Species:

1. Bacillus cereus [TaxId:222523] [188293] (2 PDB entries)

   1. Domain for 3bja:

      • Domain d3bjaa_: 3bja A: [172659] automated match to d2a61a1

   2. Domain for 4esf:

      • Domain d4esfa_: 4esf A: [193767] automated match to d3hhha_

2. Bacillus cereus [TaxId:226900] [186878] (2 PDB entries)

   1. Domains for 1ylf:

      1. Domain d1ylfb_: 1ylf B: [123649] Other proteins in same PDB: d1ylfa1 automated match to d1xd7a_ complexed with cl

      2. Domain d1ylfc_: 1ylf C: [123650] Other proteins in same PDB: d1ylfa1 automated match to d1xd7a_ complexed with cl

   2. Domain for 4esb:

      • Domain d4esba_: 4esb A: [194251] automated match to d3hhhb_ complexed with gol, so4

3. Bacillus subtilis [TaxId:1423] [187193] (4 PDB entries)

   1. Domains for 2fe3:

      1. Domain d2fe3a_: 2fe3 A: [204206] automated match to d2o03a_ complexed with zn

      2. Domain d2fe3b_: 2fe3 B: [204207] automated match to d2o03a_ complexed with zn

   2. Domains for 2hzt:

      1. Domain d2hztb_: 2hzt B: [147463] Other proteins in same PDB: d2hzta1 automated match to d1z7ub1

      2. Domain d2hztc_: 2hzt C: [147464] Other proteins in same PDB: d2hzta1 automated match to d1z7ub1

      3. Domain d2hztd_: 2hzt D: [147465] Other proteins in same PDB: d2hzta1 automated match to d1z7ub1

   3. Domains for 2rgv:

      1. Domain d2rgva_: 2rgv A: [206105] automated match to d2o03a_ complexed with zn

      2. Domain d2rgvb_: 2rgv B: [206106] automated match to d2o03a_ complexed with zn

   4. Domains for 4a5n:

      1. Domain d4a5na_: 4a5n A: [218651] automated match to d1z7ub_ complexed with bme, edo

      2. Domain d4a5nb_: 4a5n B: [218652] automated match to d1z7ub_ complexed with bme, edo

      3. Domain d4a5nc_: 4a5n C: [218653] automated match to d1z7ub_ complexed with bme, edo

      4. Domain d4a5nd_: 4a5n D: [218654] automated match to d1z7ub_ complexed with bme, edo

4. Campylobacter jejuni [TaxId:32022] [195104] (1 PDB entry)

   • Domains for 4ets:

     1. Domain d4etsa_: 4ets A: [195106] automated match to d2xigc_ complexed with cl, zn

     2. Domain d4etsb_: 4ets B: [195105] automated match to d2xigc_ complexed with cl, zn

5. Carboxydothermus hydrogenoformans [TaxId:129958] [225204] (1 PDB entry)

   • Domains for 2fmy:

     1. Domain d2fmya2: 2fmy A:139-219 [204236] Other proteins in same PDB: d2fmya1, d2fmyb1, d2fmyc1, d2fmyd1 automated match to d1ft9a1 complexed with hem, imd

     2. Domain d2fmyb2: 2fmy B:1139-1219 [204238] Other proteins in same PDB: d2fmya1, d2fmyb1, d2fmyc1, d2fmyd1 automated match to d1ft9a1 complexed with hem, imd

     3. Domain d2fmyc2: 2fmy C:2139-2219 [204240] Other proteins in same PDB: d2fmya1, d2fmyb1, d2fmyc1, d2fmyd1 automated match to d1ft9a1 complexed with hem, imd

     4. Domain d2fmyd2: 2fmy D:3139-3219 [204242] Other proteins in same PDB: d2fmya1, d2fmyb1, d2fmyc1, d2fmyd1 automated match to d1ft9a1 complexed with hem, imd

6. Clarkia breweri [TaxId:36903] [226317] (2 PDB entries)

   1. Domains for 3reo:

      1. Domain d3reoa1: 3reo A:17-122 [215776] Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2 automated match to d1kyze1 complexed with eug, sah

      2. Domain d3reob1: 3reo B:16-122 [215778] Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2 automated match to d1kyze1 complexed with eug, sah

      3. Domain d3reoc1: 3reo C:8-122 [233442] Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2 automated match to d3tkyd1 complexed with eug, sah

      4. Domain d3reod1: 3reo D:9-122 [233440] Other proteins in same PDB: d3reoa2, d3reob2, d3reoc2, d3reod2 automated match to d3tkyd1 complexed with eug, sah

   2. Domains for 3tky:

      1. Domain d3tkya1: 3tky A:16-122 [216857] Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2 automated match to d1kyze1 complexed with n7i, sah

      2. Domain d3tkyb1: 3tky B:9-122 [216859] Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2 automated match to d1kyze1 complexed with n7i, sah

      3. Domain d3tkyc1: 3tky C:16-122 [216861] Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2 automated match to d1kyze1 complexed with n7i, sah

      4. Domain d3tkyd1: 3tky D:9-122 [216863] Other proteins in same PDB: d3tkya2, d3tkyb2, d3tkyc2, d3tkyd2 automated match to d1kyze1 complexed with n7i, sah

7. Clostridium acetobutylicum [TaxId:1488] [189157] (1 PDB entry)

   • Domains for 3jw4:

     1. Domain d3jw4a_: 3jw4 A: [178861] automated match to d2fbha1 complexed with gol, imd, k

     2. Domain d3jw4b_: 3jw4 B: [178862] automated match to d2fbha1 complexed with gol, imd, k

     3. Domain d3jw4c_: 3jw4 C: [178863] automated match to d2fbha1 complexed with gol, imd, k

8. Corynebacterium glutamicum [TaxId:1718] [226340] (1 PDB entry)

   • Domains for 3r6s:

     1. Domain d3r6sa2: 3r6s A:148-227 [215598] Other proteins in same PDB: d3r6sa1, d3r6sb1, d3r6sc1, d3r6sd1, d3r6se1, d3r6sf1 automated match to d1i5za1 complexed with cmp, hez

     2. Domain d3r6sb2: 3r6s B:148-227 [215600] Other proteins in same PDB: d3r6sa1, d3r6sb1, d3r6sc1, d3r6sd1, d3r6se1, d3r6sf1 automated match to d1i5za1 complexed with cmp, hez

     3. Domain d3r6sc2: 3r6s C:148-226 [215602] Other proteins in same PDB: d3r6sa1, d3r6sb1, d3r6sc1, d3r6sd1, d3r6se1, d3r6sf1 automated match to d1i5za1 complexed with cmp, hez

     4. Domain d3r6sd2: 3r6s D:148-226 [215604] Other proteins in same PDB: d3r6sa1, d3r6sb1, d3r6sc1, d3r6sd1, d3r6se1, d3r6sf1 automated match to d1i5za1 complexed with cmp, hez

     5. Domain d3r6se2: 3r6s E:148-227 [215606] Other proteins in same PDB: d3r6sa1, d3r6sb1, d3r6sc1, d3r6sd1, d3r6se1, d3r6sf1 automated match to d1i5za1 complexed with cmp, hez

     6. Domain d3r6sf2: 3r6s F:148-227 [215608] Other proteins in same PDB: d3r6sa1, d3r6sb1, d3r6sc1, d3r6sd1, d3r6se1, d3r6sf1 automated match to d1i5za1 complexed with cmp, hez

9. Eggerthella lenta [TaxId:479437] [226359] (1 PDB entry)

   • Domains for 4ejo:

     1. Domain d4ejoa_: 4ejo A: [220586] automated match to d1xmab_ complexed with eoh

     2. Domain d4ejob_: 4ejo B: [220587] automated match to d1xmab_ complexed with eoh

10. Enterococcus faecalis [TaxId:1351] [188913] (1 PDB entry)

    • Domains for 3hhh:

      1. Domain d3hhha_: 3hhh A: [177574] automated match to d1xmab_ complexed with gol, so4

      2. Domain d3hhhb_: 3hhh B: [177575] automated match to d1xmab_ complexed with gol, so4

11. Escherichia coli [TaxId:83333] [225713] (13 PDB entries)

    1. Domains for 3fwe:

       1. Domain d3fwea2: 3fwe A:138-207 [210240] Other proteins in same PDB: d3fwea1, d3fweb1 automated match to d1i5za1 complexed with pro; mutant

       2. Domain d3fweb2: 3fwe B:138-208 [210242] Other proteins in same PDB: d3fwea1, d3fweb1 automated match to d1i5za1 complexed with pro; mutant

    2. Domains for 3jso:

       1. Domain d3jsoa1: 3jso A:2-69 [212072] Other proteins in same PDB: d3jsoa2, d3jsob2 automated match to d1jhfa1 protein/DNA complex

       2. Domain d3jsob1: 3jso B:2-69 [212074] Other proteins in same PDB: d3jsoa2, d3jsob2 automated match to d1jhfa1 protein/DNA complex

    3. Domains for 3jsp:

       1. Domain d3jspa1: 3jsp A:2-70 [212076] Other proteins in same PDB: d3jspa2, d3jspb2 automated match to d1jhfa1 protein/DNA complex

       2. Domain d3jspb1: 3jsp B:2-71 [212078] Other proteins in same PDB: d3jspa2, d3jspb2 automated match to d1jhfa1 protein/DNA complex

    4. Domains for 3kcc:

       1. Domain d3kcca2: 3kcc A:138-206 [212286] Other proteins in same PDB: d3kcca1, d3kccb1 automated match to d1i5za1 complexed with cmp; mutant

       2. Domain d3kccb2: 3kcc B:138-206 [212288] Other proteins in same PDB: d3kcca1, d3kccb1 automated match to d1i5za1 complexed with cmp; mutant

    5. Domains for 3rdi:

       1. Domain d3rdia2: 3rdi A:138-207 [215734] Other proteins in same PDB: d3rdia1, d3rdib1 automated match to d1i5za1 complexed with cmp

       2. Domain d3rdib2: 3rdi B:138-207 [215736] Other proteins in same PDB: d3rdia1, d3rdib1 automated match to d1i5za1 complexed with cmp

    6. Domains for 3rou:

       1. Domain d3roua2: 3rou A:138-207 [215963] Other proteins in same PDB: d3roua1, d3roub1 automated match to d1i5za1 complexed with cmp

       2. Domain d3roub2: 3rou B:138-207 [215965] Other proteins in same PDB: d3roua1, d3roub1 automated match to d1i5za1 complexed with cmp

    7. Domains for 3rpq:

       1. Domain d3rpqa2: 3rpq A:138-207 [215978] Other proteins in same PDB: d3rpqa1, d3rpqb1 automated match to d1i5za1 complexed with cmp, po4

       2. Domain d3rpqb2: 3rpq B:138-208 [215980] Other proteins in same PDB: d3rpqa1, d3rpqb1 automated match to d1i5za1 complexed with cmp, po4

    8. Domains for 4hzf:

       1. Domain d4hzfa2: 4hzf A:139-208 [234740] Other proteins in same PDB: d4hzfa1, d4hzfb1 automated match to d4hzfb2 complexed with cmp, gol, po4

       2. Domain d4hzfb2: 4hzf B:139-209 [228637] Other proteins in same PDB: d4hzfa1, d4hzfb1 automated match to d1hw5a1 complexed with cmp, gol, po4

    9. Domains for 4i01:

       1. Domain d4i01a2: 4i01 A:139-207 [228649] Other proteins in same PDB: d4i01a1, d4i01b1 automated match to d1hw5a1 complexed with cmp; mutant

       2. Domain d4i01b2: 4i01 B:139-208 [228651] Other proteins in same PDB: d4i01a1, d4i01b1 automated match to d1hw5a1 complexed with cmp; mutant

    10. Domains for 4i02:

        1. Domain d4i02a2: 4i02 A:139-209 [234748] Other proteins in same PDB: d4i02a1, d4i02b1, d4i02c1, d4i02d1, d4i02e1, d4i02f1 automated match to d4i02e2 complexed with cmp; mutant

        2. Domain d4i02b2: 4i02 B:139-209 [234752] Other proteins in same PDB: d4i02a1, d4i02b1, d4i02c1, d4i02d1, d4i02e1, d4i02f1 automated match to d4i02e2 complexed with cmp; mutant

        3. Domain d4i02c2: 4i02 C:139-209 [234751] Other proteins in same PDB: d4i02a1, d4i02b1, d4i02c1, d4i02d1, d4i02e1, d4i02f1 automated match to d4i02e2 complexed with cmp; mutant

        4. Domain d4i02d2: 4i02 D:139-209 [234753] Other proteins in same PDB: d4i02a1, d4i02b1, d4i02c1, d4i02d1, d4i02e1, d4i02f1 automated match to d4i02e2 complexed with cmp; mutant

        5. Domain d4i02e2: 4i02 E:139-209 [228639] Other proteins in same PDB: d4i02a1, d4i02b1, d4i02c1, d4i02d1, d4i02e1, d4i02f1 automated match to d1hw5a1 complexed with cmp; mutant

        6. Domain d4i02f2: 4i02 F:139-209 [234749] Other proteins in same PDB: d4i02a1, d4i02b1, d4i02c1, d4i02d1, d4i02e1, d4i02f1 automated match to d4i02e2 complexed with cmp; mutant

    11. Domains for 4i09:

        1. Domain d4i09a2: 4i09 A:139-209 [234757] Other proteins in same PDB: d4i09a1, d4i09b1 automated match to d4i09b2 complexed with cmp; mutant

        2. Domain d4i09b2: 4i09 B:139-209 [228643] Other proteins in same PDB: d4i09a1, d4i09b1 automated match to d1hw5a1 complexed with cmp; mutant

    12. Domains for 4i0a:

        1. Domain d4i0aa2: 4i0a A:139-207 [228641] Other proteins in same PDB: d4i0aa1, d4i0ab1 automated match to d1hw5a1 complexed with cmp, gol; mutant

        2. Domain d4i0ab2: 4i0a B:139-208 [234755] Other proteins in same PDB: d4i0aa1, d4i0ab1 automated match to d4i0aa2 complexed with cmp, gol; mutant

    13. Domains for 4i0b:

        1. Domain d4i0ba2: 4i0b A:139-207 [228645] Other proteins in same PDB: d4i0ba1, d4i0bb1 automated match to d1hw5a1 complexed with cmp; mutant

        2. Domain d4i0bb2: 4i0b B:139-208 [228647] Other proteins in same PDB: d4i0ba1, d4i0bb1 automated match to d1hw5a1 complexed with cmp; mutant

12. Helicobacter pylori [TaxId:85962] [189614] (1 PDB entry)

    • Domains for 2xig:

      1. Domain d2xiga_: 2xig A: [170114] automated match to d1mzba_ complexed with cit, zn

      2. Domain d2xigb_: 2xig B: [170115] automated match to d1mzba_ complexed with cit, zn

      3. Domain d2xigc_: 2xig C: [170116] automated match to d1mzba_ complexed with cit, zn

      4. Domain d2xigd_: 2xig D: [170117] automated match to d1mzba_ complexed with cit, zn

13. Human (Homo sapiens) [TaxId:9606] [186924] (7 PDB entries)

    1. Domains for 2a07:

       1. Domain d2a07g_: 2a07 G: [125939] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

       2. Domain d2a07h_: 2a07 H: [125940] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

       3. Domain d2a07i_: 2a07 I: [125941] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

       4. Domain d2a07j_: 2a07 J: [125942] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

       5. Domain d2a07k_: 2a07 K: [125943] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

    2. Domains for 2as5:

       1. Domain d2as5f_: 2as5 F: [127235] Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2 automated match to d1d5va_ protein/DNA complex; complexed with mg

       2. Domain d2as5g_: 2as5 G: [127236] Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2 automated match to d1d5va_ protein/DNA complex; complexed with mg

    3. Domains for 2zme:

       1. Domain d2zmea1: 2zme A:34-175 [207872] automated match to d1u5ta1

       2. Domain d2zmea2: 2zme A:176-250 [207873] automated match to d1u5ta2

    4. Domains for 3cuq:

       1. Domain d3cuqa1: 3cuq A:34-175 [208955] automated match to d1u5ta1

       2. Domain d3cuqa2: 3cuq A:176-252 [208956] automated match to d1u5ta2

    5. Domains for 4avp:

       1. Domain d4avpa_: 4avp A: [219164] automated match to d1duxc_ complexed with edo

       2. Domain d4avpb_: 4avp B: [219165] automated match to d1duxc_ complexed with edo

       3. Domain d4avpc_: 4avp C: [219166] automated match to d1duxc_ complexed with edo

       4. Domain d4avpd_: 4avp D: [219167] automated match to d1duxc_ complexed with edo

    6. Domain for 4irg:

       • Domain d4irga_: 4irg A: [223334] automated match to d1k79a_

    7. Domain for 4irh:

       • Domain d4irha_: 4irh A: [223335] automated match to d1mdmb_

14. Lactobacillus plantarum [TaxId:1590] [189101] (1 PDB entry)

    • Domain for 3k69:

      • Domain d3k69a_: 3k69 A: [179112] automated match to d1ylfa1 complexed with dms

15. Lactococcus lactis [TaxId:416870] [188710] (3 PDB entries)

    1. Domains for 3f8b:

       1. Domain d3f8ba_: 3f8b A: [175565] automated match to d1xmab_

       2. Domain d3f8bb_: 3f8b B: [175566] automated match to d1xmab_

    2. Domain for 3f8c:

       • Domain d3f8ca_: 3f8c A: [196111] automated match to d3f8ba_ complexed with ht1

    3. Domains for 3f8f:

       1. Domain d3f8fa_: 3f8f A: [209824] automated match to d3f8ca_ complexed with dm1

       2. Domain d3f8fb_: 3f8f B: [209825] automated match to d3f8ca_ complexed with dm1

16. Linum nodiflorum [TaxId:407264] [234362] (1 PDB entry)

    • Domain for 4e70:

      • Domain d4e70a1: 4e70 A:1-112 [234363] Other proteins in same PDB: d4e70a2 automated match to d1zgaa1 complexed with gol, n7i

17. Lolium perenne [TaxId:4522] [226053] (3 PDB entries)

    1. Domain for 3p9c:

       • Domain d3p9ca1: 3p9c A:9-116 [214710] Other proteins in same PDB: d3p9ca2 automated match to d1kyze1 complexed with act, dtv, edo, sah

    2. Domains for 3p9i:

       1. Domain d3p9ia1: 3p9i A:4-116 [214714] Other proteins in same PDB: d3p9ia2, d3p9ib2, d3p9ic2, d3p9id2 automated match to d1kyze1 complexed with bme, sah, sny

       2. Domain d3p9ib1: 3p9i B:5-116 [214716] Other proteins in same PDB: d3p9ia2, d3p9ib2, d3p9ic2, d3p9id2 automated match to d1kyze1 complexed with bme, sah, sny

       3. Domain d3p9ic1: 3p9i C:4-116 [214718] Other proteins in same PDB: d3p9ia2, d3p9ib2, d3p9ic2, d3p9id2 automated match to d1kyze1 complexed with bme, sah, sny

       4. Domain d3p9id1: 3p9i D:10-116 [214720] Other proteins in same PDB: d3p9ia2, d3p9ib2, d3p9ic2, d3p9id2 automated match to d1kyze1 complexed with bme, sah, sny

    3. Domains for 3p9k:

       1. Domain d3p9ka1: 3p9k A:4-116 [214722] Other proteins in same PDB: d3p9ka2, d3p9kb2, d3p9kc2, d3p9kd2 automated match to d1kyze1 complexed with ciy, sah

       2. Domain d3p9kb1: 3p9k B:5-116 [214724] Other proteins in same PDB: d3p9ka2, d3p9kb2, d3p9kc2, d3p9kd2 automated match to d1kyze1 complexed with ciy, sah

       3. Domain d3p9kc1: 3p9k C:4-116 [214726] Other proteins in same PDB: d3p9ka2, d3p9kb2, d3p9kc2, d3p9kd2 automated match to d1kyze1 complexed with ciy, sah

       4. Domain d3p9kd1: 3p9k D:10-116 [214728] Other proteins in same PDB: d3p9ka2, d3p9kb2, d3p9kc2, d3p9kd2 automated match to d1kyze1 complexed with ciy, sah

18. Medicago truncatula [TaxId:3880] [225107] (5 PDB entries)

    1. Domain for 1zg3:

       • Domain d1zg3a1: 1zg3 A:7-116 [203321] Other proteins in same PDB: d1zg3a2 automated match to d1fp2a1 complexed with 2hi, sah

    2. Domain for 1zga:

       • Domain d1zgaa1: 1zga A:8-116 [203324] Other proteins in same PDB: d1zgaa2 automated match to d1fp2a1 complexed with hmk, sah

    3. Domain for 1zgj:

       • Domain d1zgja1: 1zgj A:11-116 [203326] Other proteins in same PDB: d1zgja2 automated match to d1fp2a1 complexed with p1s, sah

    4. Domain for 1zhf:

       • Domain d1zhfa1: 1zhf A:8-116 [203328] Other proteins in same PDB: d1zhfa2 automated match to d1fp2a1 complexed with sah

    5. Domains for 2qyo:

       1. Domain d2qyoa1: 2qyo A:5-113 [205901] Other proteins in same PDB: d2qyoa2, d2qyob2 automated match to d1fp2a1 complexed with k, qso, sah

       2. Domain d2qyob1: 2qyo B:6-113 [205903] Other proteins in same PDB: d2qyoa2, d2qyob2 automated match to d1fp2a1 complexed with k, qso, sah

19. Methanobacterium thermoautotrophicum [TaxId:145262] [225456] (2 PDB entries)

    1. Domain for 3bpv:

       • Domain d3bpva_: 3bpv A: [208690] automated match to d2ethb_

    2. Domains for 3bpx:

       1. Domain d3bpxa_: 3bpx A: [208691] automated match to d2ethb_ complexed with na, sal

       2. Domain d3bpxb_: 3bpx B: [208692] automated match to d2ethb_ complexed with na, sal

20. Mouse (Mus musculus) [TaxId:10090] [189892] (1 PDB entry)

    • Domains for 3qu3:

      1. Domain d3qu3a_: 3qu3 A: [184626] automated match to d1t2ka_ complexed with edo, na

      2. Domain d3qu3b_: 3qu3 B: [184627] automated match to d1t2ka_ complexed with edo, na

      3. Domain d3qu3c_: 3qu3 C: [184628] automated match to d1t2ka_ complexed with edo, na

21. Mycobacterium tuberculosis [TaxId:1773] [187939] (3 PDB entries)

    1. Domain for 2o03:

       • Domain d2o03a_: 2o03 A: [166480] automated match to d1mzba_ complexed with zn

    2. Domains for 3d0s:

       1. Domain d3d0sa2: 3d0s A:145-224 [231921] Other proteins in same PDB: d3d0sa1, d3d0sb1 automated match to d3r6sd2 complexed with cl

       2. Domain d3d0sb2: 3d0s B:145-215 [231922] Other proteins in same PDB: d3d0sa1, d3d0sb1 automated match to d3r6sd2 complexed with cl

    3. Domain for 3i54:

       • Domain d3i54b2: 3i54 B:145-223 [232549] Other proteins in same PDB: d3i54a1, d3i54b1 automated match to d3r6sd2 protein/DNA complex; complexed with cmp

22. Mycobacterium tuberculosis [TaxId:83332] [232395] (2 PDB entries)

    1. Domains for 3h3u:

       1. Domain d3h3ua2: 3h3u A:145-224 [232405] Other proteins in same PDB: d3h3ua1, d3h3ub1 automated match to d3r6sd2 complexed with cmp, so4

       2. Domain d3h3ub2: 3h3u B:145-214 [232399] Other proteins in same PDB: d3h3ua1, d3h3ub1 automated match to d3r6sd2 complexed with cmp, so4

    2. Domains for 3mzh:

       1. Domain d3mzha2: 3mzh A:145-224 [232964] Other proteins in same PDB: d3mzha1, d3mzhb1 automated match to d3r6sd2 protein/DNA complex; complexed with cmp

       2. Domain d3mzhb2: 3mzh B:145-224 [232965] Other proteins in same PDB: d3mzha1, d3mzhb1 automated match to d3r6sd2 protein/DNA complex; complexed with cmp

23. Neisseria meningitidis [TaxId:122586] [231118] (1 PDB entry)

    • Domains for 2p5v:

      1. Domain d2p5va1: 2p5v A:3-65 [231122] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      2. Domain d2p5vb1: 2p5v B:3-65 [231119] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      3. Domain d2p5vc1: 2p5v C:5-65 [231124] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      4. Domain d2p5vd1: 2p5v D:3-65 [231134] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      5. Domain d2p5ve1: 2p5v E:3-65 [231130] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      6. Domain d2p5vf1: 2p5v F:5-65 [231132] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      7. Domain d2p5vg1: 2p5v G:1-65 [231126] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

      8. Domain d2p5vh1: 2p5v H:5-65 [231127] Other proteins in same PDB: d2p5va2, d2p5vb2, d2p5vc2, d2p5ve2, d2p5vf2, d2p5vg2, d2p5vh2 automated match to d2cyya1 complexed with ca, cl, gol

24. Silicibacter pomeroyi [TaxId:246200] [225430] (2 PDB entries)

    1. Domain for 3cjn:

       • Domain d3cjna_: 3cjn A: [208884] automated match to d2fbha1 complexed with po4

    2. Domains for 3e6m:

       1. Domain d3e6mb_: 3e6m B: [232050] automated match to d3cjna_

       2. Domain d3e6mc_: 3e6m C: [232051] automated match to d3cjna_

25. Silicibacter pomeroyi [TaxId:89184] [232048] (1 PDB entry)

    • Domain for 3e6m:

      • Domain d3e6ma_: 3e6m A: [232049] automated match to d3cjna_

26. Staphylococcus aureus [TaxId:1280] [193082] (5 PDB entries)

    1. Domains for 4hqm:

       1. Domain d4hqma_: 4hqm A: [193083] automated match to d3df8a_ protein/DNA complex; complexed with 17z

       2. Domain d4hqmb_: 4hqm B: [193084] automated match to d3df8a_ protein/DNA complex; complexed with 17z

    2. Domains for 4l9n:

       1. Domain d4l9na_: 4l9n A: [227887] automated match to d3jw4b_ complexed with so4; mutant

       2. Domain d4l9nb_: 4l9n B: [227888] automated match to d3jw4b_ complexed with so4; mutant

    3. Domains for 4l9t:

       1. Domain d4l9ta_: 4l9t A: [235311] automated match to d4l9va_ complexed with so4; mutant

       2. Domain d4l9tb_: 4l9t B: [235312] automated match to d4l9va_ complexed with so4; mutant

    4. Domain for 4l9v:

       • Domain d4l9va_: 4l9v A: [227886] automated match to d3jw4b_ mutant

    5. Domains for 4ld5:

       1. Domain d4ld5a_: 4ld5 A: [235334] automated match to d4ld5d_ complexed with so4; mutant

       2. Domain d4ld5b_: 4ld5 B: [235336] automated match to d4ld5d_ complexed with so4; mutant

       3. Domain d4ld5c_: 4ld5 C: [235337] automated match to d4ld5d_ complexed with so4; mutant

       4. Domain d4ld5d_: 4ld5 D: [227897] automated match to d3jw4b_ complexed with so4; mutant

       5. Domain d4ld5e_: 4ld5 E: [235333] automated match to d4ld5d_ complexed with so4; mutant

       6. Domain d4ld5f_: 4ld5 F: [235332] automated match to d4ld5d_ complexed with so4; mutant

       7. Domain d4ld5g_: 4ld5 G: [235331] automated match to d4ld5d_ complexed with so4; mutant

       8. Domain d4ld5h_: 4ld5 H: [235335] automated match to d4ld5d_ complexed with so4; mutant

27. Staphylococcus aureus [TaxId:158878] [188763] (1 PDB entry)

    • Domains for 3eco:

      1. Domain d3ecoa_: 3eco A: [174833] automated match to d3broa1 complexed with so4

      2. Domain d3ecob_: 3eco B: [174834] automated match to d3broa1 complexed with so4

28. Staphylococcus aureus [TaxId:426430] [225722] (4 PDB entries)

    1. Domains for 3hrm:

       1. Domain d3hrma_: 3hrm A: [211286] automated match to d2bv6a1

       2. Domain d3hrmb_: 3hrm B: [211287] automated match to d2bv6a1

    2. Domains for 3hse:

       1. Domain d3hsea_: 3hse A: [211296] automated match to d2bv6a1

       2. Domain d3hseb_: 3hse B: [211297] automated match to d2bv6a1

    3. Domains for 3hsr:

       1. Domain d3hsra_: 3hsr A: [211298] automated match to d2bv6a1 complexed with act, bt6, gol

       2. Domain d3hsrb_: 3hsr B: [211299] automated match to d2bv6a1 complexed with act, bt6, gol

       3. Domain d3hsrc_: 3hsr C: [211300] automated match to d2bv6a1 complexed with act, bt6, gol

       4. Domain d3hsrd_: 3hsr D: [211301] automated match to d2bv6a1 complexed with act, bt6, gol

    4. Domains for 4gxo:

       1. Domain d4gxoa_: 4gxo A: [222261] automated match to d2bv6a1 complexed with gol; mutant

       2. Domain d4gxob_: 4gxo B: [222262] automated match to d2bv6a1 complexed with gol; mutant

29. Staphylococcus epidermidis [TaxId:176279] [226549] (1 PDB entry)

    • Domains for 4hbl:

      1. Domain d4hbla_: 4hbl A: [222480] automated match to d1jgsa_

      2. Domain d4hblb_: 4hbl B: [222481] automated match to d1jgsa_

      3. Domain d4hblc_: 4hbl C: [222482] automated match to d1jgsa_

      4. Domain d4hbld_: 4hbl D: [222483] automated match to d1jgsa_

30. Streptococcus mutans [TaxId:210007] [189554] (1 PDB entry)

    • Domain for 3l7w:

      • Domain d3l7wa_: 3l7w A: [180067] automated match to d1xmaa_

31. Streptococcus pyogenes [TaxId:198466] [193090] (2 PDB entries)

    1. Domains for 4i7h:

       1. Domain d4i7ha_: 4i7h A: [193092] automated match to d2xigc_ complexed with ni, zn

       2. Domain d4i7hb_: 4i7h B: [193091] automated match to d2xigc_ complexed with ni, zn

    2. Domains for 4lmy:

       1. Domain d4lmya_: 4lmy A: [238169] automated match to d4i7hb_ complexed with zn

       2. Domain d4lmyb_: 4lmy B: [238172] automated match to d4i7hb_ complexed with zn

32. Streptomyces coelicolor [TaxId:1902] [196367] (2 PDB entries)

    1. Domains for 3eyy:

       1. Domain d3eyya_: 3eyy A: [199380] automated match to d3eyyb_ complexed with cl, edo, mli, ni, zn

       2. Domain d3eyyb_: 3eyy B: [196572] automated match to d2o03a_ complexed with cl, edo, mli, ni, zn

    2. Domains for 3mwm:

       1. Domain d3mwma_: 3mwm A: [199901] automated match to d3mwmb_ complexed with zn

       2. Domain d3mwmb_: 3mwm B: [196368] automated match to d2o03a_ complexed with zn

33. Sulfolobus solfataricus [TaxId:273057] [228633] (1 PDB entry)

    • Domains for 4hw0:

      1. Domain d4hw0a_: 4hw0 A: [228634] automated match to d1r7ja_

      2. Domain d4hw0b_: 4hw0 B: [228635] automated match to d1r7ja_

      3. Domain d4hw0c_: 4hw0 C: [234707] automated match to d4hw0a_

34. Sulfolobus tokodaii [TaxId:111955] [230692] (3 PDB entries)
    1. Domain for 2e7w:

       • Domain d2e7wa1: 2e7w A:1-60 [230693] automated match to d2cyya1

    2. Domain for 2e7x:

       • Domain d2e7xa1: 2e7x A:1-60 [230694] Other proteins in same PDB: d2e7xa2 automated match to d2cyya1 complexed with gln, mg

    3. Domain for 2efp:

       • Domain d2efpa1: 2efp A:1-60 [230701] Other proteins in same PDB: d2efpa2 automated match to d2cyya1 complexed with gln, mg

35. Sulfolobus tokodaii [TaxId:273063] [230698] (4 PDB entries)

    1. Domain for 2efn:

       • Domain d2efna1: 2efn A:1-60 [230700] Other proteins in same PDB: d2efna2 automated match to d2cyya1 complexed with mg

    2. Domain for 2efo:

       • Domain d2efoa1: 2efo A:1-60 [230699] Other proteins in same PDB: d2efoa2 automated match to d2cyya1 complexed with mg

    3. Domain for 2efq:

       • Domain d2efqa1: 2efq A:1-60 [230702] Other proteins in same PDB: d2efqa2 automated match to d2cyya1 complexed with gln, mg

    4. Domain for 2pmh:

       • Domain d2pmha1: 2pmh A:1-60 [231161] Other proteins in same PDB: d2pmha2 automated match to d2cyya1 complexed with gln, mg, na

36. Thermoplasma acidophilum [TaxId:2303] [196079] (1 PDB entry)

    • Domains for 3elk:

      1. Domain d3elka_: 3elk A: [199337] automated match to d3elkb_ complexed with cl

      2. Domain d3elkb_: 3elk B: [196080] automated match to d3hhha_ complexed with cl

37. Thermoplasma volcanium [TaxId:50339] [188518] (1 PDB entry)

    • Domain for 3df8:

      • Domain d3df8a_: 3df8 A: [173882] automated match to d1yyva1 complexed with act

38. Thermotoga maritima [TaxId:2336] [225980] (1 PDB entry)

    • Domains for 3k2z:

      1. Domain d3k2za1: 3k2z A:3-71 [212159] Other proteins in same PDB: d3k2za2, d3k2zb2 automated match to d1jhfa1 complexed with gol

      2. Domain d3k2zb1: 3k2z B:3-71 [212161] Other proteins in same PDB: d3k2za2, d3k2zb2 automated match to d1jhfa1 complexed with gol

39. Vibrio cholerae [TaxId:666] [225592] (1 PDB entry)

    • Domains for 2w57:

      1. Domain d2w57a_: 2w57 A: [206628] automated match to d3eyyb_ complexed with zn

      2. Domain d2w57b_: 2w57 B: [206629] automated match to d3eyyb_ complexed with zn

40. Xanthomonas campestris [TaxId:339] [230729] (1 PDB entry)

    • Domains for 2fa5:

      1. Domain d2fa5a_: 2fa5 A: [230730] automated match to d3cjna_ complexed with cl

      2. Domain d2fa5b_: 2fa5 B: [230731] automated match to d3cjna_ complexed with cl

41. Xanthomonas campestris [TaxId:340] [225797] (1 PDB entry)

    • Domains for 3iwz:

      1. Domain d3iwza2: 3iwz A:159-228 [211990] Other proteins in same PDB: d3iwza1, d3iwzb1, d3iwzc1, d3iwzd1 automated match to d2oz6a1

      2. Domain d3iwzb2: 3iwz B:159-228 [211992] Other proteins in same PDB: d3iwza1, d3iwzb1, d3iwzc1, d3iwzd1 automated match to d2oz6a1

      3. Domain d3iwzc2: 3iwz C:159-229 [211994] Other proteins in same PDB: d3iwza1, d3iwzb1, d3iwzc1, d3iwzd1 automated match to d2oz6a1

      4. Domain d3iwzd2: 3iwz D:159-229 [211996] Other proteins in same PDB: d3iwza1, d3iwzb1, d3iwzc1, d3iwzd1 automated match to d2oz6a1

More info for Protein automated matches from a.4.5.0: automated matches

Timeline for Protein automated matches from a.4.5.0: automated matches:

• Protein automated matches from a.4.5.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from a.4.5.0: automated matches appears in SCOPe 2.02
  
• Protein automated matches from a.4.5.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from a.4.5.0: automated matches appears in the current release, SCOPe 2.08