PDB entry 4yxh
View 4yxh on RCSB PDB site
Description: Crystal structure of Deer prion protein complexed with POM1 FAB
Class: immune system
Keywords: prion, antibody, Immune system complex, IMMUNE SYSTEM
Deposited on
2015-03-23, released
2015-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated
2015-10-14, with a file datestamp of
2015-10-09.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: major prion protein
Species: Odocoileus hemionus [TaxId:9872]
Gene: PRNP, PRP
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4yxha_ - Chain 'H':
Compound: POM1 Fab Heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4yxhh1, d4yxhh2 - Chain 'L':
Compound: POM1 Fab Light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4yxhl1, d4yxhl2 - Heterogens: NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4yxhA (A:)
mgsshhhhhhssglvprgshmledphmvvgglggymlgsamnrplihfgndyedryyren
myrypnqvyyrpvdqynnqntfvhdcvnitvkqhtvttttkgenftetdikmmervveqm
citqyqresqayyqr
Sequence, based on observed residues (ATOM records): (download)
>4yxhA (A:)
lggymlgsamnrplihfgndyedryyrenmyrypnqvyyrpvdqynnqntfvhdcvnitv
kqhtvttttkgenftetdikmmervveqmcitqyqresqay
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>4yxhH (H:)
qvqlqqsgtelvmpgasvkmsckasgytftdywmhwvkqrpgqglewigsidpsdsytsh
nekfkgkatltvdessstaymqlssltsedsavyfcsrsgygyyameywgqgtsvtvssa
kttppsvyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdly
tlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>4yxhL (L:)
divltqspailsvspgervsfscrasqnigtsihwyqqrtnesprliikyasesisgips
rfsgsgsgtdftlsinsvesediadyycqqsntwpytfgggtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysmsstlt
ltkdeyerhntytceathktstspivksfnrne