Lineage for Protein: Pseudouridine synthase II TruB, C-terminal domain

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2076966Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2076967Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)
  5. 2076968Family b.122.1.1: PUA domain [88698] (6 protein domains)
    RNA-binding domain
  6. 2076991Protein Pseudouridine synthase II TruB, C-terminal domain [88699] (5 species)

Species:

  1. 2076992Escherichia coli [TaxId:562] [88700] (3 PDB entries)
    1. Domain for 1k8w:
    2. Domain for 1r3f:
    3. Domain for 1zl3:
  2. 2076996Methanococcus jannaschii [TaxId:2190] [141698] (1 PDB entry)
    Uniprot Q57612 247-331
  3. 2076998Mycobacterium tuberculosis [TaxId:1773] [102024] (2 PDB entries)
    1. Domains for 1s71:
      1. 2077001Domain d1s71a2: 1s71 A:236-292 [303044]
        Other proteins in same PDB: d1s71a1, d1s71b1
        automated match to d1sgva1
      2. 2077002Domain d1s71b2: 1s71 B:236-294 [303046]
        Other proteins in same PDB: d1s71a1, d1s71b1
        automated match to d1sgvb1
    2. Domains for 1sgv:
      1. 2076999Domain d1sgva1: 1sgv A:236-292 [98858]
        Other proteins in same PDB: d1sgva2, d1sgvb2
      2. 2077000Domain d1sgvb1: 1sgv B:236-294 [98860]
        Other proteins in same PDB: d1sgva2, d1sgvb2
  4. 2077003Pyrococcus furiosus [TaxId:2261] [141699] (2 PDB entries)
    Uniprot Q7LWY0 250-333
    1. Domains for 2ey4:
      1. 2077004Domain d2ey4a1: 2ey4 A:253-336 [132578]
        Other proteins in same PDB: d2ey4a2, d2ey4b2, d2ey4c1, d2ey4d_, d2ey4e1, d2ey4f_
        complexed with zn
      2. 2077005Domain d2ey4b1: 2ey4 B:253-336 [132580]
        Other proteins in same PDB: d2ey4a2, d2ey4b2, d2ey4c1, d2ey4d_, d2ey4e1, d2ey4f_
        automated match to d2ey4a1
        complexed with zn
    2. Domain for 2hvy:
  5. 2077007Thermotoga maritima [TaxId:2336] [102023] (4 PDB entries)
    1. Domain for 1r3e:
    2. Domains for 1ze1:
      1. 2077010Domain d1ze1a1: 1ze1 A:229-308 [124962]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automated match to d1r3ea1
        complexed with mg
      2. 2077011Domain d1ze1b1: 1ze1 B:229-308 [124964]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automated match to d1r3ea1
        complexed with mg
      3. 2077012Domain d1ze1c1: 1ze1 C:229-308 [124966]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automated match to d1r3ea1
        complexed with mg
      4. 2077013Domain d1ze1d1: 1ze1 D:229-308 [124968]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automated match to d1r3ea1
        complexed with mg
    3. Domains for 1ze2:
      1. 2077014Domain d1ze2a1: 1ze2 A:229-308 [124970]
        Other proteins in same PDB: d1ze2a2, d1ze2b2
        automated match to d1r3ea1
        protein/RNA complex
      2. 2077015Domain d1ze2b1: 1ze2 B:229-308 [124972]
        Other proteins in same PDB: d1ze2a2, d1ze2b2
        automatically matched to d1r3ea1
        protein/RNA complex
    4. Domain for 2ab4:

More info for Protein Pseudouridine synthase II TruB, C-terminal domain from b.122.1.1: PUA domain

Timeline for Protein Pseudouridine synthase II TruB, C-terminal domain from b.122.1.1: PUA domain: