonas fimi [TaxId:1708] [51520] (14 PDB entries)
    synonym: beta-1,4-glycanase Cex
    1. Domain for 1exp:
    2. Domain for 1fh7:
    3. Domain for 1fh8:
    4. Domain for 1fh9:
    5. Domain for 1fhd:
    6. Domain for 1j01:
    7. Domain for 2exo:
    8. Domain for 2his:
    9. Domain for 2xyl:
    10. Domain for 3cuf:
    11. Domain for 3cug:
    12. Domain for 3cuh:
    13. Domain for 3cui:
    14. Domain for 3cuj:
  2. 2417782Emericella nidulans (Aspergillus nidulans) [TaxId:162425] [110350] (1 PDB entry)
    Uniprot Q00177
  3. 2417784Fungus (Penicillium simplicissimum) [TaxId:69488] [51516] (7 PDB entries)
    1. Domain for 1b30:
    2. Domain for 1b31:
    3. Domain for 1b3v:
    4. Domain for 1b3w:
    5. Domain for 1b3x:
    6. Domain for 1b3y:
    7. Domain for 1b3z:
  4. 2417792Pseudomonas fluorescens [TaxId:294] [51517] (7 PDB entries)
    Uniprot P14768 265-610
    1. Domains for 1clx:
      1. 2417799Domain d1clxa_: 1clx A: [28899]
        complexed with ca
      2. 2417800Domain d1clxb_: 1clx B: [28900]
        complexed with ca
      3. 2417801Domain d1clxc_: 1clx C: [28901]
        complexed with ca
      4. 2417802Domain d1clxd_: 1clx D: [28902]
        complexed with ca
    2. Domains for 1e5n:
      1. 2417807Domain d1e5na_: 1e5n A: [28904]
        complexed with ca; mutant
      2. 2417808Domain d1e5nb_: 1e5n B: [28905]
        complexed with ca; mutant
    3. Domains for 1w2p:
      1. 2417795Domain d1w2pa_: 1w2p A: [114102]
        complexed with ca, edo
      2. 2417796Domain d1w2pb_: 1w2p B: [114103]
        complexed with ca, edo
    4. Domains for 1w2v:
      1. 2417797Domain d1w2va_: 1w2v A: [114104]
        complexed with ca, edo; mutant
      2. 2417798Domain d1w2vb_: 1w2v B: [114105]
        complexed with ca, edo; mutant
    5. Domains for 1w32:
      1. 2417793Domain d1w32a_: 1w32 A: [114120]
        complexed with ca, edo; mutant
      2. 2417794Domain d1w32b_: 1w32 B: [114121]
        complexed with ca, edo; mutant
    6. Domains for 1w3h:
      1. 2417803Domain d1w3ha_: 1w3h A: [114140]
        complexed with ca, edo; mutant
      2. 2417804Domain d1w3hb_: 1w3h B: [114141]
        complexed with ca, edo; mutant
    7. Domains for 1xys:
      1. 2417805Domain d1xysa_: 1xys A: [28903]
        CASP1
        complexed with ca; mutant
      2. 2417806Domain d1xysb_: 1xys B: [118633]
        duplicate of 1XYS
        complexed with ca; mutant
  5. 2417809Streptomyces halstedii [TaxId:1944] [102070] (1 PDB entry)
  6. 2417811Streptomyces lividans [TaxId:1916] [51515] (9 PDB entries)
    Uniprot P26514 43-344
    1. Domain for 1e0v:
    2. Domain for 1e0w:
    3. Domains for 1e0x:
      1. 2417818Domain d1e0xa_: 1e0x A: [59151]
        complexed with gol
      2. 2417819Domain d1e0xb_: 1e0x B: [59152]
        complexed with gol
    4. Domain for 1od8:
    5. Domain for 1v0k:
    6. Domain for 1v0l:
    7. Domain for 1v0m:
    8. Domain for 1v0n:
    9. Domain for 1xas:
  7. 2417822Streptomyces olivaceoviridis [TaxId:1921] [51519] (12 PDB entries)
    Uniprot Q7SI98
    N-terminal domain; fused with a ricin A-like beta-trefoil domain
    1. Domains for 1isv:
      1. 2417833Domain d1isva2: 1isv A:1-303 [66342]
        Other proteins in same PDB: d1isva1, d1isvb1
        complexed with xyp
      2. 2417834Domain d1isvb2: 1isv B:501-803 [66344]
        Other proteins in same PDB: d1isva1, d1isvb1
        complexed with xyp
    2. Domains for 1isw:
      1. 2417839Domain d1iswa2: 1isw A:1-303 [66346]
        Other proteins in same PDB: d1iswa1, d1iswb1
        complexed with xyp
      2. 2417840Domain d1iswb2: 1isw B:501-803 [66348]
        Other proteins in same PDB: d1iswa1, d1iswb1
        complexed with xyp
    3. Domains for 1isx:
      1. 2417843Domain d1isxa2: 1isx A:1-303 [66350]
        Other proteins in same PDB: d1isxa1, d1isxb1
        complexed with xyp
      2. 2417844Domain d1isxb2: 1isx B:501-803 [66352]
        Other proteins in same PDB: d1isxa1, d1isxb1
        complexed with xyp
    4. Domains for 1isy:
      1. 2417835Domain d1isya2: 1isy A:1-303 [66354]
        Other proteins in same PDB: d1isya1, d1isyb1
        complexed with bgc
      2. 2417836Domain d1isyb2: 1isy B:501-803 [66356]
        Other proteins in same PDB: d1isya1, d1isyb1
        complexed with bgc
    5. Domains for 1isz:
      1. 2417827Domain d1isza2: 1isz A:1-303 [66358]
        Other proteins in same PDB: d1isza1, d1iszb1
        complexed with gal
      2. 2417828Domain d1iszb2: 1isz B:501-803 [66360]
        Other proteins in same PDB: d1isza1, d1iszb1
        complexed with gal
    6. Domains for 1it0:
      1. 2417829Domain d1it0a2: 1it0 A:1-303 [66362]
        Other proteins in same PDB: d1it0a1, d1it0b1
        complexed with lat
      2. 2417830Domain d1it0b2: 1it0 B:501-803 [66364]
        Other proteins in same PDB: d1it0a1, d1it0b1
        complexed with lat
    7. Domains for 1v6u:
      1. 2417841Domain d1v6ua2: 1v6u A:1-303 [100427]
        Other proteins in same PDB: d1v6ua1, d1v6ub1
        complexed with xyp, xys
      2. 2417842Domain d1v6ub2: 1v6u B:501-803 [100429]
        Other proteins in same PDB: d1v6ua1, d1v6ub1
        complexed with xyp, xys
    8. Domains for 1v6v:
      1. 2417831Domain d1v6va2: 1v6v A:1-303 [100431]
        Other proteins in same PDB: d1v6va1, d1v6vb1
        complexed with xyp
      2. 2417832Domain d1v6vb2: 1v6v B:501-803 [100433]
        Other proteins in same PDB: d1v6va1, d1v6vb1
        complexed with xyp
    9. Domains for 1v6w:
      1. 2417825Domain d1v6wa2: 1v6w A:1-303 [100435]
        Other proteins in same PDB: d1v6wa1, d1v6wb1
        complexed with xyp
      2. 2417826Domain d1v6wb2: 1v6w B:501-803 [100437]
        Other proteins in same PDB: d1v6wa1, d1v6wb1
        complexed with xyp
    10. Domains for 1v6x:
      1. 2417837Domain d1v6xa2: 1v6x A:1-303 [100439]
        Other proteins in same PDB: d1v6xa1, d1v6xb1
        complexed with xyp
      2. 2417838Domain d1v6xb2: 1v6x B:501-803 [100441]
        Other proteins in same PDB: d1v6xa1, d1v6xb1
        complexed with xyp
    11. Domain for 1v6y:
    12. Domains for 1xyf:
      1. 2417823Domain d1xyfa2: 1xyf A:1-303 [28909]
        Other proteins in same PDB: d1xyfa1, d1xyfb1
      2. 2417824Domain d1xyfb2: 1xyf B:501-803 [28910]
        Other proteins in same PDB: d1xyfa1, d1xyfb1
  8. 2417846Thermoascus aurantiacus [TaxId:5087] [51518] (11 PDB entries)
    1. Domain for 1fxm:
    2. Domain for 1gok:
    3. Domain for 1gom:
    4. Domain for 1goo:
    5. Domain for 1goq:
    6. Domain for 1gor:
    7. Domain for 1i1w:
      • 2417847Domain d1i1wa_: 1i1w A: [76732]
        ultra high resolution structure
        complexed with acn, eoh, gol, unx
    8. Domain for 1i1x:
    9. Domain for 1k6a:
    10. Domain for 1tux:
      • 2417854Domain d1tuxa_: 1tux A: [28907]
        X-ray determined sequence differs from that in other entries
    11. Domain for 2bnj:

More info for Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases

Timeline for Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases: