PDB entry 6cvd

View 6cvd on RCSB PDB site
Description: High resolution crystal structure of FtsY-NG domain of E. coli bound to fragment 1
Class: protein transport
Keywords: cotranslational delivery SRP, PROTEIN TRANSPORT
Deposited on 2018-03-27, released 2018-08-22
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-08-22, with a file datestamp of 2018-08-17.
Experiment type: XRAY
Resolution: 1.78 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: signal recognition particle receptor ftsy
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ftsY, b3464, JW3429
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10121 (1-End)
      • expression tag (0)
    Domains in SCOPe 2.07: d6cvda1, d6cvda2, d6cvda3
  • Chain 'B':
    Compound: signal recognition particle receptor ftsy
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ftsY, b3464, JW3429
    Database cross-references and differences (RAF-indexed):
    • Uniprot P10121 (1-302)
      • expression tag (0)
    Domains in SCOPe 2.07: d6cvdb1, d6cvdb2, d6cvdb3
  • Heterogens: 4ME, NH4, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6cvdA (A:)
    gfarlkrsllktkenlgsgfislfrgkkidddlfeeleeqlliadvgvettrkiitnlte
    gasrkqlrdaealygllkeemgeilakvdeplnvegkapfvilmvgvngvgktttigkla
    rqfeqqgksvmlaagdtfraaaveqlqvwgqrnnipviaqhtgadsasvifdaiqaakar
    nidvliadtagrlqnkshlmeelkkivrvmkkldveaphevmltidastgqnavsqaklf
    heavgltgitltkldgtakggvifsvadqfgipiryigvgeriedlrpfkaddfiealfa
    red
    

    Sequence, based on observed residues (ATOM records): (download)
    >6cvdA (A:)
    gfarlkrsllktkenlgsgfislfrgkkidddlfeeleeqlliadvgvettrkiitnlte
    gasrkqlrdaealygllkeemgeilakvdeplnvegkapfvilmvgvngvgktttigkla
    rqfeqqgksvmlaagdtfraaaveqlqvwgqrnnipviaqhtgadsasvifdaiqaakar
    nidvliadtagrlqnkshlmeelkkivrvmkkldveaphevmltidastgqnavsqaklf
    heavgltgitltkldgtakggvifsvadqfgipiryigvgeriedlrpfkaddfiealfa
    re
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6cvdB (B:)
    gfarlkrsllktkenlgsgfislfrgkkidddlfeeleeqlliadvgvettrkiitnlte
    gasrkqlrdaealygllkeemgeilakvdeplnvegkapfvilmvgvngvgktttigkla
    rqfeqqgksvmlaagdtfraaaveqlqvwgqrnnipviaqhtgadsasvifdaiqaakar
    nidvliadtagrlqnkshlmeelkkivrvmkkldveaphevmltidastgqnavsqaklf
    heavgltgitltkldgtakggvifsvadqfgipiryigvgeriedlrpfkaddfiealfa
    red