SCOPe 2.08: Domain d1apnb_: 1apn B:

Lineage for d1apnb_ (1apn B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families)

5. Family b.29.1.1: Legume lectins [49900] (5 proteins)

6. Protein Concanavalin A [49901] (4 species)
   natural circle permutation: the "old" N- and C-termini are linked with a peptide bond, whereas the "new" ones correspond to a cleaved loop

7. Species Jack bean (Canavalia ensiformis) [TaxId:3823] [49902] (74 PDB entries)
   Uniprot P81461

8. Domain d1apnb_: 1apn B: [23962]
   demetallized, pH 5

Details for d1apnb_

PDB Entry: 1apn, 2.5 Å

PDB Description: the crystallographic structure of metal-free concanavalin a at 2.5 angstroms resolution

PDB Compounds: (B:) concanavalin a

SCOPe Domain Sequences for d1apnb_:

Sequence, based on SEQRES records:

>d1apnb_ b.29.1.1 (B:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan

Sequence, based on observed residues (ATOM records):

>d1apnb_ b.29.1.1 (B:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}
adtivaveldtypnsyphigidiksvrskktakwnmqngkvgtahiiynsvdkrlsavvs
ypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnsthetnal
hfmfnqfskdqkdlilqgdattgtdgnleltrvqgssvgralfyapvhiwessavvasfe
atftflikspdshpadgiaffisnidssipsgstgrllglfpdan

Timeline for d1apnb_:

• d1apnb_ first appeared (with stable ids) in SCOP 1.55
  
• d1apnb_ appears in SCOPe 2.07