Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2155703Fold d.5: RNase A-like [54075] (1 superfamily)
    contains long curved beta-sheet and 3 helices
  4. 2155704Superfamily d.5.1: RNase A-like [54076] (2 families) (S)
    can be classified as disulfide-rich
  5. 2155705Family d.5.1.1: Ribonuclease A-like [54077] (9 protein domains)
  6. 2156099Protein automated matches [190061] (7 species)
    not a true protein

Species:

  1. 2156100Bullfrog (Rana catesbeiana) [TaxId:8400] [255002] (1 PDB entry)
  2. 2156102Cow (Bos taurus) [TaxId:9913] [186780] (71 PDB entries)
    1. Domain for 1o0g:
    2. Domains for 1u1b:
      1. 2156201Domain d1u1ba_: 1u1b A: [119419]
        automated match to d1a2wa_
        complexed with pax
      2. 2156202Domain d1u1bb_: 1u1b B: [119420]
        automated match to d1a2wa_
        complexed with pax
    3. Domains for 1w4o:
      1. 2156157Domain d1w4oa_: 1w4o A: [120633]
        automated match to d1a2wa_
        complexed with ua3
      2. 2156158Domain d1w4ob_: 1w4o B: [120634]
        automated match to d1a2wa_
        complexed with ua3
    4. Domains for 1w4p:
      1. 2156167Domain d1w4pa_: 1w4p A: [120635]
        automated match to d1a2wa_
        complexed with um3
      2. 2156168Domain d1w4pb_: 1w4p B: [120636]
        automated match to d1a2wa_
        complexed with um3
    5. Domains for 1w4q:
      1. 2156165Domain d1w4qa_: 1w4q A: [120637]
        automated match to d1a2wa_
        complexed with umf
      2. 2156166Domain d1w4qb_: 1w4q B: [120638]
        automated match to d1a2wa_
        complexed with umf
    6. Domains for 1wbu:
      1. 2156190Domain d1wbua_: 1wbu A: [120862]
        automated match to d1a2wa_
        complexed with wbu
      2. 2156191Domain d1wbub_: 1wbu B: [120863]
        automated match to d1a2wa_
        complexed with wbu
    7. Domains for 1z6d:
      1. 2156124Domain d1z6da_: 1z6d A: [124516]
        automated match to d1a2wa_
        complexed with imp
      2. 2156125Domain d1z6db_: 1z6d B: [124517]
        automated match to d1a2wa_
        complexed with imp
    8. Domains for 1z6s:
      1. 2156122Domain d1z6sa_: 1z6s A: [124569]
        automated match to d1a2wa_
        complexed with amp
      2. 2156123Domain d1z6sb_: 1z6s B: [124570]
        automated match to d1a2wa_
        complexed with amp
    9. Domain for 2blp:
    10. Domain for 2blz:
    11. Domain for 2e33:
    12. Domain for 2e3w:
    13. Domains for 2g4w:
      1. 2156194Domain d2g4wa_: 2g4w A: [134613]
        automated match to d1a2wa_
        complexed with cl, so4
      2. 2156195Domain d2g4wb_: 2g4w B: [134614]
        automated match to d1a2wa_
        complexed with cl, so4
    14. Domain for 2g4x:
    15. Domains for 2g8q:
      1. 2156120Domain d2g8qa_: 2g8q A: [134781]
        automated match to d1a2wa_
      2. 2156121Domain d2g8qb_: 2g8q B: [134782]
        automated match to d1a2wa_
    16. Domains for 2g8r:
      1. 2156155Domain d2g8ra_: 2g8r A: [134783]
        automated match to d1a2wa_
        complexed with n3e
      2. 2156156Domain d2g8rb_: 2g8r B: [134784]
        automated match to d1a2wa_
        complexed with n3e
    17. Domain for 2op2:
    18. Domains for 2p42:
      1. 2156163Domain d2p42a_: 2p42 A: [149194]
        Other proteins in same PDB: d2p42b_, d2p42d_
        automated match to d1a2wa_
        protein/RNA complex; complexed with mg
      2. 2156164Domain d2p42c_: 2p42 C: [149196]
        Other proteins in same PDB: d2p42b_, d2p42d_
        automated match to d1a2wa_
        protein/RNA complex; complexed with mg
    19. Domain for 2p43:
    20. Domain for 2p44:
    21. Domain for 2p45:
    22. Domains for 2p46:
      1. 2156212Domain d2p46a_: 2p46 A: [149202]
        Other proteins in same PDB: d2p46b_, d2p46d_
        automated match to d1a2wa_
        protein/RNA complex; complexed with zn
      2. 2156213Domain d2p46c_: 2p46 C: [149203]
        Other proteins in same PDB: d2p46b_, d2p46d_
        automated match to d1a2wa_
        protein/RNA complex; complexed with zn
    23. Domain for 2p47:
    24. Domain for 2p48:
    25. Domain for 2p49:
    26. Domains for 2p4a:
      1. 2156185Domain d2p4aa_: 2p4a A: [149208]
        Other proteins in same PDB: d2p4ab_, d2p4ad_
        automated match to d1a2wa_
        protein/RNA complex; complexed with so4
      2. 2156186Domain d2p4ac_: 2p4a C: [149209]
        Other proteins in same PDB: d2p4ab_, d2p4ad_
        automated match to d1a2wa_
        protein/RNA complex; complexed with so4
    27. Domain for 2qca:
    28. Domains for 2w5g:
      1. 2156161Domain d2w5ga_: 2w5g A: [169063]
        automated match to d1a2wa_
        protein/RNA complex; complexed with atp
      2. 2156162Domain d2w5gb_: 2w5g B: [169064]
        automated match to d1a2wa_
        protein/RNA complex; complexed with atp
    29. Domains for 2w5i:
      1. 2156207Domain d2w5ia_: 2w5i A: [169066]
        automated match to d1a2wa_
        protein/RNA complex; complexed with atp
      2. 2156208Domain d2w5ib_: 2w5i B: [169067]
        automated match to d1a2wa_
        protein/RNA complex; complexed with atp
    30. Domains for 2w5k:
      1. 2156140Domain d2w5ka_: 2w5k A: [169068]
        automated match to d1a2wa_
        protein/RNA complex; complexed with ndp
      2. 2156141Domain d2w5kb_: 2w5k B: [169069]
        automated match to d1a2wa_
        protein/RNA complex; complexed with ndp
    31. Domains for 2w5l:
      1. 2156151Domain d2w5la_: 2w5l A: [169070]
        automated match to d1a2wa_
        protein/RNA complex; complexed with nap
      2. 2156152Domain d2w5lb_: 2w5l B: [169071]
        automated match to d1a2wa_
        protein/RNA complex; complexed with nap
    32. Domains for 2w5m:
      1. 2156171Domain d2w5ma_: 2w5m A: [169072]
        automated match to d1a2wa_
        protein/RNA complex; complexed with pop
      2. 2156172Domain d2w5mb_: 2w5m B: [169073]
        automated match to d1a2wa_
        protein/RNA complex; complexed with pop
    33. Domains for 2xog:
      1. 2156173Domain d2xoga_: 2xog A: [170257]
        automated match to d1a2wa_
        complexed with sfb
      2. 2156174Domain d2xogb_: 2xog B: [170258]
        automated match to d1a2wa_
        complexed with sfb
    34. Domains for 2xoi:
      1. 2156176Domain d2xoia_: 2xoi A: [170259]
        automated match to d1a2wa_
        complexed with sfb
      2. 2156177Domain d2xoib_: 2xoi B: [170260]
        automated match to d1a2wa_
        complexed with sfb
    35. Domain for 3a1r:
    36. Domains for 3d6o:
      1. 2156134Domain d3d6oa_: 3d6o A: [173717]
        automated match to d1a2wa_
        complexed with u1s
      2. 2156135Domain d3d6ob_: 3d6o B: [173718]
        automated match to d1a2wa_
        complexed with u1s
    37. Domains for 3d6p:
      1. 2156136Domain d3d6pa_: 3d6p A: [173719]
        automated match to d1a2wa_
        complexed with u2s
      2. 2156137Domain d3d6pb_: 3d6p B: [173720]
        automated match to d1a2wa_
        complexed with u2s
    38. Domains for 3d6q:
      1. 2156132Domain d3d6qa_: 3d6q A: [173721]
        automated match to d1a2wa_
        complexed with flc, u3s
      2. 2156133Domain d3d6qb_: 3d6q B: [173722]
        automated match to d1a2wa_
        complexed with flc, u3s
    39. Domains for 3d7b:
      1. 2156130Domain d3d7ba_: 3d7b A: [173742]
        automated match to d1a2wa_
        complexed with flc, u4s
      2. 2156131Domain d3d7bb_: 3d7b B: [173743]
        automated match to d1a2wa_
        complexed with flc, u4s
    40. Domains for 3d8y:
      1. 2156196Domain d3d8ya_: 3d8y A: [173756]
        automated match to d1a2wa_
        complexed with flc, t3s
      2. 2156197Domain d3d8yb_: 3d8y B: [173757]
        automated match to d1a2wa_
        complexed with flc, t3s
    41. Domains for 3d8z:
      1. 2156205Domain d3d8za_: 3d8z A: [173758]
        automated match to d1a2wa_
        complexed with flc, txs
      2. 2156206Domain d3d8zb_: 3d8z B: [173759]
        automated match to d1a2wa_
        complexed with flc, txs
    42. Domains for 3djo:
      1. 2156142Domain d3djoa_: 3djo A: [173997]
        automated match to d11baa_
        complexed with act, u2p
      2. 2156143Domain d3djob_: 3djo B: [173998]
        automated match to d11baa_
        complexed with act, u2p
    43. Domains for 3djp:
      1. 2156149Domain d3djpa_: 3djp A: [173999]
        automated match to d11baa_
        complexed with ua3
      2. 2156150Domain d3djpb_: 3djp B: [174000]
        automated match to d11baa_
        complexed with ua3
    44. Domains for 3djq:
      1. 2156126Domain d3djqa_: 3djq A: [174001]
        automated match to d11baa_
        complexed with udp
      2. 2156127Domain d3djqb_: 3djq B: [174002]
        automated match to d11baa_
        complexed with udp
    45. Domains for 3djv:
      1. 2156128Domain d3djva_: 3djv A: [174010]
        automated match to d11baa_
        complexed with c3p
      2. 2156129Domain d3djvb_: 3djv B: [174011]
        automated match to d11baa_
        complexed with c3p
    46. Domains for 3djx:
      1. 2156144Domain d3djxa_: 3djx A: [174012]
        automated match to d11baa_
        complexed with c5p
      2. 2156145Domain d3djxb_: 3djx B: [174013]
        automated match to d11baa_
        complexed with c5p
    47. Domains for 3dxg:
      1. 2156115Domain d3dxga_: 3dxg A: [174323]
        automated match to d1a2wa_
        complexed with u5p
      2. 2156116Domain d3dxgb_: 3dxg B: [174324]
        automated match to d1a2wa_
        complexed with u5p
    48. Domains for 3dxh:
      1. 2156113Domain d3dxha_: 3dxh A: [174325]
        automated match to d1a2wa_
        complexed with udp
      2. 2156114Domain d3dxhb_: 3dxh B: [174326]
        automated match to d1a2wa_
        complexed with udp
    49. Domains for 3eux:
      1. 2156153Domain d3euxa_: 3eux A: [175224]
        automated match to d1a2wa_
      2. 2156154Domain d3euxb_: 3eux B: [175225]
        automated match to d1a2wa_
    50. Domains for 3euy:
      1. 2156192Domain d3euya_: 3euy A: [175226]
        automated match to d1a2wa_
        complexed with dio
      2. 2156193Domain d3euyb_: 3euy B: [175227]
        automated match to d1a2wa_
        complexed with dio
    51. Domains for 3euz:
      1. 2156183Domain d3euza_: 3euz A: [175228]
        automated match to d1a2wa_
        complexed with dmf
      2. 2156184Domain d3euzb_: 3euz B: [175229]
        automated match to d1a2wa_
        complexed with dmf
    52. Domains for 3ev0:
      1. 2156178Domain d3ev0a_: 3ev0 A: [175230]
        automated match to d1a2wa_
        complexed with dms
      2. 2156179Domain d3ev0b_: 3ev0 B: [175231]
        automated match to d1a2wa_
        complexed with dms
    53. Domains for 3ev1:
      1. 2156203Domain d3ev1a_: 3ev1 A: [175232]
        automated match to d1a2wa_
        complexed with hez
      2. 2156204Domain d3ev1b_: 3ev1 B: [175233]
        automated match to d1a2wa_
        complexed with hez
    54. Domains for 3ev2:
      1. 2156198Domain d3ev2a_: 3ev2 A: [175234]
        automated match to d1a2wa_
        complexed with ipa
      2. 2156199Domain d3ev2b_: 3ev2 B: [175235]
        automated match to d1a2wa_
        complexed with ipa
    55. Domains for 3ev3:
      1. 2156159Domain d3ev3a_: 3ev3 A: [175236]
        automated match to d1a2wa_
        complexed with tbu
      2. 2156160Domain d3ev3b_: 3ev3 B: [175237]
        automated match to d1a2wa_
        complexed with tbu
    56. Domains for 3ev4:
      1. 2156188Domain d3ev4a_: 3ev4 A: [175238]
        automated match to d1a2wa_
        complexed with etf
      2. 2156189Domain d3ev4b_: 3ev4 B: [175239]
        automated match to d1a2wa_
        complexed with etf
    57. Domains for 3ev5:
      1. 2156169Domain d3ev5a_: 3ev5 A: [175240]
        automated match to d1a2wa_
        complexed with tmo
      2. 2156170Domain d3ev5b_: 3ev5 B: [175241]
        automated match to d1a2wa_
        complexed with tmo
    58. Domains for 3ev6:
      1. 2156181Domain d3ev6a_: 3ev6 A: [175242]
        automated match to d1a2wa_
        complexed with rsf
      2. 2156182Domain d3ev6b_: 3ev6 B: [175243]
        automated match to d1a2wa_
        complexed with rsf
    59. Domain for 3i67:
    60. Domain for 3i6f:
    61. Domain for 3i6h:
    62. Domain for 3i6j:
    63. Domain for 3i7w:
    64. Domain for 3i7x:
    65. Domain for 3i7y:
    66. Domains for 3jw1:
      1. 2156146Domain d3jw1a_: 3jw1 A: [178855]
        automated match to d1a2wa_
        complexed with u5p
      2. 2156147Domain d3jw1b_: 3jw1 B: [178856]
        automated match to d1a2wa_
        complexed with u5p
    67. Domain for 3lxo:
    68. Domain for 3mzq:
    69. Domain for 3mzr:
    70. Domain for 3qsk:
    71. Domain for 4k7m:
  3. 2156218Frog (Rana pipiens) [TaxId:8404] [188156] (4 PDB entries)
    1. Domain for 1yv7:
    2. Domain for 2kb6:
    3. Domains for 3fd7:
      1. 2156220Domain d3fd7a_: 3fd7 A: [175705]
        automated match to d1onca_
        complexed with edo, gol, so4
      2. 2156221Domain d3fd7b_: 3fd7 B: [175706]
        automated match to d1onca_
        complexed with edo, gol, so4
    4. Domain for 3u01:
  4. 2156224Human (Homo sapiens) [TaxId:9606] [186903] (7 PDB entries)
    1. Domains for 2e0j:
      1. 2156225Domain d2e0ja_: 2e0j A: [163783]
        automated match to d1dzaa_
        mutant
      2. 2156226Domain d2e0jb_: 2e0j B: [163784]
        automated match to d1dzaa_
        mutant
    2. Domains for 2e0l:
      1. 2156227Domain d2e0la_: 2e0l A: [163785]
        automated match to d1dzaa_
        complexed with cd, cl; mutant
      2. 2156228Domain d2e0lb_: 2e0l B: [163786]
        automated match to d1dzaa_
        complexed with cd, cl; mutant
    3. Domains for 2e0m:
      1. 2156230Domain d2e0ma_: 2e0m A: [163787]
        automated match to d1dzaa_
        complexed with cd, cl; mutant
      2. 2156231Domain d2e0mb_: 2e0m B: [163788]
        automated match to d1dzaa_
        complexed with cd, cl; mutant
    4. Domains for 2e0o:
      1. 2156234Domain d2e0oa_: 2e0o A: [163789]
        Other proteins in same PDB: d2e0ob2
        automated match to d1dzaa_
        complexed with gol, so4; mutant
      2. 2156235Domain d2e0ob1: 2e0o B:1-124 [163790]
        Other proteins in same PDB: d2e0ob2
        automated match to d1dzaa_
        complexed with gol, so4; mutant
    5. Domain for 4ahj:
    6. Domains for 4b36:
      1. 2156232Domain d4b36a_: 4b36 A: [201562]
        automated match to d4b36b_
        complexed with cl
      2. 2156233Domain d4b36b_: 4b36 B: [194194]
        automated match to d1a4yb_
        complexed with cl
    7. Domain for 5e13:
  5. 2156237Mouse (Mus musculus) [TaxId:10090] [187495] (5 PDB entries)
    1. Domain for 2bwk:
    2. Domain for 2bwl:
    3. Domains for 3tsr:
      1. 2156243Domain d3tsra_: 3tsr A: [194678]
        Other proteins in same PDB: d3tsre1, d3tsre2, d3tsrf1, d3tsrf2, d3tsrg1, d3tsrg2, d3tsrh1, d3tsrh2
        automated match to d1rraa_
        complexed with edo, peg
      2. 2156244Domain d3tsrb_: 3tsr B: [200873]
        Other proteins in same PDB: d3tsre1, d3tsre2, d3tsrf1, d3tsrf2, d3tsrg1, d3tsrg2, d3tsrh1, d3tsrh2
        automated match to d3tsra_
        complexed with edo, peg
      3. 2156245Domain d3tsrc_: 3tsr C: [200874]
        Other proteins in same PDB: d3tsre1, d3tsre2, d3tsrf1, d3tsrf2, d3tsrg1, d3tsrg2, d3tsrh1, d3tsrh2
        automated match to d3tsra_
        complexed with edo, peg
      4. 2156246Domain d3tsrd_: 3tsr D: [200875]
        Other proteins in same PDB: d3tsre1, d3tsre2, d3tsrf1, d3tsrf2, d3tsrg1, d3tsrg2, d3tsrh1, d3tsrh2
        automated match to d3tsra_
        complexed with edo, peg
    4. Domain for 3zbv:
    5. Domains for 3zbw:
      1. 2156241Domain d3zbwa_: 3zbw A: [194169]
        automated match to d2bwla_
        complexed with acy, so4, zn
      2. 2156242Domain d3zbwb_: 3zbw B: [194168]
        automated match to d2bwla_
        complexed with acy, so4, zn
  6. 2156247Norway rat (Rattus norvegicus) [TaxId:10116] [259282] (2 PDB entries)
    1. Domains for 4qfi:
      1. 2156248Domain d4qfia_: 4qfi A: [267306]
        automated match to d4qfja_
        complexed with acy, zn
      2. 2156249Domain d4qfib_: 4qfi B: [267307]
        automated match to d4qfja_
        complexed with acy, zn
    2. Domains for 4qfj:
      1. 2156250Domain d4qfja_: 4qfj A: [259283]
        automated match to d2bwla_
        complexed with acy, h1s, zn
      2. 2156251Domain d4qfjb_: 4qfj B: [263696]
        automated match to d4qfja_
        complexed with acy, h1s, zn
  7. 2269214Sus scrofa [TaxId:9823] [312520] (3 PDB entries)
    1. Domains for 5arj:
      1. 2269215Domain d5arjd1: 5arj D:1-119 [312521]
        Other proteins in same PDB: d5arja2, d5arjc2, d5arjd2
        automated match to d2rnfa_
        mutant
      2. 2269384Domain d5arja1: 5arj A:1-119 [312690]
        Other proteins in same PDB: d5arja2, d5arjc2, d5arjd2
        automated match to d2rnfa_
        mutant
      3. 2269425Domain d5arjb_: 5arj B: [312731]
        Other proteins in same PDB: d5arja2, d5arjc2, d5arjd2
        automated match to d2rnfa_
        mutant
      4. 2269499Domain d5arjc1: 5arj C:1-119 [312805]
        Other proteins in same PDB: d5arja2, d5arjc2, d5arjd2
        automated match to d2rnfa_
        mutant
    2. Domains for 5ark:
      1. 2269217Domain d5arkb_: 5ark B: [312523]
        automated match to d2rnfa_
        protein/RNA complex; complexed with po4, ump
      2. 2269218Domain d5arkc_: 5ark C: [312524]
        automated match to d2rnfa_
        protein/RNA complex; complexed with po4, ump
      3. 2269257Domain d5arka_: 5ark A: [312563]
        automated match to d2rnfa_
        protein/RNA complex; complexed with po4, ump
      4. 2269329Domain d5arkd_: 5ark D: [312635]
        automated match to d2rnfa_
        protein/RNA complex; complexed with po4, ump
    3. Domains for 5arl:
      1. 2269220Domain d5arla1: 5arl A:1-119 [312526]
        Other proteins in same PDB: d5arla2, d5arlb2, d5arlc2, d5arld2
        automated match to d2rnfa_
        protein/RNA complex; complexed with dcm; mutant
      2. 2269244Domain d5arlb1: 5arl B:1-119 [312550]
        Other proteins in same PDB: d5arla2, d5arlb2, d5arlc2, d5arld2
        automated match to d2rnfa_
        protein/RNA complex; complexed with dcm; mutant
      3. 2269280Domain d5arlc1: 5arl C:1-119 [312586]
        Other proteins in same PDB: d5arla2, d5arlb2, d5arlc2, d5arld2
        automated match to d2rnfa_
        protein/RNA complex; complexed with dcm; mutant
      4. 2269304Domain d5arld1: 5arl D:1-119 [312610]
        Other proteins in same PDB: d5arla2, d5arlb2, d5arlc2, d5arld2
        automated match to d2rnfa_
        protein/RNA complex; complexed with dcm; mutant

More info for Protein automated matches from d.5.1.1: Ribonuclease A-like

Timeline for Protein automated matches from d.5.1.1: Ribonuclease A-like: