Lineage for Protein: Programmed cell death protein 1, PD1, extracellular domain

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2741861Protein Programmed cell death protein 1, PD1, extracellular domain [101510] (2 species)

Species:

  1. 2741862Human (Homo sapiens) [TaxId:9606] [256383] (17 PDB entries)
    1. Domain for 2m2d:
    2. Domain for 4zqk:
    3. Domains for 5b8c:
      1. 2741870Domain d5b8cc1: 5b8c C:32-146 [324456]
        Other proteins in same PDB: d5b8ca_, d5b8cb_, d5b8cc2, d5b8cd_, d5b8ce_, d5b8cf2, d5b8cg_, d5b8ch_, d5b8ci2, d5b8cj_, d5b8ck_, d5b8cl2
        automated match to d3bikc_
      2. 2741871Domain d5b8cf1: 5b8c F:32-146 [324353]
        Other proteins in same PDB: d5b8ca_, d5b8cb_, d5b8cc2, d5b8cd_, d5b8ce_, d5b8cf2, d5b8cg_, d5b8ch_, d5b8ci2, d5b8cj_, d5b8ck_, d5b8cl2
        automated match to d3bikc_
      3. 2741872Domain d5b8ci1: 5b8c I:32-146 [324425]
        Other proteins in same PDB: d5b8ca_, d5b8cb_, d5b8cc2, d5b8cd_, d5b8ce_, d5b8cf2, d5b8cg_, d5b8ch_, d5b8ci2, d5b8cj_, d5b8ck_, d5b8cl2
        automated match to d3bikc_
      4. 2741873Domain d5b8cl1: 5b8c L:32-146 [324422]
        Other proteins in same PDB: d5b8ca_, d5b8cb_, d5b8cc2, d5b8cd_, d5b8ce_, d5b8cf2, d5b8cg_, d5b8ch_, d5b8ci2, d5b8cj_, d5b8ck_, d5b8cl2
        automated match to d3bikc_
    4. Domains for 5ius:
      1. 2741883Domain d5iusa1: 5ius A:29-146 [323349]
        Other proteins in same PDB: d5iusa2, d5iusb2
        automated match to d3rrqa_
        complexed with cl; mutant
      2. 2741884Domain d5iusb1: 5ius B:30-146 [323347]
        Other proteins in same PDB: d5iusa2, d5iusb2
        automated match to d3rrqa_
        complexed with cl; mutant
    5. Domains for 5jxe:
      1. 2741885Domain d5jxea_: 5jxe A: [321118]
        Other proteins in same PDB: d5jxec1, d5jxec2, d5jxef1, d5jxef2
        automated match to d4zqkb_
      2. 2741886Domain d5jxeb_: 5jxe B: [321151]
        Other proteins in same PDB: d5jxec1, d5jxec2, d5jxef1, d5jxef2
        automated match to d4zqkb_
    6. Domain for 5wt9:
    7. Domain for 6j14:
    8. Domains for 6j15:
      1. 2741875Domain d6j15c1: 6j15 C:32-147 [376351]
        Other proteins in same PDB: d6j15a1, d6j15a2, d6j15b1, d6j15b2, d6j15c2, d6j15d2, d6j15h1, d6j15h2, d6j15l1, d6j15l2
        automated match to d3bikc_
        complexed with nag
      2. 2741876Domain d6j15d1: 6j15 D:32-147 [376360]
        Other proteins in same PDB: d6j15a1, d6j15a2, d6j15b1, d6j15b2, d6j15c2, d6j15d2, d6j15h1, d6j15h2, d6j15l1, d6j15l2
        automated match to d3bikc_
        complexed with nag
    9. Domain for 6jbt:
    10. Domains for 6jjp:
      1. 2741878Domain d6jjpc_: 6jjp C: [376362]
        Other proteins in same PDB: d6jjpa_, d6jjpb1, d6jjpb2, d6jjpd_, d6jjpe1, d6jjpe2
        automated match to d5wt9g_
        complexed with nag
      2. 2741879Domain d6jjpf_: 6jjp F: [376405]
        Other proteins in same PDB: d6jjpa_, d6jjpb1, d6jjpb2, d6jjpd_, d6jjpe1, d6jjpe2
        automated match to d5wt9g_
        complexed with nag
    11. Domain for 6k0y:
    12. Domain for 6umt:
    13. Domain for 6umu:
    14. Domain for 6umv:
    15. Domain for 6xkr:
    16. Domains for 7cu5:
      1. 2741880Domain d7cu5e_: 7cu5 E: [390061]
        Other proteins in same PDB: d7cu5a1, d7cu5a2, d7cu5b1, d7cu5b2
        automated match to d3bikc_
        complexed with nag
      2. 2741881Domain d7cu5q_: 7cu5 Q: [390059]
        Other proteins in same PDB: d7cu5a1, d7cu5a2, d7cu5b1, d7cu5b2
        automated match to d3bikc_
        complexed with nag
    17. Domain for 7e9b:
  2. 2741888Mouse (Mus musculus) [TaxId:10090] [101511] (5 PDB entries)
    1. Domain for 1npu:
    2. Domains for 3bik:
      1. 2741892Domain d3bikb_: 3bik B: [155309]
        automated match to d1npua_
        complexed with gol
      2. 2741893Domain d3bikc_: 3bik C: [155310]
        automated match to d1npua_
        complexed with gol
    3. Domain for 3bp5:
    4. Domain for 3bp6:
    5. Domains for 3sbw:
      1. 2741894Domain d3sbwa_: 3sbw A: [227336]
        automated match to d3bp6a_
        mutant
      2. 2741895Domain d3sbwb_: 3sbw B: [196327]
        automated match to d1npua_
        mutant

More info for Protein Programmed cell death protein 1, PD1, extracellular domain from b.1.1.1: V set domains (antibody variable domain-like)

Timeline for Protein Programmed cell death protein 1, PD1, extracellular domain from b.1.1.1: V set domains (antibody variable domain-like):

  • Protein Programmed cell death protein 1, PD1, extracellular domain from b.1.1.1: V set domains (antibody variable domain-like) first appeared in SCOP 1.67
  • Protein Programmed cell death protein 1, PD1, extracellular domain from b.1.1.1: V set domains (antibody variable domain-like) appears in SCOPe 2.07