Lineage for Species: Human (Homo sapiens), alpha-chain [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2745637Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 2749668Protein T-cell antigen receptor [49125] (7 species)
  7. 2749669Species Human (Homo sapiens), alpha-chain [TaxId:9606] [49127] (26 PDB entries)

PDB entries in Species: Human (Homo sapiens), alpha-chain [TaxId: 9606]:

  1. Domain(s) for 1bd2:
  2. Domain(s) for 1fyt:
  3. Domain(s) for 1j8h:
  4. Domain(s) for 1kgc:
  5. Domain(s) for 1mi5:
  6. Domain(s) for 1oga:
  7. Domain(s) for 1qrn:
  8. Domain(s) for 1qse:
  9. Domain(s) for 1qsf:
  10. Domain(s) for 2ak4:
    1. 2749685Domain d2ak4d2: 2ak4 D:117-206 [144809]
      Other proteins in same PDB: d2ak4a1, d2ak4a2, d2ak4b_, d2ak4d1, d2ak4e1, d2ak4f1, d2ak4f2, d2ak4g_, d2ak4i1, d2ak4j1, d2ak4k1, d2ak4k2, d2ak4l_, d2ak4n1, d2ak4p1, d2ak4q1, d2ak4q2, d2ak4r_, d2ak4t1, d2ak4u1
      complexed with iod
      missing some secondary structures that made up less than one-third of the common domain
    2. 2749686Domain d2ak4i2: 2ak4 I:117-206 [144813]
      Other proteins in same PDB: d2ak4a1, d2ak4a2, d2ak4b_, d2ak4d1, d2ak4e1, d2ak4f1, d2ak4f2, d2ak4g_, d2ak4i1, d2ak4j1, d2ak4k1, d2ak4k2, d2ak4l_, d2ak4n1, d2ak4p1, d2ak4q1, d2ak4q2, d2ak4r_, d2ak4t1, d2ak4u1
      automatically matched to 2AK4 D:117-206
      complexed with iod

      missing some secondary structures that made up less than one-third of the common domain
    3. 2749687Domain d2ak4n2: 2ak4 N:117-206 [144817]
      Other proteins in same PDB: d2ak4a1, d2ak4a2, d2ak4b_, d2ak4d1, d2ak4e1, d2ak4f1, d2ak4f2, d2ak4g_, d2ak4i1, d2ak4j1, d2ak4k1, d2ak4k2, d2ak4l_, d2ak4n1, d2ak4p1, d2ak4q1, d2ak4q2, d2ak4r_, d2ak4t1, d2ak4u1
      automatically matched to 2AK4 D:117-206
      complexed with iod

      missing some secondary structures that made up less than one-third of the common domain
    4. 2749688Domain d2ak4t2: 2ak4 T:117-206 [144821]
      Other proteins in same PDB: d2ak4a1, d2ak4a2, d2ak4b_, d2ak4d1, d2ak4e1, d2ak4f1, d2ak4f2, d2ak4g_, d2ak4i1, d2ak4j1, d2ak4k1, d2ak4k2, d2ak4l_, d2ak4n1, d2ak4p1, d2ak4q1, d2ak4q2, d2ak4r_, d2ak4t1, d2ak4u1
      automatically matched to 2AK4 D:117-206
      complexed with iod

      missing some secondary structures that made up less than one-third of the common domain
  11. Domain(s) for 2bnq:
  12. Domain(s) for 2bnr:
  13. Domain(s) for 2cde:
    1. 2749706Domain d2cdea2: 2cde A:116-193 [145028]
      Other proteins in same PDB: d2cdea1, d2cdeb1, d2cded1, d2cdef1
      missing some secondary structures that made up less than one-third of the common domain
    2. 2749707Domain d2cdec1: 2cde C:2-115 [145029]
      Other proteins in same PDB: d2cdea1, d2cdeb1, d2cded1, d2cdef1
      automatically matched to 2CDE A:2-115
      missing some secondary structures that made up less than one-third of the common domain
    3. 2749708Domain d2cdec2: 2cde C:116-193 [145030]
      Other proteins in same PDB: d2cdea1, d2cdeb1, d2cded1, d2cdef1
      automatically matched to 2CDE A:116-193
      missing some secondary structures that made up less than one-third of the common domain
    4. 2749709Domain d2cdee1: 2cde E:2-115 [145031]
      Other proteins in same PDB: d2cdea1, d2cdeb1, d2cded1, d2cdef1
      automatically matched to 2CDE A:2-115
      missing some secondary structures that made up less than one-third of the common domain
    5. 2749710Domain d2cdee2: 2cde E:116-193 [145032]
      Other proteins in same PDB: d2cdea1, d2cdeb1, d2cded1, d2cdef1
      automatically matched to 2CDE A:116-193
      missing some secondary structures that made up less than one-third of the common domain
  14. Domain(s) for 2esv:
  15. Domain(s) for 2f53:
  16. Domain(s) for 2f54:
    1. 2749683Domain d2f54d2: 2f54 D:115-205 [145143]
      Other proteins in same PDB: d2f54a1, d2f54a2, d2f54b2, d2f54b3, d2f54d1, d2f54e1, d2f54f1, d2f54f2, d2f54g2, d2f54g3, d2f54k1, d2f54l1
      missing some secondary structures that made up less than one-third of the common domain
    2. 2749684Domain d2f54k2: 2f54 K:115-205 [145147]
      Other proteins in same PDB: d2f54a1, d2f54a2, d2f54b2, d2f54b3, d2f54d1, d2f54e1, d2f54f1, d2f54f2, d2f54g2, d2f54g3, d2f54k1, d2f54l1
      automatically matched to 2F54 D:115-205
      missing some secondary structures that made up less than one-third of the common domain
  17. Domain(s) for 3kpr:
    1. 2749701Domain d3kprd2: 3kpr D:118-206 [199646]
      Other proteins in same PDB: d3kpra1, d3kpra2, d3kprb_, d3kprd1, d3kpre1, d3kprf1, d3kprf2, d3kprg_, d3kpri1, d3kprj1
      automated match to d1mi5d2
      missing some secondary structures that made up less than one-third of the common domain
    2. 2749702Domain d3kpri2: 3kpr I:118-206 [199652]
      Other proteins in same PDB: d3kpra1, d3kpra2, d3kprb_, d3kprd1, d3kpre1, d3kprf1, d3kprf2, d3kprg_, d3kpri1, d3kprj1
      automated match to d1mi5d2
      missing some secondary structures that made up less than one-third of the common domain
  18. Domain(s) for 3kps:
  19. Domain(s) for 3pwp:
  20. Domain(s) for 3qfj:
  21. Domain(s) for 5u16:
    1. 2749678Domain d5u16e2: 5u16 E:111-198 [329968]
      Other proteins in same PDB: d5u16a1, d5u16a2, d5u16a3, d5u16b_, d5u16c1, d5u16c2, d5u16d_, d5u16e1, d5u16f1, d5u16f2, d5u16g1, d5u16h1, d5u16h2
      automated match to d2f54d2
      complexed with 7wo, cl, gol, na

      missing some secondary structures that made up less than one-third of the common domain
    2. 2749679Domain d5u16g2: 5u16 G:111-200 [329866]
      Other proteins in same PDB: d5u16a1, d5u16a2, d5u16a3, d5u16b_, d5u16c1, d5u16c2, d5u16d_, d5u16e1, d5u16f1, d5u16f2, d5u16g1, d5u16h1, d5u16h2
      automated match to d2f54d2
      complexed with 7wo, cl, gol, na

      missing some secondary structures that made up less than one-third of the common domain
  22. Domain(s) for 5u17:
    1. 2749689Domain d5u17b2: 5u17 B:111-199 [329654]
      Other proteins in same PDB: d5u17a1, d5u17a2, d5u17b1, d5u17c1, d5u17c2, d5u17c3, d5u17d1, d5u17e1, d5u17e2, d5u17f_, d5u17g1, d5u17g2, d5u17h_
      automated match to d2f54d2
      complexed with 7wp, act, gol, na

      missing some secondary structures that made up less than one-third of the common domain
    2. 2749690Domain d5u17d2: 5u17 D:111-200 [329669]
      Other proteins in same PDB: d5u17a1, d5u17a2, d5u17b1, d5u17c1, d5u17c2, d5u17c3, d5u17d1, d5u17e1, d5u17e2, d5u17f_, d5u17g1, d5u17g2, d5u17h_
      automated match to d2f54d2
      complexed with 7wp, act, gol, na

      missing some secondary structures that made up less than one-third of the common domain
  23. Domain(s) for 5u1r:
    1. 2749703Domain d5u1rb2: 5u1r B:111-200 [331536]
      Other proteins in same PDB: d5u1ra1, d5u1ra2, d5u1ra3, d5u1rb1, d5u1rc1, d5u1rc2, d5u1rc3, d5u1rd1, d5u1re1, d5u1re2, d5u1rf_, d5u1rg1, d5u1rg2, d5u1rh1, d5u1rh2
      automated match to d2f54d2
      complexed with act, dif, gol, na

      missing some secondary structures that made up less than one-third of the common domain
    2. 2749704Domain d5u1rd2: 5u1r D:111-199 [331524]
      Other proteins in same PDB: d5u1ra1, d5u1ra2, d5u1ra3, d5u1rb1, d5u1rc1, d5u1rc2, d5u1rc3, d5u1rd1, d5u1re1, d5u1re2, d5u1rf_, d5u1rg1, d5u1rg2, d5u1rh1, d5u1rh2
      automated match to d2f54d2
      complexed with act, dif, gol, na

      missing some secondary structures that made up less than one-third of the common domain
  24. Domain(s) for 5u2v:
    1. 2749692Domain d5u2ve2: 5u2v E:111-200 [329569]
      Other proteins in same PDB: d5u2va1, d5u2va2, d5u2va3, d5u2vb_, d5u2vc1, d5u2vc2, d5u2vc3, d5u2vd_, d5u2ve1, d5u2vf1, d5u2vf2, d5u2vg1, d5u2vh1, d5u2vh2
      automated match to d2f54d2
      complexed with 7wq, gol, pro

      missing some secondary structures that made up less than one-third of the common domain
    2. 2749693Domain d5u2vg2: 5u2v G:111-199 [329621]
      Other proteins in same PDB: d5u2va1, d5u2va2, d5u2va3, d5u2vb_, d5u2vc1, d5u2vc2, d5u2vc3, d5u2vd_, d5u2ve1, d5u2vf1, d5u2vf2, d5u2vg1, d5u2vh1, d5u2vh2
      automated match to d2f54d2
      complexed with 7wq, gol, pro

      missing some secondary structures that made up less than one-third of the common domain
  25. Domain(s) for 5u6q:
    1. 2749674Domain d5u6qb2: 5u6q B:111-200 [329696]
      Other proteins in same PDB: d5u6qa1, d5u6qa2, d5u6qa3, d5u6qb1, d5u6qc1, d5u6qc2, d5u6qc3, d5u6qd1, d5u6qe1, d5u6qe2, d5u6qf_, d5u6qg1, d5u6qg2, d5u6qh_
      automated match to d2f54d2
      complexed with 7zs, act, gol, na

      missing some secondary structures that made up less than one-third of the common domain
    2. 2749675Domain d5u6qd2: 5u6q D:111-200 [329651]
      Other proteins in same PDB: d5u6qa1, d5u6qa2, d5u6qa3, d5u6qb1, d5u6qc1, d5u6qc2, d5u6qc3, d5u6qd1, d5u6qe1, d5u6qe2, d5u6qf_, d5u6qg1, d5u6qg2, d5u6qh_
      automated match to d2f54d2
      complexed with 7zs, act, gol, na

      missing some secondary structures that made up less than one-third of the common domain
  26. Domain(s) for 5u72:
    1. 2749696Domain d5u72b2: 5u72 B:111-200 [329577]
      Other proteins in same PDB: d5u72a1, d5u72a2, d5u72a3, d5u72b1, d5u72c1, d5u72c2, d5u72c3, d5u72d1, d5u72e1, d5u72e2, d5u72f_, d5u72g1, d5u72g2, d5u72h_
      automated match to d2f54d2
      complexed with 7zv, act, dms, gol

      missing some secondary structures that made up less than one-third of the common domain
    2. 2749697Domain d5u72d2: 5u72 D:111-200 [329615]
      Other proteins in same PDB: d5u72a1, d5u72a2, d5u72a3, d5u72b1, d5u72c1, d5u72c2, d5u72c3, d5u72d1, d5u72e1, d5u72e2, d5u72f_, d5u72g1, d5u72g2, d5u72h_
      automated match to d2f54d2
      complexed with 7zv, act, dms, gol

      missing some secondary structures that made up less than one-third of the common domain

More info for Species Human (Homo sapiens), alpha-chain [TaxId:9606] from b.1.1.2 T-cell antigen receptor

Timeline for Species Human (Homo sapiens), alpha-chain [TaxId:9606] from b.1.1.2 T-cell antigen receptor: