Lineage for Protein: DNA repair protein Rad51, catalytic domain

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2112131Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (21 protein domains)
    core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest
  6. 2112413Protein DNA repair protein Rad51, catalytic domain [82412] (7 species)

Species:

  1. 2112414Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110554] (2 PDB entries)
    Uniprot P25454 81-395
    1. Domains for 1szp:
      1. 2112416Domain d1szpa2: 1szp A:145-395 [106177]
        Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
        complexed with so4
      2. 2112417Domain d1szpb2: 1szp B:145-395 [106179]
        Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
        complexed with so4
      3. 2112418Domain d1szpc2: 1szp C:145-395 [106181]
        Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
        complexed with so4
      4. 2112419Domain d1szpd2: 1szp D:145-395 [106183]
        Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
        complexed with so4
      5. 2112420Domain d1szpe2: 1szp E:145-395 [106185]
        Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
        complexed with so4
      6. 2112421Domain d1szpf2: 1szp F:145-395 [106187]
        Other proteins in same PDB: d1szpa1, d1szpb1, d1szpc1, d1szpd1, d1szpe1, d1szpf1
        complexed with so4
    2. Domain for 3lda:
  2. 2112422Human (Homo sapiens) [TaxId:9606] [82413] (1 PDB entry)
    • Domain for 1n0w:
      • 2112423Domain d1n0wa_: 1n0w A: [79772]
        Other proteins in same PDB: d1n0wb_
        complex with BRCA2 BRC4 repeat peptide
        protein/DNA complex; complexed with cl, edo, mg
  3. 2112424Methanococcus voltae [TaxId:2188] [110555] (14 PDB entries)
    Uniprot O73948
    1. Domain for 1t4g:
    2. Domain for 1xu4:
    3. Domain for 1z4b:
    4. Domain for 1z4c:
    5. Domain for 1z4d:
    6. Domain for 2b21:
    7. Domain for 2fpk:
    8. Domain for 2fpl:
    9. Domain for 2fpm:
    10. Domain for 2gdj:
    11. Domain for 2i1q:
    12. Domain for 3fyh:
    13. Domains for 4dc9:
      1. 2112449Domain d4dc9a1: 4dc9 A:61-322 [219675]
        Other proteins in same PDB: d4dc9a2, d4dc9b2, d4dc9c2, d4dc9d2, d4dc9e2, d4dc9f2
        automated match to d1n0wa_
        complexed with no3
      2. 2112450Domain d4dc9b1: 4dc9 B:61-322 [219676]
        Other proteins in same PDB: d4dc9a2, d4dc9b2, d4dc9c2, d4dc9d2, d4dc9e2, d4dc9f2
        automated match to d1n0wa_
        complexed with no3
      3. 2112451Domain d4dc9c1: 4dc9 C:61-322 [219677]
        Other proteins in same PDB: d4dc9a2, d4dc9b2, d4dc9c2, d4dc9d2, d4dc9e2, d4dc9f2
        automated match to d1n0wa_
        complexed with no3
      4. 2112452Domain d4dc9d1: 4dc9 D:61-322 [219678]
        Other proteins in same PDB: d4dc9a2, d4dc9b2, d4dc9c2, d4dc9d2, d4dc9e2, d4dc9f2
        automated match to d1n0wa_
        complexed with no3
      5. 2112453Domain d4dc9e1: 4dc9 E:61-322 [219679]
        Other proteins in same PDB: d4dc9a2, d4dc9b2, d4dc9c2, d4dc9d2, d4dc9e2, d4dc9f2
        automated match to d1n0wa_
        complexed with no3
      6. 2112454Domain d4dc9f1: 4dc9 F:61-322 [219680]
        Other proteins in same PDB: d4dc9a2, d4dc9b2, d4dc9c2, d4dc9d2, d4dc9e2, d4dc9f2
        automated match to d1n0wa_
        complexed with no3
    14. Domains for 4qkq:
      1. 2112436Domain d4qkqa1: 4qkq A:61-322 [273657]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      2. 2112437Domain d4qkqb1: 4qkq B:61-322 [273658]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      3. 2112438Domain d4qkqc1: 4qkq C:61-322 [273661]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      4. 2112439Domain d4qkqd1: 4qkq D:61-322 [273659]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      5. 2112440Domain d4qkqe1: 4qkq E:61-322 [273660]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      6. 2112441Domain d4qkqf1: 4qkq F:61-322 [273662]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      7. 2112442Domain d4qkqg1: 4qkq G:61-322 [273664]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      8. 2112443Domain d4qkqh1: 4qkq H:61-322 [273663]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      9. 2112444Domain d4qkqi1: 4qkq I:61-322 [273666]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      10. 2112445Domain d4qkqj1: 4qkq J:61-322 [273665]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      11. 2112446Domain d4qkqk1: 4qkq K:61-322 [273667]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
      12. 2112447Domain d4qkql1: 4qkq L:61-322 [273668]
        Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
        automated match to d4dc9a_
        protein/DNA complex; complexed with 35n, no3
  4. 2112455Methanococcus voltae [TaxId:523842] [226807] (1 PDB entry)
  5. 2112457Pyrococcus furiosus [TaxId:2261] [102377] (1 PDB entry)
  6. 2112465Sulfolobus solfataricus [TaxId:2287] [225209] (2 PDB entries)
    1. Domain for 2dfl:
    2. Domains for 2zub:
      1. 2112466Domain d2zuba2: 2zub A:73-322 [207987]
        Other proteins in same PDB: d2zuba1, d2zubb1
        automated match to d1pzna2
      2. 2112467Domain d2zubb2: 2zub B:73-322 [207989]
        Other proteins in same PDB: d2zuba1, d2zubb1
        automated match to d1pzna2
  7. 2112469Sulfolobus solfataricus [TaxId:273057] [225378] (1 PDB entry)

More info for Protein DNA repair protein Rad51, catalytic domain from c.37.1.11: RecA protein-like (ATPase-domain)

Timeline for Protein DNA repair protein Rad51, catalytic domain from c.37.1.11: RecA protein-like (ATPase-domain):