PDB entry 4c7o

View 4c7o on RCSB PDB site
Description: The structural basis of FtsY recruitment and GTPase activation by SRP RNA
Class: nuclear protein/RNA
Keywords: nuclear protein-RNA complex, nuclear protein, protein translocation, signal recognition particle, signal recognition particle receptor, GDP alf3/4
Deposited on 2013-09-23, released 2013-11-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-01-08, with a file datestamp of 2014-01-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.1657
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: signal recognition particle protein
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: signal recognition particle receptor ftsy
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4c7ob1, d4c7ob2
  • Chain 'C':
    Compound: signal recognition particle protein
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: signal recognition particle receptor ftsy
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10121 (4-End)
      • expression tag (0-3)
    Domains in SCOPe 2.08: d4c7od1, d4c7od2, d4c7od3
  • Chain 'E':
    Compound: srp RNA
    Species: Escherichia coli [TaxId:83333]
  • Heterogens: ALF, MG, GDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4c7oB (B:)
gkkidddlfeeleeqlliadvgvettrkiitnltegasrkqlrdaealygllkeemgeil
akvdeplnvegkapfvilmvgvngvgktttigklarqfeqqgksvmlaagdtfraaaveq
lqvwgqrnnipviaqhtgadsasvifdaiqaakarnidvliadtagrlqnkshlmeelkk
ivrvmkkldveaphevmltidastgqnavsqaklfheavgltgitltkldgtakggvifs
vadqfgipiryigvgeriedlrpfkaddfiealfared

    Sequence, based on observed residues (ATOM records): (download) 
    >4c7oB (B:)
dddlfeeleeqlliadvgvettrkiitnltegasrkqlrdaealygllkeemgeilakvd
eplnvegkapfvilmvgvngvgktttigklarqfeqqgksvmlaagdtfraaaveqlqvw
gqrnnipviaqhtgadsasvifdaiqaakarnidvliadtagrlqnkshlmeelkkivrv
mkkldveaphevmltidastgqnavsqaklfheavgltgitltkldgtakggvifsvadq
fgipiryigvgeriedlrpfkaddfiealfa

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4c7oD (D:)
gkkidddlfeeleeqlliadvgvettrkiitnltegasrkqlrdaealygllkeemgeil
akvdeplnvegkapfvilmvgvngvgktttigklarqfeqqgksvmlaagdtfraaaveq
lqvwgqrnnipviaqhtgadsasvifdaiqaakarnidvliadtagrlqnkshlmeelkk
ivrvmkkldveaphevmltidastgqnavsqaklfheavgltgitltkldgtakggvifs
vadqfgipiryigvgeriedlrpfkaddfiealfared

    Sequence, based on observed residues (ATOM records): (download) 
    >4c7oD (D:)
gkkidddlfeeleeqlliadvgvettrkiitnltegasrkqlrdaealygllkeemgeil
akvdeplnvegkapfvilmvgvngvgktttigklarqfeqqgksvmlaagdtfraaaveq
lqvwgqrnnipviaqhtgadsasvifdaiqaakarnidvliadtagrlqnkshlmeelkk
ivrvmkkldveaphevmltidastgqnavsqaklfheavgltgitltkldgtakggvifs
vadqfgipiryigvgeriedlrpfkaddfiealfare

  • Chain 'E':
    No sequence available.