SCOPe 2.08: Domain d2fpma2: 2fpm A:65-322

Lineage for d2fpma2 (2fpm A:65-322)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (22 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein DNA repair protein Rad51, catalytic domain [82412] (7 species)

7. Species Methanococcus voltae [TaxId:2188] [110555] (14 PDB entries)
   Uniprot O73948

8. Domain d2fpma2: 2fpm A:65-322 [204259]
   Other proteins in same PDB: d2fpma1
   automated match to d1t4ga2
   complexed with anp, k, mg

Details for d2fpma2

PDB Entry: 2fpm, 2 Å

PDB Description: rada recombinase in complex with amp-pnp and high concentration of k+

PDB Compounds: (A:) DNA repair and recombination protein radA

SCOPe Domain Sequences for d2fpma2:

Sequence, based on SEQRES records:

>d2fpma2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Methanococcus voltae [TaxId: 2188]}
ksgidllkqrstvwklstssseldsvlggglesqsvtefagvfgsgktqimhqscvnlqn
peflfydeeavskgevaqpkavyidtegtfrperimqmaehagidgqtvldntfvarayn
sdmqmlfaekiedliqegnniklvvidsltstfrneytgrgklaerqqklgrhmatlnkl
adlfncvvlvtnqvsakpdaffgmaeqaigghivghaatfrffvrkgkgdkrvaklydsp
hlpdaeaifritekgiqd

Sequence, based on observed residues (ATOM records):

>d2fpma2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Methanococcus voltae [TaxId: 2188]}
ksgidllkqrstvwklstssseldsvlggglesqsvtefagvfgsgktqimhqscvnlqn
peflfydeeavskgevaqpkavyidtegtfrperimqmaehagidgqtvldntfvarayn
sdmqmlfaekiedliqegnniklvvidsltstfrneytgrgklaerqqklgrhmatlnkl
adlfncvvlvtnqvsakaeqaigghivghaatfrffvrkgkgdkrvaklydsphlpdaea
ifritekgiqd

Timeline for d2fpma2:

• d2fpma2 first appeared in SCOPe 2.03
  
• d2fpma2 appears in SCOPe 2.07