Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987995Superfamily a.24.13: Domain of the SRP/SRP receptor G-proteins [47364] (2 families) (S)
  5. 1988051Family a.24.13.0: automated matches [229049] (1 protein)
    not a true family
  6. 1988052Protein automated matches [229050] (4 species)
    not a true protein

Species:

  1. 1988053Escherichia coli K-12 [TaxId:83333] [229051] (2 PDB entries)
    1. Domain for 2yhs:
    2. Domains for 4c7o:
      1. 1988055Domain d4c7ob1: 4c7o B:30-90 [229055]
        Other proteins in same PDB: d4c7ob2, d4c7od2, d4c7od3
        automated match to d2qy9a1
        protein/RNA complex; complexed with alf, gdp, mg
      2. 1988056Domain d4c7od1: 4c7o D:30-90 [229052]
        Other proteins in same PDB: d4c7ob2, d4c7od2, d4c7od3
        automated match to d2qy9a1
        protein/RNA complex; complexed with alf, gdp, mg
  2. 1988057Thermus aquaticus [TaxId:271] [255075] (4 PDB entries)
    1. Domains for 2c03:
      1. 1988058Domain d2c03a1: 2c03 A:1-88 [129566]
        Other proteins in same PDB: d2c03a2, d2c03b2
        automated match to d2c03a1
        protein/RNA complex; complexed with dio, edo, gdp
      2. 1988059Domain d2c03b1: 2c03 B:1-88 [129568]
        Other proteins in same PDB: d2c03a2, d2c03b2
        automated match to d2c03b1
        protein/RNA complex; complexed with dio, edo, gdp
    2. Domains for 2cnw:
      1. 1988063Domain d2cnwd1: 2cnw D:21-90 [130655]
        Other proteins in same PDB: d2cnwa1, d2cnwa2, d2cnwb1, d2cnwb2, d2cnwc1, d2cnwc2, d2cnwd2, d2cnwe1, d2cnwe2, d2cnwf2
        automated match to d1okkd1
        protein/RNA complex; complexed with 5gp, alf, gdp, mg
      2. 1988064Domain d2cnwf1: 2cnw F:26-78 [130659]
        Other proteins in same PDB: d2cnwa1, d2cnwa2, d2cnwb1, d2cnwb2, d2cnwc1, d2cnwc2, d2cnwd2, d2cnwe1, d2cnwe2, d2cnwf2
        automated match to d1okkd1
        protein/RNA complex; complexed with 5gp, alf, gdp, mg
    3. Domain for 2iyl:
    4. Domains for 2j7p:
      1. 1988060Domain d2j7pd1: 2j7p D:22-78 [138123]
        Other proteins in same PDB: d2j7pa1, d2j7pa2, d2j7pb1, d2j7pb2, d2j7pd2, d2j7pe2
        automated match to d1okkd1
        protein/RNA complex; complexed with edo, gnp, iod, k, mg
      2. 1988061Domain d2j7pe1: 2j7p E:27-78 [138125]
        Other proteins in same PDB: d2j7pa1, d2j7pa2, d2j7pb1, d2j7pb2, d2j7pd2, d2j7pe2
        automated match to d1okkd1
        protein/RNA complex; complexed with edo, gnp, iod, k, mg
  3. 2274982Sulfolobus solfataricus [TaxId:273057] [318283] (1 PDB entry)
  4. 2274995Sulfolobus solfataricus [TaxId:2287] [318296] (1 PDB entry)

More info for Protein automated matches from a.24.13.0: automated matches

Timeline for Protein automated matches from a.24.13.0: automated matches: