Lineage for d1apnb_ (1apn B:)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families) (S)
  5. Family b.29.1.1: Legume lectins [49900] (5 proteins)
  6. Protein Concanavalin A [49901] (4 species)
    natural circle permutation: the "old" N- and C-termini are linked with a peptide bond, whereas the "new" ones correspond to a cleaved loop
  7. Species Jack bean (Canavalia ensiformis) [TaxId:3823] [49902] (74 PDB entries)
    Uniprot P81461
  8. Domain d1apnb_: 1apn B: [23962]
    demetallized, pH 5

Details for d1apnb_

PDB Entry: 1apn (more details), 2.5 Å

PDB Description: the crystallographic structure of metal-free concanavalin a at 2.5 angstroms resolution
PDB Compounds: (B:) concanavalin a

SCOPe Domain Sequences for d1apnb_:

Sequence, based on SEQRES records: (download)

>d1apnb_ b.29.1.1 (B:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan

Sequence, based on observed residues (ATOM records): (download)

>d1apnb_ b.29.1.1 (B:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}
adtivaveldtypnsyphigidiksvrskktakwnmqngkvgtahiiynsvdkrlsavvs
ypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnsthetnal
hfmfnqfskdqkdlilqgdattgtdgnleltrvqgssvgralfyapvhiwessavvasfe
atftflikspdshpadgiaffisnidssipsgstgrllglfpdan

SCOPe Domain Coordinates for d1apnb_ are not available.

Timeline for d1apnb_:

Domains from other chains:
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d1apna_