SCOPe 2.08: Domain d7epka2: 7epk A:88-293

Lineage for d7epka2 (7epk A:88-293)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (158 species)
   not a true protein

7. Species Aeropyrum pernix [TaxId:272557] [231666] (4 PDB entries)

8. Domain d7epka2: 7epk A:88-293 [405309]
   Other proteins in same PDB: d7epka1, d7epka3
   automated match to d1qzxa3
   complexed with gdp, mg

Details for d7epka2

PDB Entry: 7epk, 2.7 Å

PDB Description: crystal structure of signal recognition particle 54 kda protein (srp54) from aeropyrum pernix k1 in complex with gdp

PDB Compounds: (A:) Signal recognition particle 54 kDa protein

SCOPe Domain Sequences for d7epka2:

Sequence; same for both SEQRES and ATOM records:

>d7epka2 c.37.1.0 (A:88-293) automated matches {Aeropyrum pernix [TaxId: 272557]}
pqvdppktpwivllvgvqgsgktttagklayyyvrrgykvglvssdthrpgayeqlkrla
eeagamfygeregdpaeiarrgledllsrgaeivivdtagrhghgeearlldemkaiask
vrpdevalvidasigqkamglaerfhkstpigsiivtkmdgtargggaltaaavtgarik
figtgetlgelepfaprrfvarilgm

Timeline for d7epka2:

• d7epka2 first appeared in SCOPe 2.07