Lineage for Protein: Concanavalin A

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2042198Family b.29.1.1: Legume lectins [49900] (5 protein domains)
  6. 2042202Protein Concanavalin A [49901] (4 species)
    natural circle permutation: the "old" N- and C-termini are linked with a peptide bond, whereas the "new" ones correspond to a cleaved loop

Species:

  1. 2042203Brazilian jackbean (Canavalia brasiliensis) [TaxId:61861] [49903] (7 PDB entries)
    1. Domains for 1azd:
      1. 2042210Domain d1azda_: 1azd A: [24020]
        complexed with ca, mn
      2. 2042211Domain d1azdb_: 1azd B: [24021]
        complexed with ca, mn
      3. 2042212Domain d1azdc_: 1azd C: [24022]
        complexed with ca, mn
      4. 2042213Domain d1azdd_: 1azd D: [24023]
        complexed with ca, mn
    2. Domain for 3ju9:
    3. Domain for 4dps:
    4. Domain for 4h55:
    5. Domain for 4p14:
    6. Domains for 4pcr:
      1. 2042208Domain d4pcra_: 4pcr A: [271665]
        automated match to d1azda_
        complexed with abu, ca, edo, ipa, mn, peg
      2. 2042209Domain d4pcrd_: 4pcr D: [271664]
        automated match to d1azda_
        complexed with abu, ca, edo, ipa, mn, peg
    7. Domain for 5ygm:
  2. 2042214Canavalia cathartica [TaxId:28958] [224859] (1 PDB entry)
  3. 2042218Canavalia virosa [TaxId:28958] [186936] (3 PDB entries)
    1. Domain for 2a7a:
    2. Domain for 2g4i:
    3. Domain for 3qlq:
  4. 2042222Jack bean (Canavalia ensiformis) [TaxId:3823] [49902] (59 PDB entries)
    Uniprot P81461
    1. Domains for 1apn:
      1. 2042283Domain d1apna_: 1apn A: [23961]
        demetallized, pH 5
      2. 2042284Domain d1apnb_: 1apn B: [23962]
        demetallized, pH 5
    2. Domains for 1bxh:
      1. 2042311Domain d1bxha_: 1bxh A: [23989]
        complexed with ca, mma, mn
      2. 2042312Domain d1bxhb_: 1bxh B: [23990]
        complexed with ca, mma, mn
      3. 2042313Domain d1bxhc_: 1bxh C: [23991]
        complexed with ca, mma, mn
      4. 2042314Domain d1bxhd_: 1bxh D: [23992]
        complexed with ca, mma, mn
    3. Domain for 1c57:
    4. Domains for 1ces:
      1. 2042337Domain d1cesa_: 1ces A: [24006]
        complexed with zn
      2. 2042338Domain d1cesb_: 1ces B: [24007]
        complexed with zn
    5. Domains for 1cjp:
      1. 2042320Domain d1cjpa_: 1cjp A: [23998]
        complexed with ca, mn, mug
      2. 2042321Domain d1cjpb_: 1cjp B: [23999]
        complexed with ca, mn, mug
      3. 2042322Domain d1cjpc_: 1cjp C: [24000]
        complexed with ca, mn, mug
      4. 2042323Domain d1cjpd_: 1cjp D: [24001]
        complexed with ca, mn, mug
    6. Domains for 1cn1:
      1. 2042362Domain d1cn1a_: 1cn1 A: [24018]
      2. 2042363Domain d1cn1b_: 1cn1 B: [24019]
    7. Domain for 1con:
    8. Domains for 1cvn:
      1. 2042277Domain d1cvna_: 1cvn A: [23955]
        complexed with ca, mn
      2. 2042278Domain d1cvnb_: 1cvn B: [23956]
        complexed with ca, mn
      3. 2042279Domain d1cvnc_: 1cvn C: [23957]
        complexed with ca, mn
      4. 2042280Domain d1cvnd_: 1cvn D: [23958]
        complexed with ca, mn
    9. Domain for 1dq0:
    10. Domain for 1dq1:
    11. Domains for 1dq2:
      1. 2042265Domain d1dq2a_: 1dq2 A: [23952]
        complexed with acy
      2. 2042266Domain d1dq2b_: 1dq2 B: [23953]
        complexed with acy
    12. Domains for 1dq4:
      1. 2042354Domain d1dq4a_: 1dq4 A: [24011]
        complexed with mn
      2. 2042355Domain d1dq4b_: 1dq4 B: [24012]
        complexed with mn
    13. Domain for 1dq5:
    14. Domain for 1dq6:
    15. Domains for 1e0i:
      1. 2042229Domain d1e0ia_: 1e0i A: [302356]
        automated match to d1nlsa_
        complexed with ca, mn
      2. 2042230Domain d1e0ib_: 1e0i B: [302357]
        automated match to d1nlsa_
        complexed with ca, mn
    16. Domains for 1enq:
      1. 2042297Domain d1enqa_: 1enq A: [23975]
        complexed with zn
      2. 2042298Domain d1enqb_: 1enq B: [23976]
        complexed with zn
      3. 2042299Domain d1enqc_: 1enq C: [23977]
        complexed with zn
      4. 2042300Domain d1enqd_: 1enq D: [23978]
        complexed with zn
    17. Domain for 1enr:
    18. Domains for 1ens:
      1. 2042347Domain d1ensa_: 1ens A: [24008]
        complexed with co
      2. 2042348Domain d1ensb_: 1ens B: [24009]
        complexed with co
    19. Domains for 1gic:
      1. 2042253Domain d1gica_: 1gic A: [23939]
        complexed with ca, gyp, mn
      2. 2042254Domain d1gicb_: 1gic B: [23940]
        complexed with ca, gyp, mn
    20. Domains for 1gkb:
      1. 2042227Domain d1gkba_: 1gkb A: [60584]
        complexed with ca, mg, mn
      2. 2042228Domain d1gkbb_: 1gkb B: [60585]
        complexed with ca, mg, mn
    21. Domain for 1hqw:
      • 2042272Domain d1hqwa_: 1hqw A: [90659]
        complexed with a tripeptide ypy, chain B
        complexed with ca, mn, ptd
    22. Domain for 1i3h:
      • 2042226Domain d1i3ha_: 1i3h A: [61592]
        complexed with dimannose
        complexed with ca, mn
    23. Domain for 1jbc:
    24. Domain for 1jn2:
    25. Domains for 1joj:
      1. 2042350Domain d1joja_: 1joj A: [66994]
        complexed with a hexapeptide
        complexed with ca, mn
      2. 2042351Domain d1jojb_: 1joj B: [66995]
        complexed with a hexapeptide
        complexed with ca, mn
      3. 2042352Domain d1jojc_: 1joj C: [66996]
        complexed with a hexapeptide
        complexed with ca, mn
      4. 2042353Domain d1jojd_: 1joj D: [66997]
        complexed with a hexapeptide
        complexed with ca, mn
    26. Domains for 1jui:
      1. 2042333Domain d1juia_: 1jui A: [71888]
        complexed with a 10-mer peptide
        complexed with ca, mn
      2. 2042334Domain d1juib_: 1jui B: [71889]
        complexed with a 10-mer peptide
        complexed with ca, mn
      3. 2042335Domain d1juic_: 1jui C: [71890]
        complexed with a 10-mer peptide
        complexed with ca, mn
      4. 2042336Domain d1juid_: 1jui D: [71891]
        complexed with a 10-mer peptide
        complexed with ca, mn
    27. Domain for 1jw6:
      • 2042248Domain d1jw6a_: 1jw6 A: [63309]
        complexed with a hexapeptide
        complexed with ca, ipa, mn, ptd
    28. Domains for 1jyc:
      1. 2042343Domain d1jyca_: 1jyc A: [77208]
        complexed with a carbohydrate-mimicking 15-mer peptide
        complexed with ca, mn
      2. 2042344Domain d1jycb_: 1jyc B: [77209]
        complexed with a carbohydrate-mimicking 15-mer peptide
        complexed with ca, mn
      3. 2042345Domain d1jycc_: 1jyc C: [77210]
        complexed with a carbohydrate-mimicking 15-mer peptide
        complexed with ca, mn
      4. 2042346Domain d1jycd_: 1jyc D: [77211]
        complexed with a carbohydrate-mimicking 15-mer peptide
        complexed with ca, mn
    29. Domains for 1jyi:
      1. 2042339Domain d1jyia_: 1jyi A: [77212]
        complexed with a carbohydrate-mimicking 12-mer peptide
        complexed with ca, mn
      2. 2042340Domain d1jyib_: 1jyi B: [77213]
        complexed with a carbohydrate-mimicking 12-mer peptide
        complexed with ca, mn
      3. 2042341Domain d1jyic_: 1jyi C: [77214]
        complexed with a carbohydrate-mimicking 12-mer peptide
        complexed with ca, mn
      4. 2042342Domain d1jyid_: 1jyi D: [77215]
        complexed with a carbohydrate-mimicking 12-mer peptide
        complexed with ca, mn
    30. Domain for 1nls:
    31. Domains for 1nxd:
      1. 2042239Domain d1nxd1_: 1nxd 1: [92294]
        complexed with azi, gol, mn, na
      2. 2042240Domain d1nxd2_: 1nxd 2: [92295]
        complexed with azi, gol, mn, na
      3. 2042241Domain d1nxd3_: 1nxd 3: [92296]
        complexed with azi, gol, mn, na
      4. 2042242Domain d1nxd4_: 1nxd 4: [92297]
        complexed with azi, gol, mn, na
    32. Domains for 1ona:
      1. 2042293Domain d1onaa_: 1ona A: [23971]
        complexed with ca, mn
      2. 2042294Domain d1onab_: 1ona B: [23972]
        complexed with ca, mn
      3. 2042295Domain d1onac_: 1ona C: [23973]
        complexed with ca, mn
      4. 2042296Domain d1onad_: 1ona D: [23974]
        complexed with ca, mn
    33. Domains for 1qdc:
      1. 2042249Domain d1qdca_: 1qdc A: [23941]
        complexed with ca, cl, mn
      2. 2042250Domain d1qdcb_: 1qdc B: [23942]
        complexed with ca, cl, mn
      3. 2042251Domain d1qdcc_: 1qdc C: [23943]
        complexed with ca, cl, mn
      4. 2042252Domain d1qdcd_: 1qdc D: [23944]
        complexed with ca, cl, mn
    34. Domains for 1qdo:
      1. 2042316Domain d1qdoa_: 1qdo A: [23993]
        complexed with ca, mn
      2. 2042317Domain d1qdob_: 1qdo B: [23994]
        complexed with ca, mn
      3. 2042318Domain d1qdoc_: 1qdo C: [23995]
        complexed with ca, mn
      4. 2042319Domain d1qdod_: 1qdo D: [23996]
        complexed with ca, mn
    35. Domains for 1qgl:
      1. 2042281Domain d1qgla_: 1qgl A: [23959]
        complexed with ca, ejt, mn, sin
      2. 2042282Domain d1qglb_: 1qgl B: [23960]
        complexed with ca, ejt, mn, sin
    36. Domain for 1qny:
    37. Domain for 1scr:
    38. Domain for 1scs:
    39. Domains for 1tei:
      1. 2042303Domain d1teia_: 1tei A: [23979]
        complexed with ca, mn
      2. 2042304Domain d1teib_: 1tei B: [23980]
        complexed with ca, mn
      3. 2042305Domain d1teic_: 1tei C: [23981]
        complexed with ca, mn
      4. 2042306Domain d1teid_: 1tei D: [23982]
        complexed with ca, mn
      5. 2042307Domain d1teie_: 1tei E: [23983]
        complexed with ca, mn
      6. 2042308Domain d1teif_: 1tei F: [23984]
        complexed with ca, mn
      7. 2042309Domain d1teig_: 1tei G: [23985]
        complexed with ca, mn
      8. 2042310Domain d1teih_: 1tei H: [23986]
        complexed with ca, mn
    40. Domains for 1val:
      1. 2042357Domain d1vala_: 1val A: [24013]
        complexed with ca, mn, png
      2. 2042358Domain d1valb_: 1val B: [24014]
        complexed with ca, mn, png
      3. 2042359Domain d1valc_: 1val C: [24015]
        complexed with ca, mn, png
      4. 2042360Domain d1vald_: 1val D: [24016]
        complexed with ca, mn, png
    41. Domains for 1vam:
      1. 2042325Domain d1vama_: 1vam A: [24002]
        complexed with ca, mn, pna
      2. 2042326Domain d1vamb_: 1vam B: [24003]
        complexed with ca, mn, pna
      3. 2042327Domain d1vamc_: 1vam C: [24004]
        complexed with ca, mn, pna
      4. 2042328Domain d1vamd_: 1vam D: [24005]
        complexed with ca, mn, pna
    42. Domains for 1vln:
      1. 2042285Domain d1vlna_: 1vln A: [23963]
        complexed with ca, mn
      2. 2042286Domain d1vlnb_: 1vln B: [23964]
        complexed with ca, mn
      3. 2042287Domain d1vlnc_: 1vln C: [23965]
        complexed with ca, mn
      4. 2042288Domain d1vlnd_: 1vln D: [23966]
        complexed with ca, mn
      5. 2042289Domain d1vlne_: 1vln E: [23967]
        complexed with ca, mn
      6. 2042290Domain d1vlnf_: 1vln F: [23968]
        complexed with ca, mn
      7. 2042291Domain d1vlng_: 1vln G: [23969]
        complexed with ca, mn
      8. 2042292Domain d1vlnh_: 1vln H: [23970]
        complexed with ca, mn
    43. Domain for 1xqn:
    44. Domain for 2cna:
    45. Domain for 2ctv:
    46. Domain for 2enr:
    47. Domain for 2uu8:
    48. Domain for 2yz4:
    49. Domain for 3cna:
    50. Domains for 3d4k:
      1. 2042235Domain d3d4ka_: 3d4k A: [173677]
        automated match to d1apna_
        complexed with ca, gol, h1m, man, mn
      2. 2042236Domain d3d4kb_: 3d4k B: [173678]
        automated match to d1apna_
        complexed with ca, gol, h1m, man, mn
      3. 2042237Domain d3d4kc_: 3d4k C: [173679]
        automated match to d1apna_
        complexed with ca, gol, h1m, man, mn
      4. 2042238Domain d3d4kd_: 3d4k D: [173680]
        automated match to d1apna_
        complexed with ca, gol, h1m, man, mn
    51. Domains for 3enr:
      1. 2042301Domain d3enra_: 3enr A: [23987]
        Zinc-calcium substituted
        complexed with ca, zn
      2. 2042302Domain d3enrb_: 3enr B: [23988]
        Zinc-calcium substituted
        complexed with ca, zn
    52. Domains for 3nwk:
      1. 2042255Domain d3nwka_: 3nwk A: [214061]
        automated match to d1nlsa_
        complexed with ca, gol, mn
      2. 2042256Domain d3nwkb_: 3nwk B: [214062]
        automated match to d1nlsa_
        complexed with ca, gol, mn
      3. 2042257Domain d3nwkc_: 3nwk C: [214063]
        automated match to d1nlsa_
        complexed with ca, gol, mn
      4. 2042258Domain d3nwkd_: 3nwk D: [214064]
        automated match to d1nlsa_
        complexed with ca, gol, mn
    53. Domains for 4p9w:
      1. 2042273Domain d4p9wa_: 4p9w A: [259246]
        automated match to d1nlsa_
        complexed with ca, mn, r3m
      2. 2042274Domain d4p9wb_: 4p9w B: [259249]
        automated match to d1nlsa_
        complexed with ca, mn, r3m
      3. 2042275Domain d4p9wc_: 4p9w C: [259250]
        automated match to d1nlsa_
        complexed with ca, mn, r3m
      4. 2042276Domain d4p9wd_: 4p9w D: [259252]
        automated match to d1nlsa_
        complexed with ca, mn, r3m
    54. Domains for 4p9x:
      1. 2042329Domain d4p9xa_: 4p9x A: [259268]
        automated match to d1nlsa_
        complexed with ca, mn, r3g
      2. 2042330Domain d4p9xb_: 4p9x B: [259262]
        automated match to d1nlsa_
        complexed with ca, mn, r3g
      3. 2042331Domain d4p9xc_: 4p9x C: [259263]
        automated match to d1nlsa_
        complexed with ca, mn, r3g
      4. 2042332Domain d4p9xd_: 4p9x D: [259264]
        automated match to d1nlsa_
        complexed with ca, mn, r3g
    55. Domains for 4p9y:
      1. 2042267Domain d4p9ya_: 4p9y A: [259248]
        automated match to d1nlsa_
        complexed with 2ko, ca, mn
      2. 2042268Domain d4p9yb_: 4p9y B: [259247]
        automated match to d1nlsa_
        complexed with 2ko, ca, mn
    56. Domains for 4pf5:
      1. 2042270Domain d4pf5a_: 4pf5 A: [261890]
        automated match to d1nlsa_
        complexed with edo, m3n, mn
      2. 2042271Domain d4pf5b_: 4pf5 B: [261887]
        automated match to d1nlsa_
        complexed with edo, m3n, mn
    57. Domains for 5cna:
      1. 2042261Domain d5cnaa_: 5cna A: [23947]
        complexed with ca, cl, mma, mn
      2. 2042262Domain d5cnab_: 5cna B: [23948]
        complexed with ca, cl, mma, mn
      3. 2042263Domain d5cnac_: 5cna C: [23949]
        complexed with ca, cl, mma, mn
      4. 2042264Domain d5cnad_: 5cna D: [23950]
        complexed with ca, cl, mma, mn
    58. Domain for 5o6n:
    59. Domain for 5wey:

More info for Protein Concanavalin A from b.29.1.1: Legume lectins

Timeline for Protein Concanavalin A from b.29.1.1: Legume lectins: