Lineage for Family d.6.1.1: Prion-like

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2498997Fold d.6: Prion-like [54097] (1 superfamily)
    beta-alpha-beta-alpha(2); antiparallel beta-ribbon
  4. 2498998Superfamily d.6.1: Prion-like [54098] (1 family) (S)
  5. 2498999Family d.6.1.1: Prion-like [54099] (3 protein domains)

Protein Domains:

  1. 2499000Prion protein domain [54100] (14 species)
    1. 2499001Species African clawed frog (Xenopus laevis) [TaxId:8355] [117768] (1 PDB entry)
      Uniprot Q5S1W7 43-171
    2. 2499003Species American elk (Cervus elaphus nelsoni) [TaxId:9864] [117765] (1 PDB entry)
    3. 2499005Species Cat (Felis catus) [TaxId:9685] [117769] (1 PDB entry)
      Uniprot O18754 104-214
    4. 2499007Species Chicken (Gallus gallus) [TaxId:9031] [117766] (1 PDB entry)
      Uniprot P27177 132-248
    5. 2499009Species Cow (Bos taurus) [TaxId:9913] [54104] (4 PDB entries)
    6. 2499014Species Dog (Canis familiaris) [TaxId:9615] [117770] (1 PDB entry)
      Uniprot O46501 124-233
    7. 2499016Species Golden hamster (Mesocricetus auratus) [TaxId:10036] [54102] (1 PDB entry)
    8. 2499018Species Human (Homo sapiens) [TaxId:9606] [54103] (18 PDB entries)
    9. 2499037Species Macropus eugenii [TaxId:9315] [255344] (1 PDB entry)
    10. 2499039Species Mouse (Mus musculus) [TaxId:10090] [54101] (4 PDB entries)
      Uniprot P04925 120-231
    11. 2499044Species Pig (Sus scrofa) [TaxId:9823] [117771] (1 PDB entry)
      Uniprot P49927 125-235
    12. 2499046Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [189522] (1 PDB entry)
    13. 2499049Species Red-eared slider turtle (Trachemys scripta) [TaxId:34903] [117767] (1 PDB entry)
      Uniprot Q9I9C0 141-248
    14. 2499051Species Sheep (Ovis aries) [TaxId:9940] [102729] (6 PDB entries)
      Uniprot P23907 124-234 ! Uniprot P23907 122-234 ! Uniprot P23907 127-228
  2. 2499058Prion-like protein Doppel [64207] (2 species)
    1. 2499059Species Human (Homo sapiens) [TaxId:9606] [82572] (1 PDB entry)
    2. 2499061Species Mouse (Mus musculus) [TaxId:10090] [64208] (1 PDB entry)
  3. 2499063automated matches [191016] (9 species)
    not a true protein
    1. 2499064Species Cervus elaphus [TaxId:9864] [277421] (1 PDB entry)
    2. 2499066Species Cow (Bos taurus) [TaxId:9913] [277419] (1 PDB entry)
    3. 2499068Species Golden hamster (Mesocricetus auratus) [TaxId:10036] [255433] (1 PDB entry)
    4. 2499070Species Horse (Equus caballus) [TaxId:9796] [255378] (1 PDB entry)
    5. 2499072Species Human (Homo sapiens) [TaxId:9606] [188783] (8 PDB entries)
    6. 2499083Species Mouse (Mus musculus) [TaxId:10090] [234629] (13 PDB entries)
    7. 2499096Species Myodes glareolus [TaxId:447135] [255321] (1 PDB entry)
    8. 2499098Species Odocoileus hemionus [TaxId:9872] [277423] (1 PDB entry)
    9. 2499100Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [226669] (6 PDB entries)

More info for Family d.6.1.1: Prion-like

Timeline for Family d.6.1.1: Prion-like: