Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2156272Fold d.6: Prion-like [54097] (1 superfamily)
    beta-alpha-beta-alpha(2); antiparallel beta-ribbon
  4. 2156273Superfamily d.6.1: Prion-like [54098] (1 family) (S)
  5. 2156274Family d.6.1.1: Prion-like [54099] (3 protein domains)
  6. 2156338Protein automated matches [191016] (9 species)
    not a true protein

Species:

  1. 2156339Cervus elaphus [TaxId:9864] [277421] (1 PDB entry)
  2. 2156341Cow (Bos taurus) [TaxId:9913] [277419] (1 PDB entry)
  3. 2156343Golden hamster (Mesocricetus auratus) [TaxId:10036] [255433] (1 PDB entry)
  4. 2156345Horse (Equus caballus) [TaxId:9796] [255378] (1 PDB entry)
  5. 2156347Human (Homo sapiens) [TaxId:9606] [188783] (8 PDB entries)
    1. Domain for 2k1d:
    2. Domain for 2w9e:
    3. Domain for 3haf:
    4. Domain for 3hak:
    5. Domains for 3her:
      1. 2156349Domain d3hera_: 3her A: [246491]
        automated match to d1fo7a_
        complexed with cd
      2. 2156350Domain d3herb_: 3her B: [246492]
        automated match to d1fo7a_
        complexed with cd
    6. Domains for 3hj5:
      1. 2156355Domain d3hj5a_: 3hj5 A: [246498]
        automated match to d1fo7a_
      2. 2156356Domain d3hj5b_: 3hj5 B: [246499]
        automated match to d1fo7a_
    7. Domain for 3hjx:
    8. Domain for 4dgi:
  6. 2156358Mouse (Mus musculus) [TaxId:10090] [234629] (12 PDB entries)
    1. Domain for 2k5o:
    2. Domain for 2kfm:
    3. Domain for 2kfo:
    4. Domain for 2ku5:
    5. Domain for 2ku6:
    6. Domain for 2l1d:
    7. Domain for 2l1e:
    8. Domain for 2l1h:
    9. Domain for 2l1k:
    10. Domain for 2l39:
    11. Domain for 2l40:
    12. Domain for 4h88:
  7. 2156371Myodes glareolus [TaxId:447135] [255321] (1 PDB entry)
  8. 2156373Odocoileus hemionus [TaxId:9872] [277423] (1 PDB entry)
  9. 2156375Rabbit (Oryctolagus cuniculus) [TaxId:9986] [226669] (6 PDB entries)
    1. Domain for 2fj3:
    2. Domain for 2joh:
    3. Domain for 2jom:
    4. Domains for 4hls:
      1. 2156376Domain d4hlsa_: 4hls A: [222660]
        automated match to d1xywa_
        complexed with cl, gol, na; mutant
      2. 2156377Domain d4hlsb_: 4hls B: [222661]
        automated match to d1xywa_
        complexed with cl, gol, na; mutant
    5. Domains for 4hmm:
      1. 2156378Domain d4hmma_: 4hmm A: [222673]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant
      2. 2156379Domain d4hmmb_: 4hmm B: [222674]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant
    6. Domains for 4hmr:
      1. 2156380Domain d4hmra_: 4hmr A: [222675]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant
      2. 2156381Domain d4hmrb_: 4hmr B: [222676]
        automated match to d1fo7a_
        complexed with cl, gol, na; mutant

More info for Protein automated matches from d.6.1.1: Prion-like

Timeline for Protein automated matches from d.6.1.1: Prion-like: